HOXB13_SOX11
CAP-SELEX sample HOXB13_SOX11; Mixture-SELEX sample HOXB13_SOX11 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCCTCGTTATTATATGAACACCGAACGTTCTCTAATGGCA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:c64db2723fb4
|
40 | — | — | — |
|
GCAATTTAACTCTACCCATTATCGTTCAAAGTTCGCTATG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:969532b6f282
|
40 | — | — | — |
|
CTACGCATCAGTAACAAAGCCACTTTGTTGTGCGCATTCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:30539214165d
|
40 | — | — | — |
|
GCATCATCCCCACGCCATACATCCAAGCATTTCCATACTA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:b0c5fc32554b
|
40 | — | — | — |
|
GCATCACCACAATGGCTCATTGTAACGGTGACCCCCGCCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:efc4efeb6618
|
40 | — | — | — |
|
CTGCATTGTTCGTGATTTTGACCAGGAACAATGGCCGCCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:ebbc3e0a997c
|
40 | — | — | — |
|
AGCCCATGCACAATCACATTGTGTACATCGGCCCAATGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:86081a1d2d16
|
40 | — | — | — |
|
GTGTAACAATGTGTTATTGTTACCTTACTGGTGCAAGTCG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:b7b4936fdb17
|
40 | — | — | — |
|
GGGACAACAATACCTCATTGTTTCCGCAACGCAGCAGGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:ae05ed45e1ce
|
40 | — | — | — |
|
GTGCCGTCGAGCGAACAATGCCTCGTAAACTGTGTTGTGT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:fb4626c82f8d
|
40 | — | — | — |
|
CAAACCACTGGACAATGCGTCATTGTCCTTGCTAATGCTG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:f0fdf3b1a248
|
40 | — | — | — |
|
CCATAATCTGCATTATGGCTACCGTATCTTGAACACTGCG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:09bceb919be6
|
40 | — | — | — |
|
AACGTCTGACTAACAATGTCCTTTTTACGACCCTTTGTGG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:cff883acbf94
|
40 | — | — | — |
|
TATTGTCAACGGTATACGAGATGACAATGGGGACTGATCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:f1ddd39dca8e
|
40 | — | — | — |
|
GCCAAATGCATCGAAACAATGCACCATTGTTAGAGCAGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:b6410374ebea
|
40 | — | — | — |
|
TGACCCCTGCGCAGCAAACAATGGCATTGTTAGGTCAGGT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:8de131267eec
|
40 | — | — | — |
|
GTGCGTCACAAAGCTCTTTGTTGACCGGGACATCATCGTA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:bd3b6b625254
|
40 | — | — | — |
|
TCTAGCATTGTGTACCTTTTATTGCCCTTTATGCACGACA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:43a3ec088b45
|
40 | — | — | — |
|
CCATTATCTCGACACAATATCATTGTGCTCCCTGTCACGA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:02fdf97672bb
|
40 | — | — | — |
|
GTTGGCTAGGGGCACAATTGGACCATTGTGCCGGAGACAT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:638da0b3682f
|
40 | — | — | — |
|
GCAACAAAGGACTCATAAACCTTTGTTGCCTGCATCGTGG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:2adb92d072b9
|
40 | — | — | — |
|
GTTATGACAATCACCTATTGTCTTCGCTCCATGCTGTACT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:bde3eaf68aaf
|
40 | — | — | — |
|
TAGACCGTGGAGACAAAGTGCATTGTCTTGCTTTATTGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:dd53dcd570e1
|
40 | — | — | — |
|
CTGACAGAACAATTGCTATTGTTCGTCGGTAAGCGATTCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:7306ee2f44c0
|
40 | — | — | — |
|
GTTAAGACAGAAATACGATTGTTCCGTGAACAATGCTACT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:1c7bce51a24d
|
40 | — | — | — |
|
TTCATGATGCCCGTGAACAATGAGACATTGTTCGACTTCG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:8d07a17fcc10
|
40 | — | — | — |
|
TGAGTGTTACCGATTCTTATTGTTGCAGCACAATGAGTGA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:c16c875a8c70
|
40 | — | — | — |
|
TCTACGTAATCGTTGCGGACAATAACATTGTCACCATAAC
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:5db8f1a36dcb
|
40 | — | — | — |
|
GTTAGGCACAATAAACTATTGTTCCAAGTCTGCGTTGGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:c94a52fa369e
|
40 | — | — | — |
|
CACGAACAATAACTCGTAAACCAAGGTGGACAATGCCCTT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:8e8b15c27ef6
|
40 | — | — | — |
|
CTTGAACAATGCGGCATTGTTCATCACTGATCAAACTACT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:361cd84fc47e
|
40 | — | — | — |
|
TGTACTAACAATGTCATTGTTATGGTTTAATGTTACACCC
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:7ddecfa0f0d1
|
40 | — | — | — |
|
GTTCAAACGCGAGACAATGCATCATTGTGTTAATGTGCCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:d50b16f274c2
|
40 | — | — | — |
|
GCACAATAAGAACAATGGCCACGTACGACCTCGTAAATTA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:2e8bc62d5bed
|
40 | — | — | — |
|
TGATCGATTCCTTATTGTCTGTGGTGACAATAAACGGTGT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:624430405436
|
40 | — | — | — |
|
ACACTACGCTGTCCTCTTTGTTGCCCATTGTTGACTGCCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:8682a7c99350
|
40 | — | — | — |
|
GTCACCTCGTTAAACACATAACAATGAACAAAAGGACAAA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:dd202dafd8b8
|
40 | — | — | — |
|
ACACAAAGAATAGCATTCTTTAGCGTTATATTACGGTGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:00576ec666f1
|
40 | — | — | — |
|
CTTTTGGTAACATAAGGAACAATATCATTGTTCAGGCACT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:8b4be1e23426
|
40 | — | — | — |
|
TCGCCGACCACGTGAGGCAATTGTTGTACCAACAATACCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:ae5e4b9ba91d
|
40 | — | — | — |
|
CACGTTCTAGCGCAACACTCCTCCGTTGTTGCACGACGCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:2d3353a0809f
|
40 | — | — | — |
|
TCACAATACGTGCGTCTTACGAATTTTACGATCCATTGTA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:ca26ff6fa5d2
|
40 | — | — | — |
|
TTGCCCCGATTGTTTCGATCTCAACAAAGCAACAATGCCT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:6166230eee79
|
40 | — | — | — |
|
CTTCAACTGAACTAGACAATTGCTCATTGTCTACGTTTGT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:7cb540dcb1f5
|
40 | — | — | — |
|
ATCACATTAAACGCAACGTAAAGCAATGGCATTGTTTTCG
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:14ee553c1232
|
40 | — | — | — |
|
GACAGCCGCATTGTTCCCATTGTCCAGGCAAACAATAACT
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:69f9d85d077c
|
40 | — | — | — |
|
AACATCAGGCGAACAAATAGCATTGTTCGCGCCCCAATAA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:758b33a88eb0
|
40 | — | — | — |
|
GAGGACAACAATACCAATTGTTGTGCAATAATCGCCACCA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:2639d4ff0a82
|
40 | — | — | — |
|
CAATGTGCAACTGCATGAACAATGCTATTGTCATAAAACA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:89c01141220a
|
40 | — | — | — |
|
GACCATTGTCCCGTTGTTATGAAGACCCTTCGGCAAATGA
PANAPTA:Q92826:HOXB13_SOX11:PRJEB66722:R3:603f1a467338
|
40 | — | — | — |
SELEX rounds
R3 ·final