HOXA2_SPIB
CAP-SELEX sample SPIB_HOXA2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCCACTTCCGCATTTTCATGTGTAATTTATGCGCTTAATC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:05e33ecf9ba0
|
40 | — | — | — |
|
GCAAATCAAGCGTTAAGCGCACTTCCGCTTTCTGCCATCT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:7549c9c2a940
|
40 | — | — | — |
|
AGATTAGAACTTCCTCTACTGCTAATGACCTTAATTAGTT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:5e1daede799f
|
40 | — | — | — |
|
ACGCTATAATGACTTACTTCCTCTTATCCTGTTCCTCATT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:014c6abbeff4
|
40 | — | — | — |
|
ACTCAAGTTGCCATTTACTGTGCAACTTCCTCTTTCCCCA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:1bc0a85c5624
|
40 | — | — | — |
|
ACTGTAGCCACAATGTCTCCACGCAACTTCCCCTTTTTAC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:747cf615d9fe
|
40 | — | — | — |
|
CTAATGATCCCAGCTTCACTTCCGCATTTTCTCGTGTCCC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:2f94e007cee1
|
40 | — | — | — |
|
TGCAAGGTAACTTCCGCTTTTCGTGCTTACCATTTAACGC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:64fe2d693084
|
40 | — | — | — |
|
AGGCAATACGCGCTGATAACTTCCGCATTTCACCATTATG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:89cfdb89aa27
|
40 | — | — | — |
|
TCCGCCTCATTTGGCACTTCCGCATTTCATTCATTACCCC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:cdf11272058d
|
40 | — | — | — |
|
CCAGGTCAAGTGATAACTCACTTCCGCATTCTGCAACCGG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:49182c8446cc
|
40 | — | — | — |
|
TTACTATACGGATACGGAATAACAAAATTGTTCCCATATT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:9f3df8ed6259
|
40 | — | — | — |
|
CAAAACACAAGCACTTCCTCTTTTCCGGACACATCAACTT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:5f5378e8f1cd
|
40 | — | — | — |
|
CGAACACGAACCTACAGGTTCCCATTCCACATCCTCCCGA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:b6e98f89519d
|
40 | — | — | — |
|
CCACCAATACTATTCGGATCACTTCCGCTTTTCTCCACTT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:d3465e27524b
|
40 | — | — | — |
|
TTCACGCCGTCAACAATAATTACTTCCGCTTTTACTCCGA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:91e44e4ac73b
|
40 | — | — | — |
|
ATGACGGTTCATCCATAGTACTTCCGCTTTTACTAACTGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:d35c78b48e69
|
40 | — | — | — |
|
AGGACAGTCGACCTTCGGCAACTTCCGCTTTTGCGCGTGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:ca8963014d8d
|
40 | — | — | — |
|
AATACTTCCGCTTTTATGAGCCACGAAACCTAGAACTAGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:5a6bc8cda751
|
40 | — | — | — |
|
CCGCTCCATTCTCTAACATGCAGCGTTACTTCCGCTTTTG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:4ffb9e294280
|
40 | — | — | — |
|
GCAAAGCACACTTCCGCATTTCCCCGCGATCCGCGCGCGC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:40da54647428
|
40 | — | — | — |
|
CTAGCCGCGTTGACTCCACCGTTACTTCCGCATTTCTATC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:3e3d9e4ff793
|
40 | — | — | — |
|
CTTCACCAACTTCCTCTTTTCTGACACCCCCCACCGTGGC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:e45f31d96a01
|
40 | — | — | — |
|
CGATGCCCCATCCGATGCATACTACTTCCCCTTTTTCCCG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:c9ea4cf4154f
|
40 | — | — | — |
|
CGAAGGCGAGAAGTGATGACCACTTCCCACCGCATCCGCG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:12e7e5fe5011
|
40 | — | — | — |
|
GGACAAGTGCACTGTCAACTCAGTTTGCACTTCCCCATTT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:4d89c06f415c
|
40 | — | — | — |
|
CTAATCGCCCCGTATTCACGCCACTTCCCCTTTTTACGAC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:951c44d4a624
|
40 | — | — | — |
|
TCTCACTTCCCATTTGTCTTTTCCAAACGAGAAGTTGCTG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:05abf941d0b3
|
40 | — | — | — |
|
CCCCTTTACTTCCTCTTTCTTAAACTACTTATGACTAACG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:53ad1482f3fc
|
40 | — | — | — |
|
TCTGAGATACGGTAAACTACTGGTTTCCCATATCGACGAA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:1a8434237013
|
40 | — | — | — |
|
TCCCCACTGCACCACGTCCCCCGCCACTTCCGCTTTCGGC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:85581fa34b44
|
40 | — | — | — |
|
AGCTGGCGTATCCGCGTTCAAGTAGGTACTTCCGCCAGCT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:afdac6b1083f
|
40 | — | — | — |
|
CCACACCAATCGTTAATCCTACTTCCCCTTTCTCCACGAG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:02ed4ce3fb70
|
40 | — | — | — |
|
CAAGCGAAGCCCAATTTACGACTTCCCCTTTTTACGCAAC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:78e29c378c17
|
40 | — | — | — |
|
CACCCTCTCATCATTAACCTGCACAAAAAGCGGAAGTAGA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:250b832d2ee4
|
40 | — | — | — |
|
CCGATTGGAACTTCCGCTTTATCGCACCACCACACGGCGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:88357aaef301
|
40 | — | — | — |
|
AAAAGCGGAAGTAACCTAACCCTGGCAGCCGACAGCACTA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:1e0dab2f6a61
|
40 | — | — | — |
|
CGCGATGCCTAAGTTGGGGAACTTCCGCACTCCTTTTGCT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:a3ab276329c2
|
40 | — | — | — |
|
CACTTCCTCTTTTCCACGCCAACCCGTCGCGACTGACCCC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:deecc8026390
|
40 | — | — | — |
|
TAAGGTCTGACTGTCTACTTCCTCTTTTTAGTACATCCTA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:4ec354bad7e1
|
40 | — | — | — |
|
CGTTCTTAGTTCACTTCCTCTTTTTGCCTTGCCCTATTAT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:bfba2026a75b
|
40 | — | — | — |
|
CTTTACCCACACGCTACCTACTTCCTCTTTTACTCCCACA
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:16cc52d580cf
|
40 | — | — | — |
|
TGCGACCTCCGCCATTCTAAAACACTTCCTCTTTCTTCTC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:7769120293ad
|
40 | — | — | — |
|
TTTGCATCACTTACTTCCTCTTTTCGCAATAATTCCGACC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:e809bc9aa54b
|
40 | — | — | — |
|
TACCATTCCAACGTAATTACAAACTTCCGCTTTTCGACTC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:14e9a6677c4f
|
40 | — | — | — |
|
TCTCACACCGGCCAGGGCTCTAGCTACTTCCGCTTTTTGC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:5249f9cf1aa2
|
40 | — | — | — |
|
CGTGTACCGAACTTCCGCATTTCTAATTGTGGATTGATCG
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:6fb1d834eca2
|
40 | — | — | — |
|
CCACTTCCGCTTTATTGTTAATTAGCGAGGTAACATCGCC
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:e4f33c842405
|
40 | — | — | — |
|
AATACTACTCTAAGTGTTAATCTACTTCCTGTTTTCATGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:40679c581a17
|
40 | — | — | — |
|
CACGAAGATCCGGTCGAAGCTCACCAGAAAATGCGGAAGT
PANAPTA:O43364:HOXA2_SPIB:PRJEB66722:R3:281f846da4ef
|
40 | — | — | — |
SELEX rounds
R3 ·final