GCM1_LMX1B
CAP-SELEX sample LMX1B_GCM1; Mixture-SELEX sample LMX1B_GCM1 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CATACTTGACATACCACGCAATAGGCTAGGACCTCCTCCA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:0e9e5904f148
|
40 | — | — | — |
|
CGTTGGTGAAAGTTTGGAATTCCAATACATTACTAGCCGT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:c898d1cd0293
|
40 | — | — | — |
|
CCCTAGTGCACAAGCAGAAACGTAGCCTGCAATCCACAAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:303c6874567b
|
40 | — | — | — |
|
CACGATGCGTGTAATTAATCCGCGTATCGCGTGTTAATTA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:e957b5665691
|
40 | — | — | — |
|
CCATGTACAGAGAAATAGTTGCGATTTCTGACATTCCAGT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:a85e0ec460f2
|
40 | — | — | — |
|
CCGCCCTGATGTCGCAGCCGCGTTAATTAAGGCATACCAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:43aa9f866d03
|
40 | — | — | — |
|
AATAAATGCATAGTTAAAATACCACTCCCCGTCGGCGGGA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:0bf2989458f8
|
40 | — | — | — |
|
ATCTGATGCGTTAATTACCCCCAGCCATGACGTGCCTTGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:489c5faabf3b
|
40 | — | — | — |
|
GCTCATTAATACATGACGTTAATGAGTACCTAGCCAGCAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:e4153b06b08c
|
40 | — | — | — |
|
CGCCACTTAATTAAAATTACACCTTCATCGCACCGACAGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:9a16a8513e8d
|
40 | — | — | — |
|
CCTTATTAACGGTTGCCCTCGTTAATAACCGCCAACCATC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:0125ac56f57d
|
40 | — | — | — |
|
ATTAATTTTCGGTGCCGCTTGGTAGCACCCGTTATACCAG
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:b802cbf59ee7
|
40 | — | — | — |
|
TTTCAGAAATTCAAAGTACGAAACTACACGCTATGCCTTT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:f70f3a385c64
|
40 | — | — | — |
|
ATAGGGGAACGTAATTAACAGTTTTAGGCCATGTATGTCC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:11c14a9834ad
|
40 | — | — | — |
|
ATTAAATCAACTTGGTTACAATTGGCAAGGGCACCATCAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:95a1154630cd
|
40 | — | — | — |
|
CACTAGCCCTTACGACCGCTACGGCTAATTGCGCTTAATG
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:c66f09c1f1a3
|
40 | — | — | — |
|
AAGCATGAATAATGATGCGACTATGCGCAATTATTTGGTA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:8faeebba1361
|
40 | — | — | — |
|
ATTAATGGCGATTCCTTACGTCCCTAACCCGTGCCACCCC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:681fbfcc2d7c
|
40 | — | — | — |
|
ATTACCTACACAAGACTGTTATGACCCCCAGTACCTACGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:42ebf775f5fb
|
40 | — | — | — |
|
CCGCCATATCCAATGATCAGTGTTGCCCTCACCCGCATCG
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:0497a7c19827
|
40 | — | — | — |
|
CCAGTACGCCCTCAGAAAGAATGGCCATCTTAATTACCGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:ccdd1a0a8d68
|
40 | — | — | — |
|
CCGGCATCCGCCAGCACCCCTATGCCCCAACCGCCTGACC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:3b9ac29a4b43
|
40 | — | — | — |
|
CCAGCTAGATGCGATAGCAATTACTAATTACACCGGACGT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:be6921efdb00
|
40 | — | — | — |
|
GAGGTGGTAGTTATCCGTTTTAATTAAATCGAGGGACCAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:56f9c9d784ab
|
40 | — | — | — |
|
CTACAGGAGACTTAATTAGGTGCGCACCATGCAAGACCAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:d9420f69e05e
|
40 | — | — | — |
|
CGCGGATCCTGGTAATTACTCAATAGCGCCCATATGTGAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:84170a076a05
|
40 | — | — | — |
|
CCAGCATCCATCACCGAGATAATGGGATTAATACCCTGAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:9da0bf5025f8
|
40 | — | — | — |
|
ATTAACCTACCAGTATGTCGAACGCAACCAGCGCGCTTAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:028c68c32181
|
40 | — | — | — |
|
ACACGCTATGCCCGCACCGTAGCCCTACCGTCATTACCGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:904ead31575e
|
40 | — | — | — |
|
AAGCAATTAATGTACCACTAACACATCGCTCTACCAGCAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:f477d010244e
|
40 | — | — | — |
|
ATTAATTTGTGCGTGACAAGTACGGGTGACCTGCATACTT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:b5650c2a4fd1
|
40 | — | — | — |
|
CGGGTGAACCAACGAGACGGCCTAATGACGGTACCCGGCC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:fbb1957cece6
|
40 | — | — | — |
|
ATTACACCAACAACGTACCCTTATGCCACGAGTATAATAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:bbf51fec3594
|
40 | — | — | — |
|
CATGGAGGACGTGGCGAAATTACATTAATTAACTCACCCT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:a673473fffef
|
40 | — | — | — |
|
TACGCGTAATTAAAACGGATCATGCATCTAGCGGTGCCGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:a09fa6e714ae
|
40 | — | — | — |
|
ATTAGCTAGGCCTGCACCGTCGTAATGGATCAGGGGTGGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:02f07be5a984
|
40 | — | — | — |
|
CTAGCTGGCCTGCGTAATTAACTGCAACCCACGATACCGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:b08ed4361697
|
40 | — | — | — |
|
GCCCTAATTAAGTAAATGTTAATTAGCCTACCCTGCACTA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:ac5e08c2dbb5
|
40 | — | — | — |
|
CGTGGTTGTAGGCATACATGCACAACCGTCACTATTACAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:12d448f24734
|
40 | — | — | — |
|
CTGTGCCTGCATACGGGTTGCACCGAACCCGCATGCCGGC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:93c95908022c
|
40 | — | — | — |
|
CACGCACCCACTCTACCCACATGTAACACGGACAACCCTT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:fbc34d0fc2cb
|
40 | — | — | — |
|
CCACCACGTACCTCCACCCCCATGACTACATGCTGATAAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:fdd3ff7f9ce9
|
40 | — | — | — |
|
CCAGCACCGTGTTTGGTAGATTCCAATTATAGCACCCTAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:e16966d02b1c
|
40 | — | — | — |
|
CCCGTCCATTAGGGCGCCTGCTTCACCACTGACACCATGA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:e66d7bcf8477
|
40 | — | — | — |
|
GCCTCCGGGTACATTTAATTACACGCTAATGCTCCGTCCG
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:c0d87acf1db6
|
40 | — | — | — |
|
TGATGCGGGCGCAACGTACACCGCATCAACACTTAATTAC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:15a0afde0690
|
40 | — | — | — |
|
AGCGGTGCAACCACTACCATCGACCTGCTCCTGCACCCAT
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:9123d7394d6c
|
40 | — | — | — |
|
ATTAAACTCCGTACTGTCATTAGAACTGTACCGTATATCC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:0014cf6b719a
|
40 | — | — | — |
|
GCTAAAGGCAGGTACACGTTATTGCCCGCTATCCCGCACC
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:fab15ca2bc2d
|
40 | — | — | — |
|
CCGCCCGCATTCCCGCAGCACGTTCCACCCACAGCCTACA
PANAPTA:Q9NP62:GCM1_LMX1B:PRJEB66722:R3:90a095259385
|
40 | — | — | — |
SELEX rounds
R3 ·final