HOXC11_IRF7
CAP-SELEX sample HOXC11_IRF7 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CAATCGAAAGTCGTAAATACATTTTCGGTTTAGTGTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:bb0fe46953d6
|
40 | — | — | — |
|
ATTTAAGTAAACTCGTTTTTTACGACTTGTTTCGATTTTC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:7832b69258bb
|
40 | — | — | — |
|
CAAATCGAAACTGGGCCAACCGTTTTATGATCATTTTCGC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:973bfedab62a
|
40 | — | — | — |
|
CCTTACGCTGCTTCGTTTTCGTTTTGCGACCATGTTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:a7970de7de01
|
40 | — | — | — |
|
AAACCGAAAATACACAAGAGCAACTCGAAATCTGTTTAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:533201099793
|
40 | — | — | — |
|
TGCGCTTTCGTTTTGGTAGCGATTTCAGCACACATTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:c920a0c0c9a0
|
40 | — | — | — |
|
TTCACTTTCGACTAGGGAATTTATGGCTACGCAATTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:35d722d7ef4a
|
40 | — | — | — |
|
GATGCAGTTTCGTTTTCCCCTTGCTACTTGTCAGTTTAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:2ded95c353be
|
40 | — | — | — |
|
TTGGAGTTTACGACGTTTCATTTTCGTTTTCTAACTTGAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:b225bff2b17b
|
40 | — | — | — |
|
CCACGTGTCGAAAACGAAAGCACACCGTCCCAGCATTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:13e7050c0785
|
40 | — | — | — |
|
CATTTTACGATCCCCTAAAAAACGATTTTCGATCCATTGT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:969c7f5f6906
|
40 | — | — | — |
|
TAATCAGCTGTTTCACATTCGCTTTCGTTCTATCGTTTAT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:eed8817b7add
|
40 | — | — | — |
|
TACGAAAGCGAAAGCTATATGAAGTAAGTCGTAAATAACG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:c5dca5fac4bb
|
40 | — | — | — |
|
CATTTAATGGGTTGTCGGTCTACTTTCACTTTCGGTAACG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:9bce5d0a4088
|
40 | — | — | — |
|
TAATTTCGAAATATGTGACGTTACATCTTCCTGAACACGT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:a4c4d6e106e0
|
40 | — | — | — |
|
TATCCGTTTTTACGAGTTTTTGCTTTCGTTTTGTTATTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:085e3aa8aff6
|
40 | — | — | — |
|
AGGAAAGCGTCGTAAATATTGTGAAATTAGTTTCACTTTC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:4637f3936cdf
|
40 | — | — | — |
|
GAAAACGAAAACTGTCGTAAAATGCGATTGTAACAACTTG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:dacb029bd5b5
|
40 | — | — | — |
|
CCAAACGAAACACGAAAGCGAAAGTGGGATCAAGCATATT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:459e9ec4a8bf
|
40 | — | — | — |
|
TTCGCTTTCGAATAAGACCGTGATTTTACGATACGATACT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:66a5c7f84d59
|
40 | — | — | — |
|
ACATTAAATTGAAAACGAAAGTTAAGATGGTGATTTTAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:e11a7de0d638
|
40 | — | — | — |
|
TTAATGTCGTAAAACCAACACACACTTTCGTTTTCGTGCC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:fd267ca34c30
|
40 | — | — | — |
|
GCGTTTATTTTCGACTTGCGCATTCCGTGTCGTAAAATCT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:f57d6fb74330
|
40 | — | — | — |
|
GCCTGAAATCCGAAACTGAAACCGAAATTACGACTTGATG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:036b8e435de6
|
40 | — | — | — |
|
CCATTTTCGTTTTCAATGTTTCGCTTTCGGCTTAAGACCC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:25a7c9e87770
|
40 | — | — | — |
|
TTCATTTTCGTATCCCAGTAACTCGAAAGTGGTGATGCTT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:212598984eef
|
40 | — | — | — |
|
GGAGTGCCCCAAACTTAGTTTCGGTTTCCATCAGTTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:96a638125030
|
40 | — | — | — |
|
TAGTGATTGCCAAATAAAGTGAAAGCGAAACATTCTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:f08f2e59a74d
|
40 | — | — | — |
|
TTTTCGATTTGCTCATTTTCACTTTCGCTAGCATCATCCA
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:b85fe14e105c
|
40 | — | — | — |
|
TATTTTCGGTTTATTCGTTACCGTGACGACAGGTTTTTAT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:f46e2e619f0c
|
40 | — | — | — |
|
GAATCGAAAACGTAACCAGTAAAGTTAATTACAGTTTTCG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:52af6f4f1b38
|
40 | — | — | — |
|
CGAAACTGCAAAACGAAACTCTTTATAAACACATTTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:f98254635670
|
40 | — | — | — |
|
CGTTAAAATAATGCCGTTACTTTCACTTTCGTACGGTATA
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:c74effc64c6c
|
40 | — | — | — |
|
AACGAAAACGAAAAAAGTCTTAAAACTGGACGCAATTTAT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:30e8ed130829
|
40 | — | — | — |
|
GTGTGACTTTACGACGACCGAAACGATTTTCGATTCAAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:bdd12dd2fdc5
|
40 | — | — | — |
|
TTTCGGTTAAGGCTTTAACAAATCGAAAATATACATTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:d8be30181e69
|
40 | — | — | — |
|
TTCACTTTTTCATCAAAACGAAACTTGACTTTGAATTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:aa7505bc7787
|
40 | — | — | — |
|
TGAAGCGAATAATGCGAAAACGAAAATAGAGGCTATTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:52011ef37afc
|
40 | — | — | — |
|
GAACGGGCTGATTTTATTGCTTTCAGTTTCGTTTCAGCGC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:93aee9a27318
|
40 | — | — | — |
|
ACCTTAACTTTCGTTTTCCGGTTGCACTTTCGTAGTGGGA
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:79c073a09e76
|
40 | — | — | — |
|
TTTTTATGACCTATTACGTCATTTTCGATTTGTAGTGAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:1c8e266c8f29
|
40 | — | — | — |
|
GTTTCTTTCACTTTCGTTACGAGGCTACATCGTTAAAAAG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:8d0c5bc03484
|
40 | — | — | — |
|
CGCAACGTAAAGCGAAACAGAAAATGCTATTAAAATGAGT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:7fe8c4c8a1a2
|
40 | — | — | — |
|
TATACTTTCGTTTTCGCCACGATGAAAACTTGAAGTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:6314048799ea
|
40 | — | — | — |
|
ACGTATTCCCTTCCCTTTTTCGCTTTTTGTTTTCGTTTTC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:781bd76e8dec
|
40 | — | — | — |
|
GCACATTTCGGTTTCACATTCGATTCTTTGTTATCATAAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:f5d10eaa3edb
|
40 | — | — | — |
|
TAATTGGTTACTTTCACATTCGTAACGTTAAGTACTTAAT
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:1fa1ef5e3f78
|
40 | — | — | — |
|
GTTATTTTCGATCCGAGATGTGAAAACATCAATAAAATTG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:da5f357e43de
|
40 | — | — | — |
|
GTAACGACTTTTTCGTTTTCTAATCGAAAGCGTATTTAAG
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:de95e71719e1
|
40 | — | — | — |
|
TTCGCTACACGATAGACTGGATTTTCGTTTTTCTTTTTAC
PANAPTA:O43248:HOXC11_IRF7:PRJEB66722:R3:9186fb80492d
|
40 | — | — | — |
SELEX rounds
R3 ·final