GABPA_USF2
CAP-SELEX sample USF2_GABPA · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGTATTAAACGACTTCCGGCCTCCACTTCCGGTCACGTGG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:e0de70a780c4
|
40 | — | — | — |
|
TTTCACATCCGCTTCTGCTTCCGCTAACCGGAAACACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:a90542d1a353
|
40 | — | — | — |
|
TAACAGCACGGTCGACTTCCGGTCACGTGCATCGTCGGTC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:b694930de050
|
40 | — | — | — |
|
CTGTGCACTTCCGGTCCGTTATGGCCGAACGCACGTGACC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:d6c780a7b878
|
40 | — | — | — |
|
GAAGTCAGGCCAACAGTGGTATGCCACGTGCTTCCGCTCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:5b90b37124fd
|
40 | — | — | — |
|
CAACACGTGACCGGATATCCGGTTCGTCCAGCATGTCGTA
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:e558a3f59406
|
40 | — | — | — |
|
CCGGAAGGACGGGGCTGTCAGCCAGCATGTGACCGGAAGT
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:e86b6d03f6c6
|
40 | — | — | — |
|
GTACCACTCTTCCGGTCCCGTGACGACATACTTCCGGTTC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:7a1925c62e4c
|
40 | — | — | — |
|
ACATTCCTTCCGCCGGAAACACTACTGCATCACGTGATAC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:05c0e35e54b9
|
40 | — | — | — |
|
AGACGGACCAGTCTCCACTTCCGGTCACATGTCAGCTCCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:7c71d2580c06
|
40 | — | — | — |
|
CAACAACTTCCGGTCACGTGTATCGCTATCAACCCACCCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:89a73e0951df
|
40 | — | — | — |
|
GAAGTATAAGGAAGCATGTGACCGGAAGTCGCGTATATGG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:01197dd3868a
|
40 | — | — | — |
|
AGCAGGGCCCCCGCCCACTTCCGGTCACGTGCCGTTCTCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:53517d9d28b4
|
40 | — | — | — |
|
ACACCGGAAACGGAAGCAGCACAGGCCGCCCTCGTGACCA
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:07de1d688330
|
40 | — | — | — |
|
GAAACACGTGTATCTCCACTTCCGGTCCCCACCTGGCAGT
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:cacef6e7d2f9
|
40 | — | — | — |
|
GAAGTGCTCATCTCCCCCCGAACCACTTCCGGTCACGAGG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:fad71278f9fc
|
40 | — | — | — |
|
CACGTGACTAACCGCCGACGCCGTACTTCCGCTTCCGTTT
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:e0c06a1bb842
|
40 | — | — | — |
|
CACTCCTCACTTCCGGTCACGTGCCACCTGTAAAGCGGCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:b55cb6a283e4
|
40 | — | — | — |
|
TCGCAAACCGGAAGTGCACATCCGGGCACATGACCCGCCG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:0a4b19922c99
|
40 | — | — | — |
|
TCCCTATATACCCATTTCCGGTTCCGGTCCAGATCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:44234deb67cd
|
40 | — | — | — |
|
ATCTACATGTGACCACCCTCACTTCCGGCCACACTTCCGG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:310d9f0e4105
|
40 | — | — | — |
|
CACCCACTTCCGGTCACGTCTACCAACGGCCCACGTGACG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:00dac8cfad3f
|
40 | — | — | — |
|
CCTACTTCCGCCTAGCACTTCCGGCCCAGACCATGTGATC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:879f529e6229
|
40 | — | — | — |
|
GACCGCTCTTCCGTTTCCGGTATCGTTACAACATCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:00652e5b53b7
|
40 | — | — | — |
|
AACCCACTTCCGGTCACATGTCCTACCTCGCCAAGCCACC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:26bb18230ba2
|
40 | — | — | — |
|
TGCACGTGACCTGCGTGACACTTCCGGTACACGACCCTAC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:27378cd67365
|
40 | — | — | — |
|
TATCCGGTGCTTGACCCTCGTCATGGCCACGTGACCGGAA
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:faa0ac73cf69
|
40 | — | — | — |
|
GATACACGTGTTTCCTGCCCTAACCGGAAGTTACCTACCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:b735d00d74e3
|
40 | — | — | — |
|
AGTCACTTCCGGTCACATGCCGCGCTGCGCCCTCAGGGGG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:492ce2788b58
|
40 | — | — | — |
|
AGCACTTCCGGTCGACTTCCACCACGTGATCCCCCTGTGC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:48633a2ba05a
|
40 | — | — | — |
|
GAGGAGCAGCCCGAACCACTACGTCACTTCCGGTCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:c99cb964bdfe
|
40 | — | — | — |
|
ACCCAGCGACTACTTCCGGCGGAAGCGCTCACACCACATG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:49fcf20621e0
|
40 | — | — | — |
|
ACTTCCGGTGGAATCCCGCTACCGGATGTCACATGGCACC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:0dc343915cc3
|
40 | — | — | — |
|
TATACCGCGCGTACTTCCGGTCACGTGTCCTGACGCGGAT
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:8dfac7e0ae59
|
40 | — | — | — |
|
CAGCATCCGGTCACGTGCCGCACACCATGTGCACGTGGCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:0eaf39703de7
|
40 | — | — | — |
|
CCGGACGATACGACTTCCGGCAACACTCAACACCACCCAC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:2655bdf93718
|
40 | — | — | — |
|
TCATCACGTGATCTTAACCCGTTACTTCCGGCGGATGTTA
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:66368ce253f9
|
40 | — | — | — |
|
ACTTCCGGTTCGGCTGGCATGTGACTTCCGCTTCCGGCCG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:a4eac6944d23
|
40 | — | — | — |
|
AATGCCTTTTCCTCGGTACTTCCGGTCACGTGCGGTCACC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:74b5b6dbcef1
|
40 | — | — | — |
|
CTACTACGTCACGTGATTTCCTGTTTGACTTCCGGTTACC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:5999fb672329
|
40 | — | — | — |
|
CCGGAAGTAGTAAACATCCCACGTGACCACTTCCGCTATT
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:1f6ba446b3ec
|
40 | — | — | — |
|
GATCATCCACTTCCGGTTGCTTGTCGCCAACACGTGACCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:0e569f1b8844
|
40 | — | — | — |
|
TCAGCGTGACAGTCCCACTTCCGGTTACAGATCACACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:58405e88e919
|
40 | — | — | — |
|
ACGACATACCGGAAGTGCACCATACAACCATCACGTGTCG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:b1d04efc8043
|
40 | — | — | — |
|
TATCGCACTTCCGGTCATTACATCACAAGACAGTCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:dcbdad5eabdc
|
40 | — | — | — |
|
GGAACACCACTTCCGGTTGTCCTGGAAAACGAACCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:41bcde56c861
|
40 | — | — | — |
|
CGCACGTGACCGGAACCTAACCATCGCCCCCTTCCGGTCC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:2f8d3f14ad9f
|
40 | — | — | — |
|
CACGTGATCGCCATGAGCCCGGATACGCTACCGGAAGTCG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:f9e279d5a9ec
|
40 | — | — | — |
|
CACCTATACCGGAAGTGCGCTAGCATTGTCCGAGCACGTG
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:9a466646a707
|
40 | — | — | — |
|
GGATCGCCTCGTTAAATGCACTTTACTTCCGGTCACGTGC
PANAPTA:Q06546:GABPA_USF2:PRJEB66722:R3:8e91e138bd19
|
40 | — | — | — |
SELEX rounds
R3 ·final