HOXA9_TEAD4
CAP-SELEX sample HOXA9_TEAD4 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCACGAATGTGAGCTATGCGCGGAATGTGAGGTATGCATC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:3f95f4cac281
|
40 | — | — | — |
|
CAATACCACCGCCCATTCACATTCCACGCATTCCTGGAGT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:044e0cb66635
|
40 | — | — | — |
|
CAGCGAAGGCATGCAAAGTATGTGAGGAATGTGAATGTAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:632f0ee61a94
|
40 | — | — | — |
|
AGGCATTCCTCGCATTCCTGACACATGCCGTGCATTCCGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:4fd8361e5978
|
40 | — | — | — |
|
ATTCCAGCGACATTCCATAAATCGCCCGCATACCATTGAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:1d5573920053
|
40 | — | — | — |
|
ATCGTTGGAATGATCGGAATTCGAAATAGTGAATTCCACA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:3c4fa3345fdc
|
40 | — | — | — |
|
CTAATAGCCAGTAATACGTTCAAGAATGCATGCCACGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:227bda69638a
|
40 | — | — | — |
|
AATCGAACAAATTCCGCAATGCTTGGAATGTATGGAATGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:b226c6e55210
|
40 | — | — | — |
|
AGAATGGCAAGAATTTGCGGAATGTCAATTGCCGCGTCTC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:d9cbe05c3b52
|
40 | — | — | — |
|
TATTAGTACGCCTGGAATGTGATGAATGCCAATTATGCGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:211c524dd8de
|
40 | — | — | — |
|
CCTCCCGCATTCCTAAAATTCCCCACATTCCATTGGTCCA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:38ac541097f6
|
40 | — | — | — |
|
TAGCCGCGGAATGTAAGGAATGCAACCATGCATATCTCAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:df31dfd9b86f
|
40 | — | — | — |
|
GCATTCCTGAAATACCAAGCATACCAACGATACGCCGGAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:b7dc6c22dd77
|
40 | — | — | — |
|
ATTCCGATCATTCCTAACATGCTTCCTACCGAGCCAATTA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:de64fd8bff78
|
40 | — | — | — |
|
ATAATTGCACATTGCCATAAATAATTCGCATTGCAAACGT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:09c1442e0bf3
|
40 | — | — | — |
|
TTAATGTATACGACAACATTTCAAGAATGCGAATTGGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:2e9ebf06f01d
|
40 | — | — | — |
|
GAGCCTATGGGCGATTACGAGAATTCCAAGAATGTCAATT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:5dcabebb18f6
|
40 | — | — | — |
|
GCAAAATATGCCATCAAGGAATGATAAGTATGCAAAGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:fb0ca288f93f
|
40 | — | — | — |
|
TAATTCACATTCCACGCATACCACTGCGAGTCGTACGGCA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:17055f19fd70
|
40 | — | — | — |
|
ATAATTGCCATTCCTACATACCATTGCGCAATAAGAGGGA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:a0957fbd9e94
|
40 | — | — | — |
|
CTAATGTGCTATAGCGAATAGCAAACACATTCCTATCATT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:e37b0e5b0cf8
|
40 | — | — | — |
|
AAGAACGAAACGCACGTGGTATGCCAAGCATGTAAGGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:62c3cbb325f5
|
40 | — | — | — |
|
CCGCGCTATTCATTCCACGCATACCTCACATACCGGGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:c4cf9f569963
|
40 | — | — | — |
|
ATAACGATGTAATGTGCATATTCCAGATACCGTAGTGTGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:31e9e577a13f
|
40 | — | — | — |
|
GTGCCGAAAATTCTTTGAATAGATGGCGCATACCACGCGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:d2470409ad3a
|
40 | — | — | — |
|
CAAATGACATTATGGTAACTAATGTATGGAATGTGAATGG
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:e9720bb5f104
|
40 | — | — | — |
|
TGATGGTATGGCAGATATGCTAACTATGTCGTAATTAAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:b3084838b463
|
40 | — | — | — |
|
GTTAATCCCTGGCTTTACTTCGCGGAATGCAGCCGCAGCG
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:51084f86b7af
|
40 | — | — | — |
|
GCAATAAATGGCTATTATGCAATTCATGGAATGCGAATTT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:4c671a1019a4
|
40 | — | — | — |
|
ATGGGAATGCAGGCATTGCATTCCATAAATACCGACACAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:1ec9fcf9c554
|
40 | — | — | — |
|
TGGAATGACTAACGTGTGGAATCTACGGAATTCGAACTAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:e5be78d9435b
|
40 | — | — | — |
|
ATAATGTGCATTATTGGAATGCATTAAATTACTGCTGCAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:f84c9f58409e
|
40 | — | — | — |
|
TTAATGTGCATAATTAGCATACCAAATTAGCAATTATGCC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:73bc19059036
|
40 | — | — | — |
|
TTGTCACCACGAAATAATCTGTCATTGGAATGCTAAGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:ce7550feea8b
|
40 | — | — | — |
|
TTTATGGGAATGATAATTGGTATAGTTTGCATACCTCATT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:d31f76f85a13
|
40 | — | — | — |
|
TAGCAGCGTCAAGAATGCGAGGAATGCTAATTATTCTACG
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:fbaaed226233
|
40 | — | — | — |
|
GATGCAAGAATGTACGACTACATTCTTAGCATGCCTATGC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:dbfb39bf2cd2
|
40 | — | — | — |
|
TGGAATGCAACCTGGAATGCCAAATATGCGCAATCACATT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:6ae4083dcb2a
|
40 | — | — | — |
|
CACATTCTTGGCATACTCGAAATTCCTCACCCCACCCTAC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:728fe351c9d4
|
40 | — | — | — |
|
TTACGAATGTGCAGTATTGCATTCCAATTGCATTCCAATA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:8324d4078423
|
40 | — | — | — |
|
TATGCTCACTTGCATTCCTTGAATTCCAATGATACCACTC
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:dcc740fb5f77
|
40 | — | — | — |
|
CCCAAGCCAAAATAATTCACATTCCATGCATTACTCGCAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:3a46e094b19f
|
40 | — | — | — |
|
AGCCCACCAAACATTCCACACATACCCGACATTCCCGCGT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:9d5f444a27f8
|
40 | — | — | — |
|
ATATATGCTACATGTAATTCACATTCCACGCATAGCCATT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:cecf34ac5532
|
40 | — | — | — |
|
CTAATTGCATAATCGCTGCATTGGACACATTCCAATTGCA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:3aa2efc7bdb3
|
40 | — | — | — |
|
ATTCCTAACGCTATTAACATTCCGAGCGTGCCATGCGCGT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:49c692eecdb8
|
40 | — | — | — |
|
CATTGACATACCGAGAATACCTAGCATGCCTTTGCACATA
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:a2840500e600
|
40 | — | — | — |
|
CGCTACGCAATACCAATACGCATTTTTGGTACTACGGTAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:2e6e69d36231
|
40 | — | — | — |
|
ATGGCGGAATGCCAAGTGCCTATAGCGCTATGATTGGAAT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:4990c1f513fd
|
40 | — | — | — |
|
CTAATGGCCGCGAAATTACCCGTACACATTCCATGTGCGT
PANAPTA:P31269:HOXA9_TEAD4:PRJEB66722:R3:b9d40a544ea5
|
40 | — | — | — |
SELEX rounds
R3 ·final