GCM1_TCF12
CAP-SELEX sample GCM1_TCF12; CAP-SELEX sample TCF12_GCM1 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCTAAGACGAGCAGGTGCAGAAGCTGCATCTGCACGCGGT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:44b9e0f451dd
|
40 | — | — | — |
|
CCTCATGCACACCTGGCTATAGTACCATATACCAGGTGCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:89ed7f33544b
|
40 | — | — | — |
|
ATGTACGCAGGTGCACTAGTTCGCACCTGCATGTCGCGTT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:6f0077a1b678
|
40 | — | — | — |
|
CACGCCACACCTGCGAACGCACCTGCACCCGATCAACACT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:f796a811936b
|
40 | — | — | — |
|
TAAGGCGAAGCGGGCACACCTGCATCGCGGTGCACCTGCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:9b912852b15b
|
40 | — | — | — |
|
GTGCGCACACCTGCGGCCCACACCTGCTCATAGTCGGTAC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:29219de80f34
|
40 | — | — | — |
|
CTGCACGCCCAATGCAACAGGTGTTAACTTGTGCACCTGT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:5bea219910ec
|
40 | — | — | — |
|
TAACAGGTGCACCTGGCGACGATGCAGGTGTGTCGCGTGA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:c3d39e20eed0
|
40 | — | — | — |
|
GCGCGAACACCTGCACGGTCGACCAGCGCACAGGTGTGCT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:bc69107d4737
|
40 | — | — | — |
|
GCATTGTGCACCTGCCGCCCTCGCAGCTGCATACTGCAAG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:6864bd4be7af
|
40 | — | — | — |
|
CGGTCACACCTGTTGCTAAACAACAGGTGTGTGCCTGATT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:80f6a76d536c
|
40 | — | — | — |
|
AGTGCGCGCAGGTGCATATGCCTGGGTGGATGCACCTGCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:cb024219a0ff
|
40 | — | — | — |
|
CGCACCTGCGCCACCTGCAGGTGCGTTCTCCCATGTACTC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:25860d714fab
|
40 | — | — | — |
|
CCCTTATCGCGACCAGGTGCGTATGCCATGCACCTGGTTT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:f9c03131e1e6
|
40 | — | — | — |
|
GGGACTTACTCCCCCCCCCAGTGAAGGCCCCCGCCAGCCC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:9ccfec633e3e
|
40 | — | — | — |
|
GACAGAGCGCAGGTGCACGTAAAAGCATGCGCTACCTGCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:8c2c2bd4bd17
|
40 | — | — | — |
|
ACAGCTGCGTTGATATTAATGCACCTGTTTCCGAATACCA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:b408b772b390
|
40 | — | — | — |
|
CAGCACCTGCAGCACATACCGCAGCAGGTGCGTCATAGGT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:4fb3fa3caf80
|
40 | — | — | — |
|
CTCAGCTACACTCACACCTGTGTCGAGGACAACACAGGTG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:fd00a4ba7af3
|
40 | — | — | — |
|
TCGCGTGCACCTGCGCGGAAGCACAGCTGCGCCCCCGTCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:8e9bac060869
|
40 | — | — | — |
|
AATTGAACACCTGTTCCCACGACGTTGCAACGCCACCTGG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:a29a9900b352
|
40 | — | — | — |
|
CGAAACGAACAGGTGCGCACCACTCTCTTGATGCACCTGG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:438ca7fbc0b6
|
40 | — | — | — |
|
GATGCAGCTGCATACCGCTAATGCACCTGCAATCCCGCTC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:4bd0efaae7b6
|
40 | — | — | — |
|
CTGTGCACCTGCAGTTGCAGCTGCATCCTGGACCACCTCG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:38516d7044a9
|
40 | — | — | — |
|
GGATTACCGTCAAGAAGATGTTCATTGTTAAAAGTGGCTA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:70c17ad408bf
|
40 | — | — | — |
|
GACACACCTGCCCATAACAGGTGCGAGGTCAAGTCCGCCA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:a7db079226b1
|
40 | — | — | — |
|
AGTGCACCTGCACTGTACGTGTGGTGACAGGTGCGTCACA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:6924ff8daf97
|
40 | — | — | — |
|
AGACACCTGCTGTATTTGCAGGTGGCAACACGACCCCCAC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:98342361c106
|
40 | — | — | — |
|
CATCCTGCACCTGCGTACACCACTGTAGACCGCACCTGTG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:6dfec107fe18
|
40 | — | — | — |
|
TGTAGTACACCTGCTGTGCTAAGCTCGCAGCAGGTGGACA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:3c27f1b704ef
|
40 | — | — | — |
|
CACCTGCACCTGCACGCGCCAGAACACCTGCCGCGCCACG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:401154681a8a
|
40 | — | — | — |
|
CGGGCTAACAGGTGTGGGCCTCTGAGCAACGCACCTGTTC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:5b901d536851
|
40 | — | — | — |
|
GCCAGGTGTGCGACTATGAGCGGTGACACCTGCGTCCACG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:c87cf987407b
|
40 | — | — | — |
|
CAACCATCACACACCTGCACGTGTATTGCAGGTGCGTGCC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:274c993d7f59
|
40 | — | — | — |
|
ACACCTGCATCACATCTGCACATTAATAGCATGCAGGTGT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:e7ddd8dfdeba
|
40 | — | — | — |
|
CCCACACGAGCCAGGTGCACACACCCACGCACACCTGGCA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:23c2a7362350
|
40 | — | — | — |
|
GTAATGCACGTCAGCTGCTGGCGATCAGGTGCCGAGATTA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:ab3808552f7e
|
40 | — | — | — |
|
CACCTGCCCAGGTGAGACCACGCACCTGTCGAAATACAAT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:fee258ab58d7
|
40 | — | — | — |
|
CGTCATTGCTAGCGTGCACCTGGAACTCAATGCAGGTGTG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:d0d411672ac7
|
40 | — | — | — |
|
CGGACGAAAATGCCAGGTGCAAAATGAAGGTGCACCTGTC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:7c5b9e11406c
|
40 | — | — | — |
|
ATGCACCTGGCCTCGACCGCCAGATGCAGTCGCCCAGCAG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:f2ff4e3df4a5
|
40 | — | — | — |
|
TCCACTACATGCACCTGGTCGCACAGTAACGTACACCTGT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:f8b232378fc6
|
40 | — | — | — |
|
ACCGCGGCAGGTGTGCTCACCCGTGCCCACCTGGCTTGCA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:1999541cfd17
|
40 | — | — | — |
|
GCCACCCAACAGGTGCATTTCGCCGTCGTGCACCTGTTAT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:cde480f84fbd
|
40 | — | — | — |
|
ACAACGATGCACCTGTTAGGGCAGGTGCACGTGAGTCCTA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:edbc9bc2f7eb
|
40 | — | — | — |
|
ACACCTGTTACGCTGTGTGCAGGTGCGAACAACTTACATT
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:6f96c86f309d
|
40 | — | — | — |
|
CCAGGTGTGCCTTCGACGCACCTGCGACACATGCCCATAG
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:aafd93064d0a
|
40 | — | — | — |
|
GCGAAATGAACACCTGCACGGCACAGGTGCACGAAATCGC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:f7c56d0b4431
|
40 | — | — | — |
|
AATGCACCTGCCACTCTCCACGCTTAGCAGGTGTTCACTA
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:3c6be0919e75
|
40 | — | — | — |
|
TCATGGCACTACCGAAGTCATAACGCATCGCAATCACGTC
PANAPTA:Q9NP62:GCM1_TCF12:PRJEB66722:R3:c53e14b93b7c
|
40 | — | — | — |
SELEX rounds
R3 ·final