HOXC11_LMX1B
CAP-SELEX sample HOXC11_LMX1B; Mixture-SELEX sample HOXC11_LMX1B · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CCGTTTACACCTCGTTTTACGACTTTTCGCTCACCCAGAG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:b7128c8fc0d1
|
40 | — | — | — |
|
TGCTAGCTCGATTTTACGACCATCCACTTGGGGCACGTAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:f7887227d69c
|
40 | — | — | — |
|
ATCTTATTTTACGACCTACTGCAAGAGTAGCTTCCACCGT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:5b0dfe6ee6d0
|
40 | — | — | — |
|
ACGTTTTACGACCTAATATCAACATCGCACACAGGACGAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:d745fce52576
|
40 | — | — | — |
|
GTAGGTCGTAAAACTACCAGGAAGCGTACACATGACCGTC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:492683e3b402
|
40 | — | — | — |
|
CAGCTTACGACAAACGTCGTTAAAAGCCAGTAATTAACGA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:55cf6d8b5e9d
|
40 | — | — | — |
|
AGTTTTACGACCTACCGGGCAGTCTACCTAACAATTGACC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:a62c677fe36c
|
40 | — | — | — |
|
TAACACGCTGGGATTTTACGACCTTTTATGTGCGGACCAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:a307298ab858
|
40 | — | — | — |
|
CCCGCCGTACGTACCTTACATACGTTTTACGACCCTTACG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:e4b21eca65d4
|
40 | — | — | — |
|
ACTACGACGGACTGACGTTTTGCACTTTAACGACATTCTT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3876e525009d
|
40 | — | — | — |
|
ATCACACCGTACTTTTACGACTTCATGAGCTACGCTCGAA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:52abae4bacf8
|
40 | — | — | — |
|
CAGTAACGACAGCCACCGCGATACACCTTTTTACGACCAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:a4ebba5ac7bd
|
40 | — | — | — |
|
CCACCAATTAATTGCCAAGTTTTACGACTACACTCCTGCC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3a6a46e46af4
|
40 | — | — | — |
|
TTACGCTCGTAAAACTCATAATTACCCTAACTCAACCGAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:2d4b322dbd49
|
40 | — | — | — |
|
AAAGTCGTAAAACGCGCAATGATCGCAAGGCGACCTATGC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:d18336a499e0
|
40 | — | — | — |
|
CGCCCGTTCTCCCTCGGTCGTTAAAATGAGTATGGCTGAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:850547a9749f
|
40 | — | — | — |
|
CCATTCTAGCACTTAATGATTGACGTAATTTAACGACCAT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:17c10997e5f5
|
40 | — | — | — |
|
GGATGCGCACGGACAACGCGCGAAATAATAATGTTTTATT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:f360fbe1fa33
|
40 | — | — | — |
|
ACCGAAGACGCGGACACGACAATATTTAGGTCGTAAAAAT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:658fe7916c47
|
40 | — | — | — |
|
ACCGTTACCACCCTACCATTTTTACGAGCATTTCACTCAT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:91a9321fd038
|
40 | — | — | — |
|
GCTGCCCTCACCCCTTGGTTTTACGACCACGCCCGCCCCC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3b151e530581
|
40 | — | — | — |
|
ATGCATTCCTTCCGTGCTTTTACGACCTCCTGCTCCTTTA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3944add89258
|
40 | — | — | — |
|
GGCACCATGTTTTACGACCTGCCCCTTGGTCCGCGTCTCG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3410447a9430
|
40 | — | — | — |
|
CGCCGTCTTCCTATCATCAGGGAACTTTTACGACCACCTC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:89942e1e11d1
|
40 | — | — | — |
|
ATTGCCTGTCCGCAGCATGCCGTGCAGGTTTACGACTTTA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:0811696c88c8
|
40 | — | — | — |
|
ATTAGCACGAGTCGATGACTTCAATTTTACGACTGTCTAA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:2aa51222ce0c
|
40 | — | — | — |
|
CGTTTAATTACTTTTCCCGCATGAGCCATAAATGCCCCAT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:3a96bbd09fb6
|
40 | — | — | — |
|
ACCCAACTTTACGACCTGACTCGGGCCTCGCGACCACCTC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:29c0e6abaf7c
|
40 | — | — | — |
|
CGTAGCGTGTGCCTCGCCCACGGATTTTACGACCGGCGCA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:b213d5daaa00
|
40 | — | — | — |
|
ACTCGCATGATCACCTCACATTTTTACGACTATCCTAGCT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:e845d5f9d201
|
40 | — | — | — |
|
AGCCATTTAACGACCGTCACACCTAACGATCGGCTCCCCC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:60103b5a8708
|
40 | — | — | — |
|
GCTACCTCGCCTCCTAGGTTTTACGACCTTACGGAAGCAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:353d1e3c221d
|
40 | — | — | — |
|
CTCCGTTTTTTACGACCTAGTATACCACTGAATTGCCGCT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:859660211466
|
40 | — | — | — |
|
TTTATTGTGTCACCTTTTTTACGACTTTATAGCGCGCTCA
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:1598ef4b897b
|
40 | — | — | — |
|
ACCCGTAAGCTATTTGTGCGTTTTACGACCGTCACAACCC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:efbfc70d3cbf
|
40 | — | — | — |
|
CCTCACTCGTACCTTGATTTACGACCTTATTCCGGTTCAG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:aae227469abb
|
40 | — | — | — |
|
ACGTAGATGTCGTTAACCTTAGTTTTACGACATATACTTG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:36ef2826273e
|
40 | — | — | — |
|
TCAAGAAGTCCACTCCGTTTTACGACCGAGTGGCACCATG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:de667928657e
|
40 | — | — | — |
|
CCAACTCACCCATGGTCGTAAAAATCCAACCAGGTTACGC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:0ae04deaa2da
|
40 | — | — | — |
|
CAACACCATAACTTTACGACTTCCTCATCATCAACTGCCC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:6e72d2b6ae24
|
40 | — | — | — |
|
CTGCGAAGTCGTAAAATTGGTCTATCGCCATGTTATTTTG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:adb222fa97ff
|
40 | — | — | — |
|
ATGACTGTACTTTACGACTCCAACTTTAATTACCCCATTT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:c8bff5731b82
|
40 | — | — | — |
|
AGACGCTCTCAACGTTTTACGACGTCTCCACGGCGTCCAC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:ae86e918766f
|
40 | — | — | — |
|
CGCAGGTCGTAAAACGTTCCCATGATCAGGGTAACATATC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:1814ffaee23a
|
40 | — | — | — |
|
CTGGCGGTCCTTCATCGTGCAGCCATTAGGTCGTAAAACC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:a6140baf61f6
|
40 | — | — | — |
|
TAGTTTTACGACATTTGTCCCGCTCTTCGCCGCGACCCGT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:13bd4d61566c
|
40 | — | — | — |
|
CGCTCCCAGTGCCAGCGTTTTACGACCACGACCCTAAATC
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:f7898e8d49df
|
40 | — | — | — |
|
CCGTTAATGCTGTATCTTCCTGCTTGCGTACGTCGTAAAT
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:1239cfaaf5a9
|
40 | — | — | — |
|
CTTCATCAACCAACCCGGTTCGAATGGTCGTAAAAAAGAG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:56b0fe738c76
|
40 | — | — | — |
|
GTTCCGCGGCCTCAGCACGCCCCCATTTTACGACCACCTG
PANAPTA:O43248:HOXC11_LMX1B:PRJEB66722:R3:7c91a51c72b3
|
40 | — | — | — |
SELEX rounds
R3 ·final