HOXC11_IRF8
CAP-SELEX sample HOXC11_IRF8 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCAGTATCGACGCGGTATCGACGGTCATAAAACTGGTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:23180bf93374
|
40 | — | — | — |
|
GAACGAAACTAAGTGAACACAAGCTTGAAACTGATTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:96f6ed0f531d
|
40 | — | — | — |
|
TTCGGTAAGCCATAAAACACTTTCGTTACTGTGTGTTACT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e7efbab0c237
|
40 | — | — | — |
|
GACAGACAGGAGTGACGAAACTGAAAGTCGTTTTATGACC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:7e0032c8125d
|
40 | — | — | — |
|
TACGCCCCACCGACTACCGAAAGCGAAAGTAGTCTTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:6da4b582d315
|
40 | — | — | — |
|
TTACGACCAACCGACGAAACTGAAACTTGGAAGGTTTAAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:d3c602c3e93a
|
40 | — | — | — |
|
AGTAGTGAACCACGGATCATAAAACGGAACTTTCGGTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:cae1497847eb
|
40 | — | — | — |
|
CTTGAATATCGAAAGTATTTTTACGATGTGTGAAACAATG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e917227cd57c
|
40 | — | — | — |
|
TTACGACCCTACGCTCGCTCAGAGTCGTAAACCTGCCAAG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:809db0894d3f
|
40 | — | — | — |
|
TCCGTTAACTTACCATAGGGCGGACAGTTAACATGTCCAG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:96b9f6cde57f
|
40 | — | — | — |
|
AATGTATAACCAAAGGAACGAAACTGCGACTAGGATTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:0fa7ed405e80
|
40 | — | — | — |
|
CAGTGGTATCGTTTTCGGTTTCGATAATGGTGGTGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:baf523b41ab8
|
40 | — | — | — |
|
GACGCATCGTTAAGGCATTTAAGTACCTTGTTTCACTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:ab98da238511
|
40 | — | — | — |
|
AGCTTAAAGTCCGGTACGCTTTTACGATTGTTTCGGTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:d2ed4b4b0a5e
|
40 | — | — | — |
|
TGAACGATACGAAACTGAAACGGATCTTTATTACCCCTGC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:28a57d91f240
|
40 | — | — | — |
|
TACCGATCGAAACCGAGTCTGAAAGTGATACCTGTTTTAT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:38c0e787a9e1
|
40 | — | — | — |
|
CCCCAATTAACGAGACATCGTTAAATCAGTTTCGTTTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e7ecc6381eb2
|
40 | — | — | — |
|
AGAAACCGAAAGTGGTTTACGACCTGTCATATCTGACTTT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:95ac4ffa248f
|
40 | — | — | — |
|
TGGCATTTAACGATTAGTATCGTGTCATTTAGGTAGTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:a32ef6eb989b
|
40 | — | — | — |
|
GCGAAACCGAAAGTACAGTGTCATCAAAATGACCGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:d9aedae8a40a
|
40 | — | — | — |
|
CATAACGTCTGTGCGCATCGTAAAGTTAGTTTCGGTTGCT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:1415a73c14c0
|
40 | — | — | — |
|
GAAACTGAACTTTACGATCACTCGAAACCAAGCATACCAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:5eba96647847
|
40 | — | — | — |
|
TTCGTTCTACGTGCACGTTGAGTTTCGTTCTCTGTTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:9a8d687eaae1
|
40 | — | — | — |
|
CCGGTATGAAACCAATAGTCTACCTCGTAAAAGCTGTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:8e906708511d
|
40 | — | — | — |
|
TCTCGCTCATTACCGAAACTTGTTATTGAAACTAATTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e66961aff06d
|
40 | — | — | — |
|
GGCCATTGTTATTGATTTTCGGTTTCGAAAGGCTGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:f1d30610806c
|
40 | — | — | — |
|
TTCAGTCACCTGCTCGCGAAACTGAAACTTGAAGTTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:c5dbdcb0e622
|
40 | — | — | — |
|
GCATCGTTAATCAGTTTCGGTATCGCGACGCGTACCGGTT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:a4a0b755ae18
|
40 | — | — | — |
|
CATGCTATCGCTAAAGCAAAACCGAAACCGATTTTTACGA
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:91a5c2c651ce
|
40 | — | — | — |
|
AGCTCGAAACCGTGGATATCGAAACTATCATAAACTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:8737ecb10aa5
|
40 | — | — | — |
|
TCACAGACGTGTTCAAGCAATTAAACCTAGTCTCACTTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:8cbfe4d7ab62
|
40 | — | — | — |
|
GAAACCGAAACTGACGCCATTAAATGGCGTAATCATTACC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:86ebc3ab7cfe
|
40 | — | — | — |
|
AAACGAAACAAGGGCGACCATTTTACGACTTACTCTCGAT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e68e7be6e006
|
40 | — | — | — |
|
CCTGGCCTCAGCGCCAAAACTGAAACCGAAACTGCTTAAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:d4bb53839bff
|
40 | — | — | — |
|
AATTTACGACGTGTTTCATTAGAGCTATCAGTTAGTTTCG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:c3f9be4a5cbe
|
40 | — | — | — |
|
TAGCAAGGAATTTAACTTACCGGAGGGTCTAACAGTTAAA
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:9170ae962c59
|
40 | — | — | — |
|
ATCTCAAGTGGAAAGTGAAACACAATCTCCACACTTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:daaffc11229a
|
40 | — | — | — |
|
TTGAGACTTGACAGGACCACAACAGTTTCGGTTTCGATCG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:2aebb4403af1
|
40 | — | — | — |
|
CGTAAACCTTAAGAATCGGTTTCGAACAAACCGCGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:f1e77f7f7bba
|
40 | — | — | — |
|
ACTCTCAGTTTCGCATCGTAAAAGGGAAAACTGACGCCCA
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:019da45189c8
|
40 | — | — | — |
|
AATGACTAAGTTTAACGATGTGTGAAGTTTCGGTTTTGTT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:d068c17ed737
|
40 | — | — | — |
|
GAAACTAGCCTCATAAAACTAAGCTTACGTTAGTTTCGAT
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:62df1bdc6fbb
|
40 | — | — | — |
|
GCTATAATATCGATACTAATTTATGACAGTTTCAGTTTCA
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:6d2dc6e7d8f1
|
40 | — | — | — |
|
ATCGAAACACCGATTATTACGGTATGAAAGTCGCGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:19e3c9f8893b
|
40 | — | — | — |
|
TTGTACCTCCAACTTGTCACAGACGGACAGTTGTCATACG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:2553ac2b2046
|
40 | — | — | — |
|
GCCACGCGCCTTGCTAACGACGAAAGTGAAACTTCTTAAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:6a875e1b8556
|
40 | — | — | — |
|
CCAAATCGAAACCTAAACTTAACGACTTAGTTTCGTGTTC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:e8815f81a0cc
|
40 | — | — | — |
|
GAACCATCCCTGATCCGGTGAAACTGAAACATAAGTTTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:af8cdd932741
|
40 | — | — | — |
|
GTTACGATTCGGATATGCTCGATACCGAAACTTCGATTAC
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:632b2955e784
|
40 | — | — | — |
|
CGTAAATGTCGCGTTCTTTCGGTTTCGTTGTTGCGTTTAG
PANAPTA:O43248:HOXC11_IRF8:PRJEB66722:R3:bb0ddcc7e655
|
40 | — | — | — |
SELEX rounds
R3 ·final