HOXB2_SRF
CAP-SELEX sample SRF_HOXB2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCATACAAGGCTACAATCAACGCGACGATGCTAATGAGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:100a8c3c200d
|
40 | — | — | — |
|
TGCGCACGAAGTGACGTGCTAATTGCACCCCCATATTAGG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:208088894374
|
40 | — | — | — |
|
GCACATCTCCTCCCTAATTAGGGCATCAACGACATGTCTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:6d87491e228b
|
40 | — | — | — |
|
GCGCCAAATTAGGTCATTGGCTTATATCACATTACCGTGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:befe5ee08f30
|
40 | — | — | — |
|
CTTGAATGCCCTAATACGGCACACCCACCCTAATTACCAC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:ac919031aaa8
|
40 | — | — | — |
|
CCACACACCTAATTAGGTCACGGCACCAATGTCGTTAGCC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:aed415a55fa9
|
40 | — | — | — |
|
GTAATTATGCGACCTAATTAGGCCCTTACCAAATACGGTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:c5f47fab6970
|
40 | — | — | — |
|
AGGCCGTATAAGGGCATTAGTTGGCCATTACCGCAATTAG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:50e70ff3af1a
|
40 | — | — | — |
|
GTTGGACAACGACCTTACCCTTGTACGGTAAACGGTAATT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:4c62f56bcbc3
|
40 | — | — | — |
|
ATAGCATTGCCGCTAATTACAACATTACCATTTACGACCA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:cae81a7477c8
|
40 | — | — | — |
|
ATGGCGATCCAATGATAATTACCCTACATACCTTATTTGG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:177ad410734e
|
40 | — | — | — |
|
CAAATAAGGTAGATCCGCGTACTTACCATAGCTAATGACC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:e6d8b1a9a9df
|
40 | — | — | — |
|
AATGACCAAATATGGCTTACTGTACATTAACAAGGCCATT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:26db45efd383
|
40 | — | — | — |
|
GTTAATTATCGGGTGATGCCTCTCCCTAATTAGGCAACAT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:2528147ac4cf
|
40 | — | — | — |
|
GTGCCTAATTAAGGGCATGCCCGACTAATCACCACTTTGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:3028d9c0431f
|
40 | — | — | — |
|
CATACTAATTACTGATGTATCACCTTATGTGGTACTAACG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:9af8ae753a98
|
40 | — | — | — |
|
ATTACCGTCCTAATGATTACCATATCTGGACGTGACAGCC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:b72edcce6d2a
|
40 | — | — | — |
|
GGGACCTAATGACCGCTAATCGACGCCAAATTAGGACGTA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:055a53f43ce0
|
40 | — | — | — |
|
TAGGTTTGCCAACACCATTTACGGCATAATTACCACTGCG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:5f6733f32ac3
|
40 | — | — | — |
|
GATGCTCACCGCGATGACAACGCCATTACCTAATTAGGTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:3b2c1ccd75c8
|
40 | — | — | — |
|
CAATTATCATCACGGGACGAACACCAAATTAGGGTAACGT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:7f1fe1e4be9d
|
40 | — | — | — |
|
CAAATAGGGCATACGGGAACGTCATTAGGCGTACAGTTGG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:1d0e3d6aeff9
|
40 | — | — | — |
|
AGACCTAATTAGGCGTGGCACAGTACCGTCTAATTACCCA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:5b3e5b790c03
|
40 | — | — | — |
|
AAATGATTCGCTAATGTGCTCATTGCCACATATGGCGTGT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:2f131a8d81e3
|
40 | — | — | — |
|
AATTACGATTGCCCTCTACAACGCCAATTAGGGTCATCGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:c4fa27f75032
|
40 | — | — | — |
|
GGTAATACCAATTATGGGCCTTAATTACAGTTCCGACGAC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:1417bab07ec3
|
40 | — | — | — |
|
CCAACTGACCTAATATGGACTAATGCACACCCTAATTAGG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:1cf43870ac73
|
40 | — | — | — |
|
ACCGCCACACCAATTATGGTGTCCCTAATTGACTAATGAC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:f1a3d1736a1f
|
40 | — | — | — |
|
ACACACCCCCTAATGACCGCATAAGGCAATCAGCAAGCAG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:f3dc33530690
|
40 | — | — | — |
|
ACCAACGTTTCTCATTAACCTCATATGGTCACTACTAATT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:cf2264c21900
|
40 | — | — | — |
|
GACATAATAGGGCAAAAATCAATTAGTTCACGTGTAACGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:9e7e1c243ccf
|
40 | — | — | — |
|
CATATTAGGTAGCCTAATTATCATGGCCCTACTCTCAGGT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:b66b885c7478
|
40 | — | — | — |
|
AGCTGGGACGTAACTCATGCCAATTACGGTAATGACATCA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:5d009baa66ec
|
40 | — | — | — |
|
CTAATATGGCCTAATGACCCTGCAAATAGCTGCGACATCG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:abd8ae0556a1
|
40 | — | — | — |
|
TGTTAATTGACACCATTTAGGGCATGTGACCGTTAGCGCC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:f074798d9076
|
40 | — | — | — |
|
AACACCGACAACACCCTAATTAGGTACTGACAAGGTAATT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:342e26c5ab3c
|
40 | — | — | — |
|
TATCCTACTCCATAAGCACGCGCATTACCTAATTAGGGAT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:db0c9259adc0
|
40 | — | — | — |
|
ACAACACGACCCATTTAAGGACAATGCGACATGATTACCT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:d8cbe14f0580
|
40 | — | — | — |
|
AGCTAATTATCCATACCAAAGAAGGAAATCCATTATCGTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:7d7bcf39437c
|
40 | — | — | — |
|
TGCCTTATATGACGCGGTACATTAACGATGCACGCACTAC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:b79dac7894b2
|
40 | — | — | — |
|
GATACCGCACTTACGTAGCAATCATCGCACCATTTACGGC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:670ec5e71d49
|
40 | — | — | — |
|
GCCACATGCTTCCATACATGGCACGTCATTAGCATTATTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:365bd996979b
|
40 | — | — | — |
|
GCAGCTATCACCATCACTCCTTGTAAGGTTAATTACACCC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:6c68e8e9d32e
|
40 | — | — | — |
|
CCCTAATTAGCAACGGGCCTAATAAGGTCTGCGGCACTTA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:12259ed95fef
|
40 | — | — | — |
|
TCAGCATCCCTAAATGGCGCTAATTACCTTACGCTGACAG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:cc232333fa8e
|
40 | — | — | — |
|
TAATTGCGTACTAAGGTTCCATGACCATATACGGACTTAG
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:5b73c68b47e8
|
40 | — | — | — |
|
CACCTTATTAGGCAATGCACCTCTGTCATTACGCGACTTA
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:f294184619c9
|
40 | — | — | — |
|
ATCACGCTACCCAATATGGTCATTACTGGAACTAAGTGCC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:89bdd1a66bc4
|
40 | — | — | — |
|
TAATGACTTAGGACTACTTTGATACCATAAATGTCGCGTC
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:81f02d5e8698
|
40 | — | — | — |
|
ACTACGCTTTCCTAATTAGGCCATACATCACCATGTGAAT
PANAPTA:P14652:HOXB2_SRF:PRJEB66722:R3:20345b0f18d8
|
40 | — | — | — |
SELEX rounds
R3 ·final