GABPA_OTX2
CAP-SELEX sample OTX2_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCGGAAGTCTTTAATTGGTCGCTGGTCGCAAGACCGGAAG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:2566ec7d5aa4
|
40 | — | — | — |
|
GAACGCATGCGTGCTTCCTACGGAACCGGAAGCGCTACTC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:666347a0d068
|
40 | — | — | — |
|
ACGGAAACGCTAAGAACAACGCATCACGATTGACGGAAGT
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:c095de6dfa77
|
40 | — | — | — |
|
TAACCGGAAGTACGGATAGACCCTTGCTTACGGGGGAAAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:6fbaa567326a
|
40 | — | — | — |
|
CAAATTACGATTCTTCCTGTTCGTCCCGGAAGTAGCACTA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:f3db81d436cd
|
40 | — | — | — |
|
CTCCATCCTTAACCGGAAATAGTTAATTTGTCGCGTTAAT
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:b121bdc63912
|
40 | — | — | — |
|
GTATGGGACCAACATTTCAACCATCACTTCCGGCGGATAT
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:9c97e0bd9a8b
|
40 | — | — | — |
|
GAAACTTCCGCCGGAAGGGTAACACACGTGGTCGGAAAGC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:0b2c94166d2b
|
40 | — | — | — |
|
CCGCTACTGTTATACCGGAAACGTAGTCTCCCGGAAGTAA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:bfae9ca7db2d
|
40 | — | — | — |
|
CGAGGTCTAATCGCTAACGTGCGATACTACGCACTTCCGG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:07ee2bd0c054
|
40 | — | — | — |
|
CACGCAACACGCAATATAAGATGGCATTTCCGGTCCACAT
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:c299e64943e1
|
40 | — | — | — |
|
ACACCGGAAATCCGGTAAGCGCGACGTACTGAGCTAGTAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:3b0abd780154
|
40 | — | — | — |
|
AATATTGTCCCGGATGCCAAGAATGTACACGGATATCCGC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:04ee534e1080
|
40 | — | — | — |
|
TAGAAACCGGAAATACACCCACATGTGCGCAGTTCCGGGA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:304a8cb01abf
|
40 | — | — | — |
|
TAAACCGTGACTTCCGGCGACGCCGCCACCCACCACGCGA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:a8c311e54c3d
|
40 | — | — | — |
|
AGTGACGCACTAACATTATCATCCTCTTCCGGAACTTACG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:b4b302a09dd1
|
40 | — | — | — |
|
ACGTGAATACGGTATTGGCATCCGGCGGAAAAGGCATCAG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:e1868d413ee5
|
40 | — | — | — |
|
CCGGAAGCCAACTAATCCTCATCCGACCGATGCGCTTAAT
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:439579f866c2
|
40 | — | — | — |
|
ATGAACGCTCTCAGTGCATCATCCCGACCGGAAGTCGAAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:a3939b363361
|
40 | — | — | — |
|
CCTTCTGCCGGAAATGGAAACTAAGCACAGTATATAATCC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:eeb97b343645
|
40 | — | — | — |
|
ATACCGGATGAAGCCAAAACTGAAGCGGAAGCTTGAAGGC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:29049d80ca39
|
40 | — | — | — |
|
TCCGCCGGAAACAGTTCCCACTCTCCACAATCTAAGCCAA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:585851e0e6a6
|
40 | — | — | — |
|
TACTCCATAATCTCTCATCAGGATATCCGCCCGCCCGCGA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:be484e88dd99
|
40 | — | — | — |
|
TCGTACAAACTTCACCGGATTAAATTACCCAAACCGGAAG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:2cfdadf3393a
|
40 | — | — | — |
|
CTCGTCAACCGGAAACGCTTTCCCCACTATCTTAAGCGTA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:6b6ce3f6fb89
|
40 | — | — | — |
|
CCATACAGCACCATACGGTCATGCGTATGCTGACCGGAAG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:010bdc6f4075
|
40 | — | — | — |
|
ATGCGTATTATAATGAGGTTGCACACAGGAAATAATGACA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:d3c6769213b3
|
40 | — | — | — |
|
GCACCCGACCCCCGCGCCACCCATCCCCCACCTCCACAAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:d60549713313
|
40 | — | — | — |
|
AACCCTCAAGCTACGTCCGGTACGTAAACCGGACGCAGCG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:2490d4dff9f6
|
40 | — | — | — |
|
CCCATCCACTGCCGAACGACTCCACCGAAACACAACGACG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:b854f849dda1
|
40 | — | — | — |
|
ATGGTACACTTAACGGTGCTTTAACAACTTCCGGGACACG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:a68d581dbad9
|
40 | — | — | — |
|
CAGCAGAGAGGTCCTCAAACAACCGGAAGTAGTAGGGTAA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:c86b469b360a
|
40 | — | — | — |
|
CCCGGAAGTGCCTGACTCCACAATACCCCCGACACTATCA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:3b949a37faed
|
40 | — | — | — |
|
CAAACCGGAAGCTACAGTAGATACTCTGGCCTGCCCTAGC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:5ba542ffb356
|
40 | — | — | — |
|
GTCGCGCTTACAGCCGGAAGTGTATCAACGATTGACGGCG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:b45f0bf1e619
|
40 | — | — | — |
|
TACCCTAATACCCTGAACCGTAACGCTACGCATATACGCA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:d19e70fe1702
|
40 | — | — | — |
|
TCCGGACCAATCCCCCTTCCGGTTCGCGTTCCAGCAAGCC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:cc7600ba4fe6
|
40 | — | — | — |
|
TTAACACACGCACGTGTAGACGACCTTCCGCTTACTACGA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:f3de5a21fc7d
|
40 | — | — | — |
|
GTTTAAATCCGCCGGAAGTCCAGATCACACCTGCCGACAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:505157a5d6cc
|
40 | — | — | — |
|
TACCTGTACACCTTTATAAATCCGAGTAACTTCCGCCCTG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:bd0bf8cc129a
|
40 | — | — | — |
|
TCCGTAAGAACCCACCTGCTACATGAGCATCCGGTCGAGC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:cb041571a3f0
|
40 | — | — | — |
|
CTTCCGTCGCAGTAGGTTGGCGCTTAGTAAAGTCGTTTGG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:3c97613dd291
|
40 | — | — | — |
|
TTTTTAACCCCCCATCCCATTAGCACTTCCGGCAATCGGG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:9b1dcfe021c1
|
40 | — | — | — |
|
ATACAATGCAATAGATTATAGCCACACCGGAAATGCATCC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:91b9434479dd
|
40 | — | — | — |
|
TCATGCAGACTAATCACCAAAAGAGGAAGCTAATTACCAA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:540d58fca708
|
40 | — | — | — |
|
GCCTTAGACCGGAAGCGGAGAATCCTAGCCAACCCGCTTC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:065b1561d0cd
|
40 | — | — | — |
|
GATATCCCGTTTCCCCCCAACCCAGCACGTGCCAGAACTC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:19f6b518c528
|
40 | — | — | — |
|
GCATAATTCCATCACACTTCCGGCGTCACTCTTGATCTAA
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:1ca7914cfcc2
|
40 | — | — | — |
|
CCGGAAGCGCGCTTACGCAATTCCAGACAACGAACTTAGG
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:d4761ec435b5
|
40 | — | — | — |
|
AGGGGGAAGTCAGTTGTTGGATTCTAGAAACTTCCGGTAC
PANAPTA:Q06546:GABPA_OTX2:PRJEB66722:R3:ca53ee40423b
|
40 | — | — | — |
SELEX rounds
R3 ·final