HOXB5_XBP1
CAP-SELEX sample XBP1_HOXB5 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCCACGTCTACTCTCTCTTACCTACGCTAATGCGAAAATA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:7c4f99c0fdd5
|
40 | — | — | — |
|
TGTGTACGCTTAATCGAACTATAATTGCCAACCAAATGAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:f18c56515b0b
|
40 | — | — | — |
|
CGTGACGTGTCACGTCATGTCAAGGTATGACGTCGCAACA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:b92bdb9066eb
|
40 | — | — | — |
|
TTCCTTGTGTTCTCTAGCATCGCCCCTGGAGGTAACCAAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:bc40818a65c3
|
40 | — | — | — |
|
TGCTCCACTAACCAAGCACCAGACGCAAACTGCTACACAA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:f644e0419e23
|
40 | — | — | — |
|
CTAGGCGCCCTAAGATCAATAGCGTTTCAAACACCGAATA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:af520baebdbe
|
40 | — | — | — |
|
CGCCTCCGGATACCCCTAAAACGCACAAAAAGTATCTCAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:2edebbd15adf
|
40 | — | — | — |
|
ATGTCACTACTACCTGCTTTACTGACACACCGAAACAAAG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:1518f46ac2e8
|
40 | — | — | — |
|
CTGGAGGCAATGATAATCAGATACGCAGCCGGTGCCACGG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:161a311d7003
|
40 | — | — | — |
|
GTCATTACCACCGTAATGACACGTAACAGCTCACTTAATG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:be3b2f634be1
|
40 | — | — | — |
|
AATCACATAGCCGTGGTACACGTGTACATTCGCCTCGAGG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:5f67e30d56b0
|
40 | — | — | — |
|
ATTCGTCATTAATCGTATCTATTAATGACACCTAACCATA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:673f3afc75c4
|
40 | — | — | — |
|
GACACTCTCCCGTCCCCTCGTACCCCCATAACGTGCTGCC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:500240b6e7ab
|
40 | — | — | — |
|
AAACACTAATGGCATGTATCGCTGCACCGAAACTCAGCTT
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:684f21c06b63
|
40 | — | — | — |
|
GGACATATTGATGACGTTAGCGTAACTCGACCTGGTCGAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:656d3f580fbe
|
40 | — | — | — |
|
TCCCTAAGACAAAGATCGTAAATGCATAATGACGCGTCAG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:a9e06d27bd8b
|
40 | — | — | — |
|
CCCAGACTGTCATTATCAACGGCGATGTGATAATGACCAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:55a8746ee615
|
40 | — | — | — |
|
TATTAACGCACCCTGTGCTAATTAGTTGTGACTAATTAGC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:a14d0704e373
|
40 | — | — | — |
|
GGCAATTAGTTCCATGGAGACGTGAGTCACTAATTGTCTA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:ed1b0a2241ba
|
40 | — | — | — |
|
ACAGCAGAAAACCAATAATCACCCTAAGACCTTCGGGATA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:7934564f7c4a
|
40 | — | — | — |
|
TGCACACGCGACCGGGTCCCCCCCGAAAGGAAGGAGCCCT
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:36821e86e978
|
40 | — | — | — |
|
GCACATGGACACTATGTCTGACGTCATGCCAAGCGCAGAT
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:d5b4d5ab9f1a
|
40 | — | — | — |
|
ACTTCCACATGGCTTAGGCAACATTGCAGCAGTCGGTAAG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:d7823e1bcf1b
|
40 | — | — | — |
|
CAGTGGTCTCGTTTTCGCGCTAATTACGGCGTTGTGATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:f4c727d17889
|
40 | — | — | — |
|
GACACGTATGCGCAACGTGCTTGCTACCAAATGCTCCCCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:e1fa53b112d7
|
40 | — | — | — |
|
GCAAAGGTACAACCCTGGTTATACTCGCTAACGACAGGTG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:85089aa25545
|
40 | — | — | — |
|
GCCAAAGGGACCACCATTTTCATACCGGAACCCAGATACA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:2ba405908d1f
|
40 | — | — | — |
|
CTTACCACGCTTCACGTATAACACGTTCGTCGTAAGACCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:273023442d0a
|
40 | — | — | — |
|
GAAACAAAACTCCATCGAACTTGTGAACACCTGGTGCTCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:06adf096cb06
|
40 | — | — | — |
|
GCCACGGCATCCACGCGACGATGAATCAGGAAATGTGCCT
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:3156e4d7aac9
|
40 | — | — | — |
|
GCAATCCCATATTCTCAATCGCACACACGTTATGACGTCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:fd1e39c7d9ba
|
40 | — | — | — |
|
TTTGAAAGAAAGAGAACAGTACTAATCACCCATATATGGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:a14ac7183875
|
40 | — | — | — |
|
CACATTGCGATAGGCGCAATGAAATGATCAGACATGATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:7288c9be5906
|
40 | — | — | — |
|
TCATAGAAGAATACCGTGGTATGAGTTGCCGGATACTAAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:0fc7acb49834
|
40 | — | — | — |
|
ACTTATACTAGGGGCTTTGCCACCGCGCCCCGAGGTTGGC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:8c228a056142
|
40 | — | — | — |
|
TATTGGTGACAACCTCGAATAGAACGAGGGGTAAATGAAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:184e2e92634f
|
40 | — | — | — |
|
AAGAACCCACACAGCCGTTCCACACGAGCTGCCATACCCC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:7a03ff93d88a
|
40 | — | — | — |
|
GGTTACGTGTCCTATCCCAATGTGATTAGAACACGCACCG
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:3da8489cefe3
|
40 | — | — | — |
|
GCAAGCGCGAAGGAACGAGCGACGCGACGCCCTACGATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:a5184546583d
|
40 | — | — | — |
|
CAATAACGCATACCTATCATTACGCAAAGGAGTGTGATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:c8c328bd8fbf
|
40 | — | — | — |
|
ATGCAGACGATACGCGACCTGGTACCATTAATAGTGATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:5648e3ed34b5
|
40 | — | — | — |
|
ATACTTGGCGCGTGACGTGGCAGTAAGTCTAAACGCACGC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:65644087eb63
|
40 | — | — | — |
|
TAACACAAAGACACTCAAGTCCTCTCACACATTAGCATGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:c1deb0941ded
|
40 | — | — | — |
|
CCAGACGCAACAAGTGAATGCCCTCCCCCACTGCCGTTGT
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:2d0c348eb228
|
40 | — | — | — |
|
AACAGTAGGCAATATCGCTTATTACAGCGCATACGTGGCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:c0212136b2fe
|
40 | — | — | — |
|
TCTCCCGCACAAGCAGCCCTCCCTACGATCTTAATGCTGA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:d576ed4ee1e8
|
40 | — | — | — |
|
ACTCATTAGCGAAAGGAGAGTATGCTAATGAGCTCGCCCA
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:6b4e74a3869f
|
40 | — | — | — |
|
ACACGATGGACACGTAGCATAAGGCAGCCACACTGTACAC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:3ee517d8fca1
|
40 | — | — | — |
|
TGCCGTTACGCGCACTCACAGCACCGTGTGCCACCTCACC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:15f3701de3d9
|
40 | — | — | — |
|
CCGCTCTAGAAGCTAGATCGAACCTATGGCTGACGTGGCC
PANAPTA:P09067:HOXB5_XBP1:PRJEB66722:R3:edbc3d177798
|
40 | — | — | — |
SELEX rounds
R3 ·final