GABPA_TFE3
CAP-SELEX sample TFE3_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCCCTACATTTCCGGTACCACTTCCGGTCTACTTCTACCG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:564bd89900f5
|
40 | — | — | — |
|
AGGCCCTTCCGCCGGAAGTTGCTGCCTACGTACGCGCGAT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:63ca721c4d0a
|
40 | — | — | — |
|
ACCTGGGCCGGAAGTACGCACTGCGTAATGAGCCGGAAGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:0a9d660380df
|
40 | — | — | — |
|
ACTGTTTCCGGTCTCATAGGAGGCTTCCGGTTAACGTGGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:8aed693c6041
|
40 | — | — | — |
|
TGGCGGGCACATCCGGCTTTGTCTCAATGGCCGGATGTGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:d49069519d43
|
40 | — | — | — |
|
TAACTTCCGGCTCCGAGCAATTAGAACTTCCGGCTGAACG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:c611c88019b0
|
40 | — | — | — |
|
ATTGCATTTCCGTTAGGTTCTAACTTCGCTTCCGGTCGGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:fa8f1606b21f
|
40 | — | — | — |
|
GACGGACCGGGCGCCGTTAAGTATCGACTTCCGGCGTGGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:d569ddd2cb82
|
40 | — | — | — |
|
GAAAGCATGCTTCCGGCCGCGCGCATCGCGACCGGAAGTA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:6e706450291b
|
40 | — | — | — |
|
ACGCTCCGATGAGGTCCTTCCGGTACACGCGCTTCCGGCA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:67b277493b5b
|
40 | — | — | — |
|
AAGTCCTAACTTCCGGCCCGGTCAAACATGGTAATGCAGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:22b8753a94ce
|
40 | — | — | — |
|
AAATAGTGACGAAATCCACTTCCGGCAACTTCCGGTCCAG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:a19457f36f69
|
40 | — | — | — |
|
TCCGGTGTACGCAAGTGCACATCCGGCATGCTACTACGCC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:99a64c5cfbb1
|
40 | — | — | — |
|
CGATATCCGGAATGGTTAACAGGAAGTGGTTGTATCTAAG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:db8f0736edb6
|
40 | — | — | — |
|
ATCCGGTTTGACTTCCGTCTTCCAAGGCGATGTTGAATCC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:40205788c759
|
40 | — | — | — |
|
TCCGCTAAGTCCGTAGACTTCCGGTGCATAACGAAAGCGC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:2acf7b644c17
|
40 | — | — | — |
|
GCTGAGCGAGACCGGAAAGACGACGCACGGAAACGGAAGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:1870102c0e93
|
40 | — | — | — |
|
AAACCGGAAGTCCTAACTACGGTCGACTTTCCGGTTCCAA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:ce87a0284eb5
|
40 | — | — | — |
|
GTCACGCGCGAAACTAATGCTAGTTCCGGTGTGCCATTCG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:39d1e89cd62a
|
40 | — | — | — |
|
ACCGGATGGTGCGTAGCTGAACGGAAGTATTAGTGTGTTT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:ee2afd9f9057
|
40 | — | — | — |
|
TACCGCAATAACACCGGATATCCGGTCTACCTAGATTACC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:0cf2a44d33a7
|
40 | — | — | — |
|
GAACAAACCGGAAGTGTATGCAGCGGTAGAAAAGTACACC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:139d32038ac8
|
40 | — | — | — |
|
GGTCCAATTTCCGCCGGAAATAATACATCGTGTCGGCATC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:25968fae80e5
|
40 | — | — | — |
|
GTCGCCACCAATTTCCGGTGCTCGCGCCAGACGGAAGTGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:c6a48a74b8ee
|
40 | — | — | — |
|
AAGAACGGGAAAAGGATAAGACAAACGGAAGTAAAGGGAC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:db81572a3c6b
|
40 | — | — | — |
|
GACTTCCGGTCCACTTCCTGTACCTATTATACAACATTGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:a81470c3f22f
|
40 | — | — | — |
|
CACTGAAAGCGGAAGTGAGACGATTTTTTAAAACGGAAGC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:3280280704f1
|
40 | — | — | — |
|
AGACCCGGAAGGGGTCGAGAACGCTTAGAACATCCGGCGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:0b5ddc4b9fa9
|
40 | — | — | — |
|
GGAGCCCGGAAACGGAAGTGTTGCGTCCCCCGTCACCAAC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:61bafdfac62b
|
40 | — | — | — |
|
CTGACCACTGAAACGAGCATCCGCCGAAACCGGAAGTGCC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:6e1a929a494a
|
40 | — | — | — |
|
CTCTGCCCGTAAGTAGTTTTTTGCTACTTCCGGTCAATAT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:66f3a0adafc1
|
40 | — | — | — |
|
ACAATCGCCACAACGTAAGTCCGGACACACTTCCGGTGGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:a778860ee578
|
40 | — | — | — |
|
AAGACTCAAAGATACCGTAAAGTTTCCGTCCGGTTCTTGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:ef0d70d20cc8
|
40 | — | — | — |
|
GCCGGAAGTGATGCAGAACTCGCCATTAACGCGATTACGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:e4b4dff69b86
|
40 | — | — | — |
|
TTGCGCGACTTCCGGTACCTATGTTCATCCTGTAGGTACT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:a67f4ec6af1d
|
40 | — | — | — |
|
CATTTAGAAGGGCGGAAATGAACCGGAAGTACTGAATGGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:20285aa4ef38
|
40 | — | — | — |
|
GAGCTCGTCTACAGCCATCTATGACCGGAAGTGGAGCGGA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:80a88d3e9e7a
|
40 | — | — | — |
|
GCAGTCAACGGAAGGTAATATGCAATGCGTTGTATACCGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:470117f8368a
|
40 | — | — | — |
|
GGAAAACCGGAAGCGTAACTGCCGCCGGAACAAGAACCGC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:42b16f7dc470
|
40 | — | — | — |
|
ACGACTCCGCATGATCATTTCCGCTTCCTTGAATTTCCGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:79207d12b6b8
|
40 | — | — | — |
|
TCCGACACGGTTTCCTGTTCCGGTCTGCCCGTTGCGTGAC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:83cbe6dca7e4
|
40 | — | — | — |
|
GCCAGACAGGATATCCGGCATCACGCCGCTCGGGCCCCCC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:7ff577af85d2
|
40 | — | — | — |
|
TTTGGGCGTTTCCGTCGGCACTCCTTACTTCCGGCTTGCC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:b0387708d330
|
40 | — | — | — |
|
GCATCCTGTAGTTTCCGGTACGGGCCTGATGCTTCACCGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:ecd2b4f09164
|
40 | — | — | — |
|
TTCGCCATTACCTACTTCCGGTCCTCTCCGTGTTGGACGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:20a24902b901
|
40 | — | — | — |
|
TTCCGGGTTGCCCTACATCCGGCCCGGAAGTGATGAAAGC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:4f5d574fbb87
|
40 | — | — | — |
|
CAGTCTGACCGGAAACGAACGTTAAACCCTTAATACGACA
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:b6a696381614
|
40 | — | — | — |
|
TTGACGTACCATTCCTTCCGTGATTCGAGCCGGAAGTTGT
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:6cb06403e704
|
40 | — | — | — |
|
GCCTACTTCCTTCCGGTCGCCCTCTTAATCCCCCAAGCGC
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:bc5845378c40
|
40 | — | — | — |
|
GGATAGAGTACGAGACTTCCTCCGGAAGTAGATTGAACGG
PANAPTA:Q06546:GABPA_TFE3:PRJEB66722:R3:6da79119e0a0
|
40 | — | — | — |
SELEX rounds
R3 ·final