HOXC10_NFKB2
CAP-SELEX sample HOXC10_NFKB2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCCAACGACTGCCATAAAATCGCAGTACGTTTTTATGGCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:38848e903dc1
|
40 | — | — | — |
|
ATACGGTGAATCCCCTACACAGTTAAGCGGATTCCCACCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:376090b7119c
|
40 | — | — | — |
|
TTCCGTAATACCAATATGTCCCAAGCTTTCATCGCTGTAT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:c1847bab0c82
|
40 | — | — | — |
|
ATGTGATCGTCCCTATCAGGACTGACCTTAACCACCTCCT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:009e59badd3c
|
40 | — | — | — |
|
GCAGTCCATCCTAAGCTGCATTTCGTCCCTGGACAGGACT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:9bc619d87dd1
|
40 | — | — | — |
|
GTAAAGCATGTGAGATATCTCAAGATTCATTCCTTATTTG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:d3b0cd71ab91
|
40 | — | — | — |
|
ATGTACTCCCTCCCTTGTTTGTTAAGGTAGTACGTACGCT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:dce4726c7c98
|
40 | — | — | — |
|
ATGGTGAAATAGCCCCTCCAGTGTTACAGGGCATTCCCCG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:811ad91e9c62
|
40 | — | — | — |
|
CCCCCAACATAACATCCCAACTGACAGGGATTTTACGTGA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:e72146998496
|
40 | — | — | — |
|
ACTCCGTCCCTAACATAGGTACTACGGCTCTGCCTCCTTG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:4e42a73774e2
|
40 | — | — | — |
|
CGCCGTCCACGTAAACGGTACTTACCCCTCCGCGCTACTA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:acc9c0438cfc
|
40 | — | — | — |
|
TATCACCCTCTGTCCGTGATATAGGGACACCCCCCATACC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:8aa4bac7437c
|
40 | — | — | — |
|
ACAGGTAATTCCGTGTATTACAGTAATTACCCTAGCATCT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:9cc5d40ff470
|
40 | — | — | — |
|
GCATTTTACAGACATAAGAACAGTCGTAAAATGACTCTGT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:09cb694e3df7
|
40 | — | — | — |
|
ATCGCACCTACGTAATATCGCATTTCTACAGTGCTAGCGT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:bdd66c0abec8
|
40 | — | — | — |
|
TAAAATGGTACTACCAACACATACGAGTTTACGTCCACAT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:fe79ebe38dd3
|
40 | — | — | — |
|
TAGATGACAGTAAATCCCGGCAAATGTGAGGATTTACCTT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:1e073a49e1e3
|
40 | — | — | — |
|
AGTAACGTCCACAGCCGAGGCTGGTACTCCTCTCGGTCCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:8a0caf2a900e
|
40 | — | — | — |
|
GTACATTTGTCAATTCACCCATGTATTGAGGGGAATTTCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:11f398d0c4de
|
40 | — | — | — |
|
GCGTTGCGCTTTCTTATTACCCCTTTTTGTGGGTAATAAC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:3d8b76b00845
|
40 | — | — | — |
|
AGACGGTAATTCCCGCGGCTTATGAATTCCCGTAGTCCGG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:21a1758fd223
|
40 | — | — | — |
|
TGACCTACGTCCCAGTACAGTACTACGGGTGGTATACATA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:a2bdd0f13913
|
40 | — | — | — |
|
GAAGGTACTGACTTCGTGACACGCAACGTCCCTTCGCACC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:e28d65bbab44
|
40 | — | — | — |
|
TGTGTTTCCCCTACCAGTGAAACACTACGCGCGATCCAAT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:6784e59ba196
|
40 | — | — | — |
|
TTCTCACATTATCACTCCCTGCTGGCTGGAGAAGATACTG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:774a28a7cd7d
|
40 | — | — | — |
|
GCAGTAATCACCTTTTCAGTGATTACCCCACAACGTCCGA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:667d7f8054f4
|
40 | — | — | — |
|
TGATCGCACGCCTTGTCGTCCCTATTAGGTACTGGGCTCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:c97db3ef6e89
|
40 | — | — | — |
|
CTGCTCGCAATCGTGTTTTCCACTGACAGGAAAACTCCAG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:376c1932ac2d
|
40 | — | — | — |
|
GCGTGCTAAAAACACCTACTCCAAGGTTACAGTGTTTTGA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:62089e20fef4
|
40 | — | — | — |
|
GAAGATGCTAAATTGGCCCTAGACCGCTCCAATGAATGGC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:1a749b9f1bd2
|
40 | — | — | — |
|
AATGTCGCGTATCCTACGCTTAATCCGTGTCAGATTGTTA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:b6d8329c779d
|
40 | — | — | — |
|
ACAGTGGAACCCCACTTATTCGGTGGTTCCAAGAGATCGA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:ebd84db298f5
|
40 | — | — | — |
|
GAAATGATAAGTAACTCCCACAGCAAGGTGATTACTATCG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:83fb3a494da0
|
40 | — | — | — |
|
CCAGGGTGAAGGCCCACCATTAGATACAGTCCTTCCCCCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:e364ccaea3d5
|
40 | — | — | — |
|
GCACTGAGTCAAATCCCACAAGCATTGGTGATTTCACGAG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:fbdc53732bee
|
40 | — | — | — |
|
AGCCTACACAATTTAACTCTGTCGTTTGATTTAAGTGTGA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:a045a250421f
|
40 | — | — | — |
|
ATTCGCTAACGTCCCTCCTTGTTCGGAGGTACTTTTCATG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:d8d246ee3a12
|
40 | — | — | — |
|
ATCGCAGTGGTTGCGTCCCAAGTAGGTACTTCAGTCTTTG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:adf28c0cf9e4
|
40 | — | — | — |
|
AAACGACAAATGCGTCCCTAGCTCACAGCGAGGTACTAAG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:e0353a481659
|
40 | — | — | — |
|
AATTACGTCCCACAAGGACTTCATGAGCAAACAAATCAAA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:589699282d05
|
40 | — | — | — |
|
CGTCGACCATGTGGTTCCCCTAGACTATGTTGAACCCCGT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:c02903d3ec56
|
40 | — | — | — |
|
CACTCACCCCGCTGATCAGTGGTGAGACCCGCCCTTCAAA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:99258074195a
|
40 | — | — | — |
|
ATACCGTCCCATAGGTACTCCCCGCGCCGTACATCTATCC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:b4f2d48bcf3d
|
40 | — | — | — |
|
GGTCAAGTAAATCCCGTTATAATGTGGGGATTTCCCCCAT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:e064758084ae
|
40 | — | — | — |
|
TCCGCGTGCGTCCCTACAGTACTTCCTCCTTACGAGTTGT
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:716184bf479c
|
40 | — | — | — |
|
ACCAAAGGGGAAATCCCTCACGACCCACGTGACTCTAGCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:edb4ff991a47
|
40 | — | — | — |
|
GTATACGCGGTGCTTCTCCCGAAATCGGTAAAGCCCCCCG
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:da49c2a0f943
|
40 | — | — | — |
|
GGGTCGTGATTACCCGCGTCCCTGACAGGACTTGCCCGCC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:d072f2758051
|
40 | — | — | — |
|
ACGTTATTACTGCCGATTCCTCACTCTTTACGAGCCACGC
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:0d935f399b54
|
40 | — | — | — |
|
CGCAGTGTTCCCGAAGCTGTCTTCGTACACCCCAGCTCCA
PANAPTA:Q9NYD6:HOXC10_NFKB2:PRJEB66722:R3:fc4e7e583ef2
|
40 | — | — | — |
SELEX rounds
R3 ·final