HOXB5_TGIF2
CAP-SELEX sample TGIF2_HOXB5 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTGCAAGCATGATAACCATATGTCCCTGCAGTTATGTCTC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:8dc546ed04d8
|
40 | — | — | — |
|
AGTGACCTCGGTTAAACTGTAAATCTTACGGTCTGTAATG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:2b966b5b3b6a
|
40 | — | — | — |
|
TGCCATTCATAGCGCTATGAAAAGGACGGTGTCTTTCAGT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:d9788882cdf2
|
40 | — | — | — |
|
CCCGTTACCTGAACTCCAAGCATTCGAGACTAAGCCAGCC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:f097524e69cb
|
40 | — | — | — |
|
GTCATTAATCGCTATTTAATGACGCCTCGCCCCTCCCGGT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:36ac85a6a2c9
|
40 | — | — | — |
|
GCGTGTAGCGTTACTTCATAGTAGTCTATTGCGAACTCTC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0ec4daac79a4
|
40 | — | — | — |
|
GTACGATATGTCATTAAACCATTAATGACGTGAATGGCGT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:756835727805
|
40 | — | — | — |
|
GCAATACGGTGAGGACGAGCCTCAAACGCCGTTGAGCGTT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:49df6741e9a3
|
40 | — | — | — |
|
GATGCAAGAGCTTTCGCTACCCGGCCCTTTGAAAGTAATG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0bc9418517d9
|
40 | — | — | — |
|
GCGCCGCACAGTGGTTGGGGACACGTGCTCGAAATGAGTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:2bc572125190
|
40 | — | — | — |
|
AGATTATTATAGCGGGGCGGCCGGGCCGCCTGTTCAAGTG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:8c136ecaae34
|
40 | — | — | — |
|
CTGTTCCATGCATGACAAGCGCGATCAAACTAATTTCACC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:4bdea9d686a5
|
40 | — | — | — |
|
GGCACTGCTAGTTCCCAAGCACACCGATTTGCATTCCCCC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:8932e9f6756f
|
40 | — | — | — |
|
TAGCTGTCCGGGTGAGCCACACATTTGTGCCCGGACTACG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:584eec90c175
|
40 | — | — | — |
|
GGTCGCGAATCGAGACCGATTCTCTTTTTCGTTCGCACCA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:11591c9da301
|
40 | — | — | — |
|
CCCGGCGGTGAACATTTGCGGCAACGTTGGCATTCACCCC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0cddfa2ba90f
|
40 | — | — | — |
|
CAGCTCAGCTGTGAACTCTGGCAGCCACACTCCATGCGTT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:2c72c3d49947
|
40 | — | — | — |
|
ATCTGTATTGAGGGCACACAATCATCTTGACAGGTGAAGC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:3924b85035a1
|
40 | — | — | — |
|
GAGCGACTAACATGGTCCTTCAGCTCTGATCTCACATCAG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:48ededeead73
|
40 | — | — | — |
|
CCCCGCCAATAATCCCTAATGTGGACACAACAAATATCGG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:136ab7da8bb5
|
40 | — | — | — |
|
GGATTCTGACACGATGTTTGATTGGTTGCATGACGTGGTC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0b2b32cea6d0
|
40 | — | — | — |
|
ACCCTCTGGCCCTTTAGCTGAGGCTTGCGCCATCTCTTTT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:3d97cbc61667
|
40 | — | — | — |
|
TGTACTCTAGGTGATTTGTTGATAAGTGTACCCCCTTGTC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:20756732618b
|
40 | — | — | — |
|
GACCCGCCTTGCCCCTCTCAGCTGCCAATGCGCTCACTGT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:deb29772fd29
|
40 | — | — | — |
|
GGCACGAACTCTTGACGCATCATAGTGCGACTTAATCGCG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:77d3a5f8df26
|
40 | — | — | — |
|
GAGCACGGACAAGATGCAACTCCGGACAGGCAGATACTAT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0bb84f5e012a
|
40 | — | — | — |
|
CGTGGAAGTCCAACTCCACCCCCGCGTCCATGTCTCCACC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:7382c23672ca
|
40 | — | — | — |
|
TTTATCTTTGAGGCAGCGCGACGCCCTGGAATGAATTGTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:7b103e08d7ea
|
40 | — | — | — |
|
GAACCAACGTATAGTGCTGGCTCCGAAGTACGAACTCAAC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:355e7b00294a
|
40 | — | — | — |
|
ATAGAGGCCTGACCCCCCGCAGCATCGCACTCGATCCGCT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:bfc597cdf6cb
|
40 | — | — | — |
|
GCATGTGCAGGGAAAACTGCTTAATTCCCCTTGCTCCCCA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:a89e271cd80f
|
40 | — | — | — |
|
CTGTCACTGTACTGGTTATCTAGATTTGACGGGTGGGAAT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:861c64404621
|
40 | — | — | — |
|
TTTTTACGGATGCAGTTTACCTTTATTTTTCGAGGATCTG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:c276878632e0
|
40 | — | — | — |
|
CAAGACTTGGAACCGACTGACACCGTTAGTAATGTCAGAT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:a569b797a873
|
40 | — | — | — |
|
AGATATATATACTAACGAATCTAAGAAGGGTACGTAAGTG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:74435c78156d
|
40 | — | — | — |
|
ATAGAAGATTCTTTTTTAATATTTAGAAAACCCACTGTTC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:6c04138252a2
|
40 | — | — | — |
|
GCGGTAACACTACAGGCGTTAGTCAGCTTAGTCGGGTTGG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:61e41692df9e
|
40 | — | — | — |
|
AAGGACCCCTAGCATACATAAATGATGGAGCATAAGACTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:600ff510c110
|
40 | — | — | — |
|
CATCCGACCCTGTCGCGCCTGACAGAATCGATCACCAACA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:8b630d691cd8
|
40 | — | — | — |
|
ATCATTGCTCCTTTTAATTTCACGGAAATAGCTTGACGCG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:8feb867337d6
|
40 | — | — | — |
|
GAAGTCATGATCTAGCCAGTTTCGCTACAGCAGTGCGAGA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:7daa1c7fd681
|
40 | — | — | — |
|
CCAATCACAGGACGTGAAAGCCTGTGCCCAGTATCGTCAG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:826d30904f8d
|
40 | — | — | — |
|
AAACGGCACTGTAATGGAGTCCCACCGCAGTATAAACATA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:0fb9cc06898f
|
40 | — | — | — |
|
CTTGAAGCAAATGCCTACATAATATAGACTTACCCTCCTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:86cf74571c7d
|
40 | — | — | — |
|
CAGATATCTGGATAATTCAAAGGAATGAGTTTATTTATGT
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:d2eb589bf10a
|
40 | — | — | — |
|
CTGACTAGCATGATGTGATAATGTGGCGGTGCTTTAAGAC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:2dc8236673dd
|
40 | — | — | — |
|
TTTAAACTATTCTCAACGGAGCGTGCTTTATCCATTGGGC
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:c1ce230b66a7
|
40 | — | — | — |
|
GACGATAGGTCGGACGTTTTTATAGTTCGTAGGAGCAGTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:364d12b0810b
|
40 | — | — | — |
|
TTGCCGGGGGGAGCCACAAAAGTGTTCATGATTGTGATTA
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:ede56036524a
|
40 | — | — | — |
|
TGTGGTGAATTGCGTCTTTATACACAGCGGTTCCATTTAG
PANAPTA:P09067:HOXB5_TGIF2:PRJEB66722:R3:ea47117d3791
|
40 | — | — | — |
SELEX rounds
R3 ·final