HOXB2_PAX2
CAP-SELEX sample PAX2_HOXB2; Mixture-SELEX sample PAX2_HOXB2 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACGATACGCAACAGCGCTACGTCACGCCTCATTAGGGACA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:d57a3b76523c
|
40 | — | — | — |
|
CGTTATGCTAACTACTAATTAGTCACGCATGATTAAGCCC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:2d097ea6c9d7
|
40 | — | — | — |
|
TTACACGCAGCGTAGCGTGACCATACCCAACGAGCCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:691f7d80eae2
|
40 | — | — | — |
|
TCGATCAGCCCGTGACCGTCACGCATCGTTGACGTACCGC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:a46a5c1cd105
|
40 | — | — | — |
|
CTAGTCGCAAACCACTACTCATTAGTTACGGATGAACGCC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b63f6e92c075
|
40 | — | — | — |
|
GAGCGGAACTAATGACCTACACCAATCGCTGTGTGCAGCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:a0751955230c
|
40 | — | — | — |
|
CCTAATGAAGCGTGACGAAGCTCTAACGCATACATCGCCC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:595cfcc8321b
|
40 | — | — | — |
|
TAACCGCTGCTTAATTAGGCGTGACGGACAACAATCATCC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:e205861bba45
|
40 | — | — | — |
|
CATCCATCCGGAACGAACTCGCCGATTCGCATCATTAGCG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:d6b3287a5fc4
|
40 | — | — | — |
|
AACGGTCACAGTTCGACGCGCATGACTGCCATTAAGTGGC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b7be595c6a3f
|
40 | — | — | — |
|
AGTGCACGCTACGGAACACTGAGCAACGCACTAAGCGATG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:d946ea9e3366
|
40 | — | — | — |
|
TTCCAGTCTATTAGGTGCTTAATGAGGCGTGTGAAGACAG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b19136af18d3
|
40 | — | — | — |
|
TAAGGCAATCATGCAATTGGTTGTGTTCATTCATGCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:e1eb0fb3b71a
|
40 | — | — | — |
|
AACGAGATGAACTGAAGCGTAACTAATGAGCCTACACTCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:7a305597a7eb
|
40 | — | — | — |
|
CATCCTAACATTTGTTTCACGCATGGCCGATGAAGCGGAA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:057cc7a9cdc9
|
40 | — | — | — |
|
ATGGCCGATGAGCTGACACGCAACCAAGCGTTACTAATGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:53d8de619dc3
|
40 | — | — | — |
|
CGTCACCACCCGCATGCACCATTAGTGCCGCTCCAGTGAT
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:a06305380ac9
|
40 | — | — | — |
|
CGTGATGCGCAGTCAACCGTAACGCATCACTTACGCTCTA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:600e88929f68
|
40 | — | — | — |
|
GCTGTTGATGCGTGACTAATTACCTGCACTCTGATCGCTG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:a29016a64c2c
|
40 | — | — | — |
|
TTAAGCTAGCACGGAGTGACGGTCTATTGACCAAGCGGAA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:2946dfa76782
|
40 | — | — | — |
|
ACATCGCTCCCTCCACGCATCACAGGCCAAGCGTGACTGC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:d37b3541ba8d
|
40 | — | — | — |
|
TGACTTCGCTTCACTAAGCTGCGCACTCAGCAAAGCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:9dc4c5f354a5
|
40 | — | — | — |
|
TGATCGTTAGAGTGTAGCGCTGACGCCCGTTCAACCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:7fc63c5f5fac
|
40 | — | — | — |
|
GTGCATAACGAAATGCATGATCAACCACGCGTGACCGAAC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:777299ea6ff5
|
40 | — | — | — |
|
TCACGCTTCACTCATTATCTTAGTGCCTAGTGAACCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b774ea371485
|
40 | — | — | — |
|
ATCACGCATTAGTGACGCATCACTGAGCTGTAATGACAGC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:cd6cb919552b
|
40 | — | — | — |
|
CGCTCCATTGAGCCGTAGCCTGCCTACCGTCACGCCGCAC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:1bf7cac5e63d
|
40 | — | — | — |
|
AAACGGCTCGTCACGCCTAATTAACTTCGTTTGCACATTA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:ec23a8b71dab
|
40 | — | — | — |
|
GGCACCATGACATGCTTCATTAGAGCGTAACGACTTATGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:cc4667ca0f61
|
40 | — | — | — |
|
TTAACGACGCGTAACGCCGTCACGCACTAATGCCCTGCTG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:6a5beabbaa9e
|
40 | — | — | — |
|
CTGCGCGTGCAGTCATCCGTGAACATACGCATCATTAACA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:96582ae1f782
|
40 | — | — | — |
|
AATCGGCGGTGACGCACCATTAACCATGCGTAACCCCGTG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:1211eaa92226
|
40 | — | — | — |
|
TTACCCATCGTTAATCGTGCGTGGCGAACGTCGCGCATGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:534c7df00077
|
40 | — | — | — |
|
CTAAGGTCACTCGACCGTGACTAACGAGCAGATGAGCATA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:6c27bde78f0f
|
40 | — | — | — |
|
ACATTACCATGAACTCGTTACGCATCGTTCCAGCTGAATG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:31da97e25b70
|
40 | — | — | — |
|
CTCTAATGTGATACGGATCACTGATTAACGATACGCTCTG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:3d9b734a6644
|
40 | — | — | — |
|
TAACTACTGCATGCATCATCAACCCGTCACGCCTAGCTGC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b5fcaabeade5
|
40 | — | — | — |
|
AACGCGAACGCGTCCACCAATCCAGCTTAATGAGCCGTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:d4fdd1309186
|
40 | — | — | — |
|
ATGCACTAATGACGAAGATACGTACACGCGTCACGCTTCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b4bf9f570d5b
|
40 | — | — | — |
|
TACCACAGCTAATGACTCCGCCACGCAACGTTACACTTGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b65d4c409faa
|
40 | — | — | — |
|
TCCGATAGGGATAGTTAATCAACCGTAGCGTTAGGCATGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:dfb4986b84e6
|
40 | — | — | — |
|
TTTAGATACTAATGGTCATTAGTGACGGTTGACCAGCTTG
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b98ad76e6b77
|
40 | — | — | — |
|
CGCAGCCATGCGCACCCTTCCGGATCGTCGATTGCGCAGA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:8ee6ec4ea488
|
40 | — | — | — |
|
GATCGTGGATATGCAGTCATTAGTTCCACTTGAACGAACA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:2ec94d02de4f
|
40 | — | — | — |
|
ACTGCCTAACGATGCGCAACGCACTGCACGCTTGAATGCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:fc1aac1b1567
|
40 | — | — | — |
|
TCGTAAGGCGAGGCAACGCATGATTACGTACCCAGTGAAC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:e182b4c1e157
|
40 | — | — | — |
|
AAGCGGAACTAATTACATACATCCGAGGACCAGTTAGCCC
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:20f5c42cc4fe
|
40 | — | — | — |
|
CATCCGCGACCCAAATCGTGGCGTGCGCAATCATGCGGCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:8e1b481d6a30
|
40 | — | — | — |
|
AAGTGCCTCGTCACGGTTCGCTGCCCTTGAGTGCGCGTCA
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:b2deabb69b87
|
40 | — | — | — |
|
TAATGTGGTTAATTGACCGTGACGGGCATGTCACGCTGGT
PANAPTA:P14652:HOXB2_PAX2:PRJEB66722:R3:0dfb37684941
|
40 | — | — | — |
SELEX rounds
R3 ·final