HOXB13_TGIF2LX
CAP-SELEX sample HOXB13_TGIF2LX; Mixture-SELEX sample HOXB13_TGIF2LX · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AACACCCATCTGTCACCAGGTTGACAGATTAACGAGCCAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:924bf5d57892
|
40 | — | — | — |
|
ATCGCGTGACACCTATAAACCTGTCACTACGTGACACCGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:6b7581f8b900
|
40 | — | — | — |
|
GACAGATTTACGTGACATGCACGTCACAGCCAAGCATGGG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:6d6e3db70dc6
|
40 | — | — | — |
|
CCCCCCGCTGTCACATAAAGCTGTCATCGCCACCTCGCGA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:5f1cadbbce21
|
40 | — | — | — |
|
AGGGCTCATAAACCTGTCGTACACGTGACAGCTGGCCGCT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:409144305da0
|
40 | — | — | — |
|
TTGCACCTGTCACGCCGACCCCATAAACCTGTCACTGAAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:adc8a17869cc
|
40 | — | — | — |
|
ATGCATGACAGTTTTACGAGCCGTCACGACGTGTCCGATC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:330acc77320a
|
40 | — | — | — |
|
GTGAGTGTCCCTGTCATCAAAACTGCCCCTTGACAGGGAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:ea7f14a18880
|
40 | — | — | — |
|
GCCAAAAGCTGTCAACATGCCCACGCTGACAGGTTTACGA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:f0cfc8676038
|
40 | — | — | — |
|
GACAGTTTTATATGACGTCCCTTAAGTCCGTGCGTCGCAT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:eb3c101e5dac
|
40 | — | — | — |
|
GACAGCTCGCGTCACACTAGATTGACACATTTATAGCAGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:b1061a4a2b13
|
40 | — | — | — |
|
GAACATACGCCAATAAACCTGTCACCGCGACTGTCACTCC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:abf9112805fa
|
40 | — | — | — |
|
GACAGCTGTCTACCCGAGCCAATAAAGCTGTCATCTAGGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:ff7ecd21cd05
|
40 | — | — | — |
|
GACAGCCCCACCATTAAACTGTCACACCACCACGTGTCAT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:a14c4fb38e6e
|
40 | — | — | — |
|
CAGCGGCAATAAATCTGTCAACACGACGCGGCTGTCATCG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:31a8488f3e0e
|
40 | — | — | — |
|
TTGCCATCTGTCACCCTACTCATCGTAAATATGTCATGGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:532afb27dea4
|
40 | — | — | — |
|
ATTAAGCTGTCATCATGTGACAGCTAGTTGCACGACATGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:5039041465fb
|
40 | — | — | — |
|
TGACAGGTTTACGACCTTAGGACCTGACACTCGCGTCGAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:ba2531179aaf
|
40 | — | — | — |
|
GCCCTTGACAGCTTTATAGCCTCGCTGTCACAGCCACATC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:fd978a1406c4
|
40 | — | — | — |
|
GACAGATGTCACATACACAATGAGAACCTGACACCTGTCA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:bd95517860d2
|
40 | — | — | — |
|
CATAAACCTGTCACACGCTGTCAGCAACCTCTTGGCCAAT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:bd9fb8e0b27b
|
40 | — | — | — |
|
TCTCGTAAAACTGTCAGTCCATCTGTCAAAGTTGCTGCTA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:4ee5e32f1815
|
40 | — | — | — |
|
CCACCACTGACATATTTACGTGACAGCTCCCTGCTACCAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:394fda54c8ca
|
40 | — | — | — |
|
CGTAAAGCTGTCATCCACGGATGCCCTGTCACTCGCTACG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:0accdea5ec0e
|
40 | — | — | — |
|
ACCACACCCATAAAAATGTCATCCCCCTGTCACCATGACC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:960c98f9d479
|
40 | — | — | — |
|
TCCATGTGACAGCTTTATGACATGACATCTGTCACTCCGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:3b424a9d543a
|
40 | — | — | — |
|
GCATGTCACATAAACCTGTCATTCCGCCATGGCCTCGTGA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:3ceb5268cb64
|
40 | — | — | — |
|
GTGTACTCGTAAATACGTCAATGCCCTGTCATATTCTCGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:4263788533de
|
40 | — | — | — |
|
GGCCTTGTGACAGTTTGACATTTTAACGACCTTGACACGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:865065e506d6
|
40 | — | — | — |
|
ATCGTGACAGTCCCATAAATCTGTCACCATTTTGACAAGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:111a65a8df09
|
40 | — | — | — |
|
TCTCGTTAAACTGTCACGCGACGACAGCTTTCCTCCGCCT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:74017ad7c3ed
|
40 | — | — | — |
|
GCGTTGACAGTTTAATGGGGCTCCCTGACAGCCTCAAGAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:591cc9750e0c
|
40 | — | — | — |
|
GACAGGTTTATGGAGTTGCTCTGACGTATGGCGTATCGGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:102f45ef57ab
|
40 | — | — | — |
|
ATGACAGCACCATTGACAGCTTTACGTGACAACTACCCCC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:a44d096fefe2
|
40 | — | — | — |
|
CCTGTCAGCTAGCCCATAAACCTGTCACCTTACGTCCAGT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:4100ae832bd7
|
40 | — | — | — |
|
GACAGCAGCTGTCACATCAAACCGTCACCTTACGGTCCCT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:28e951c8d8cb
|
40 | — | — | — |
|
GACACCGCCTAATAAACCTGTCACACACGTTACGTGAGTC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:825189cbd2e7
|
40 | — | — | — |
|
GACAGGTTTACGAGATACGCGATGACGTGTAGTCTCACCA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:1dc363cb15a9
|
40 | — | — | — |
|
GTTCCAGCAATACTCATAAATCTGTCATCCACGTCACATG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:bbfd0281b93d
|
40 | — | — | — |
|
ACATCCATGACACTCGCCCAATAAAGCTGTCACCCACACT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:654b102a223a
|
40 | — | — | — |
|
CCCGCCCACTGGCCTGTCACATAAACCTGTCATCCCGTCG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:2725674e1528
|
40 | — | — | — |
|
AACTCACGCTAATAAACCTGTCACGACCTGTCAGACCACT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:7d24ec80cc57
|
40 | — | — | — |
|
GACAGCCCGCCCTGACAGTTTCACTACGTCACGTCTCGAC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:598c07787acd
|
40 | — | — | — |
|
CTGAGTCACCGAGCTGTCACGCCACTGACAGTTTAACACA
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:ae6fe8341448
|
40 | — | — | — |
|
ACTCATCCCGCGCTGTCAAATGGCTGTTAAACTGTCACTC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:7e370a2e61a8
|
40 | — | — | — |
|
CTCGTTAAACTGTCAGTCTGTCACCGTCCCTCACACTCCC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:fcf1a01d0de4
|
40 | — | — | — |
|
GACAGCTGTCAGATGACACATTTATTATGACAAACCGTGG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:74ef2b8b4679
|
40 | — | — | — |
|
ACACTCGTTAAAGTGTCACAATGAAGGCGAGGCTGTCAGC
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:8c1016c7753a
|
40 | — | — | — |
|
GACACATTTACGATGGACCTGTCATGTGTGAGGCGGACCG
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:fae8be684256
|
40 | — | — | — |
|
GACATTGACGTTTTTACTACCGTTTCTGACAGCGCACATT
PANAPTA:Q92826:HOXB13_TGIF2LX:PRJEB66722:R3:dba2903109db
|
40 | — | — | — |
SELEX rounds
R3 ·final