HOXC10_PAX1
CAP-SELEX sample PAX1_HOXC10; Mixture-SELEX sample PAX1_HOXC10 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGTTCCGGTCCATTAATGTTTATTACGTTGCCGGACACTT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:0d743ee5f1c2
|
40 | — | — | — |
|
ATGTGCTCGTTTATGACATGCATTAAAATTTTACGATCCA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:e73bd592ac18
|
40 | — | — | — |
|
CACACATTTGGTGAATGAACATTAAACTTAATGGCGCGTG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:7ab00ba8a257
|
40 | — | — | — |
|
GCGGATTCGACGGACTGTAACGCCTCATTAAATTTAACGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:15650043a1bf
|
40 | — | — | — |
|
CAACAGAGGTGATGGTCACGGACCATTAAACGTTAATGTC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:fcc7e2062418
|
40 | — | — | — |
|
AAGTGGACCGGTCGTTAACCGTCCGATGCGCCCCATTAAT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:3482054a5c6b
|
40 | — | — | — |
|
TGCCGAACCGAACATAATGTGCGTTACGCCCCATTAACAC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:36c7ce57813a
|
40 | — | — | — |
|
CGATCCACTCAGCTCGTAAAAAGTTAACGATGCGTTGCTG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:18245a27a1fc
|
40 | — | — | — |
|
CTAACGATCCCCGTCACGCTCGATAAACTACCCGTATACT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:b8e6a9588467
|
40 | — | — | — |
|
AGCCAAGCGTAACGGTTTTACGATGCTCATTAAAAAGGCG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:33d81da41b4c
|
40 | — | — | — |
|
AACCAATGTTAATGAGCCGTGACGAATGTGTAACGTTTGG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:5d956541574d
|
40 | — | — | — |
|
AGTTAATGAAGCGTTTTATGACCCAGCAATTAAGCGTAGT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:4119caf0b1ee
|
40 | — | — | — |
|
CAACTCAGCGTTACTCCCTCGTCACGGACCATTAACTCGG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:2f2e9ad4bcbc
|
40 | — | — | — |
|
AACCGAAAATAGGCTACTAACACAAAATTAATGATCCGTA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:02f057c86e97
|
40 | — | — | — |
|
ACATCGTAAAACCTCGTAACCCGTCATGGATGAGTTAACG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:8432e0b5a499
|
40 | — | — | — |
|
CCATATTTTATTAATCCAGAACTTAATGGTCCGTAACGCG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:b5ba79907387
|
40 | — | — | — |
|
ACGCCGCGCACACCCACTAAATAGTTAACGACCCGTGACG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:c1f56c4a49ac
|
40 | — | — | — |
|
TTAGCCGTCACGCATGATGGCTTTTTATTACCTATTATCG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:46db28939f8d
|
40 | — | — | — |
|
GCGCAGCTATTGTATGTCATAGCGTCACGGCTCATTAACA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:59a5af7a4ebf
|
40 | — | — | — |
|
TTTATATGACCACTAGGGCTACGCTTCACTGATTTTACGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:0682dd30e7bb
|
40 | — | — | — |
|
CACACACCCGTCCGTCACAGCTCATTAATTTTCAATTACT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:d605a49adf59
|
40 | — | — | — |
|
AAGACCTCGTAAAGCCGATCGTAAAGCGTTTTATCGCCTC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:b10451ed0acb
|
40 | — | — | — |
|
CCGACACGCCCCATTAACCCCACAGCTCATTCGTTTGATG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:ef2babae88fc
|
40 | — | — | — |
|
GTCAATCTTCATATAATGAAGATTAATTGGCCATGACGGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:7c270a962f46
|
40 | — | — | — |
|
TATATAAATGTTAAATCGTGCGGAACGAATTTAACGACAC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:3a091fc084a5
|
40 | — | — | — |
|
ATGGCCATAAAATAATTTTATTGCCGATCCGTGTGGTATA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:b65be6e496a2
|
40 | — | — | — |
|
GCATTATTTATGGTGCATGACCCGGGTCATAAAACTATGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:8099415c4bbc
|
40 | — | — | — |
|
ACCCCGATCCTCATAAAAGTTAATGATGTGTATCCAAACC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:85b378f376ef
|
40 | — | — | — |
|
CTAAGACCATAAAACTTTTATTACCCTGATACGACCTGCC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:a2b6adb12c22
|
40 | — | — | — |
|
ACTTTTAATTACGTCCTCTCCGCTTCATTAACCTTTATTA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:a912c3e4a10a
|
40 | — | — | — |
|
TCCTCTACCAATATTAATGATGCGTTTAATGACCGTTGCT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:6c1b771b5571
|
40 | — | — | — |
|
ATCGGACACGCCTCGTTAATCACTGCTGTTTATTGCTTCG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:558c08a35b8b
|
40 | — | — | — |
|
TCACGATGCTATTGCAGTCATGCGTGGTTAATGGTCTGTT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:75b10c87a698
|
40 | — | — | — |
|
CGCGAACGCTCGTAAATCCAACAGTTATGGCCCATTAATC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:89e05e4ff028
|
40 | — | — | — |
|
CAACATGTATACGAGTTGTCGTAAAACGCAACGATCCGTA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:bc72e5745543
|
40 | — | — | — |
|
TTACTGTTATTGGTCACGGATGACTGGCAACGTCATAAAA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:36573b10ef0d
|
40 | — | — | — |
|
ATACCTCTGAATGTACGTCCTCCGTTACGGCCCATTAAAT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:3d9805f314ca
|
40 | — | — | — |
|
CAGGTGAGGTCATAAAATAATTTTACGACCATGACGATGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:ad4894630067
|
40 | — | — | — |
|
TTCGACACGCCCCATTAAACGTCAAAATAAAACCCTTAAC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:7a78e8111b08
|
40 | — | — | — |
|
AGGCCTGCATTCGTCACGGGCCATAAAATCTAGATGGCAG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:1611b61f2295
|
40 | — | — | — |
|
TCCAGGACTGCTTATAATTAATGACCCATGACCAATAACT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:49afcb7d8168
|
40 | — | — | — |
|
CCACGTGTCACGGACCATTAACAGCAAAGTACGCGCCTGG
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:e4fc840069b9
|
40 | — | — | — |
|
GCTATTAATGGGGCGTGACCACGTAGGGGTGCGTCGATAC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:39761aa4585a
|
40 | — | — | — |
|
CATCGGACGTATGCTTAATTATCCGTGACGATCCGTTCTA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:25cdc346a313
|
40 | — | — | — |
|
TCGTTCAAATTATTAATTGAGCGTGACGGAACACCAGTTT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:9a2d19bfc437
|
40 | — | — | — |
|
CATTGTACTGTCGTAAAAAACTTTACGACTACCGTCTGAT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:fce34483c93d
|
40 | — | — | — |
|
TCAACGTCACGGATCGTTAACCTTAATATCTGCATGCCTT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:35f5cafeed69
|
40 | — | — | — |
|
GAACCGTAGACCTATGCGTCGCCGTTACGGGTAATTAAAT
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:907402e7dd96
|
40 | — | — | — |
|
TCATTCATTAGATTTAATGGTCCGTGACCACTTCTCATAC
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:38fef6028604
|
40 | — | — | — |
|
GTTGCGACTGGCTCAAGTGCCCGACACGCCCCATTAACGA
PANAPTA:Q9NYD6:HOXC10_PAX1:PRJEB66722:R3:a70cd8658c58
|
40 | — | — | — |
SELEX rounds
R3 ·final