HOXC11_MEIS3
CAP-SELEX sample HOXC11_MEIS3; Mixture-SELEX sample HOXC11_MEIS3 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ATCTGATTCACACTTAATCGGACCACAGACCGTATGGCGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:747720616797
|
40 | — | — | — |
|
ATAGCTGTAAACCATCGCCTACACCCCTTAAACTTTCTGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:20bc9528a939
|
40 | — | — | — |
|
GTAGACATATTTACTTAACTTAGTTCGACAGTAAATATAT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:997e96c54fda
|
40 | — | — | — |
|
ATGTACTTGGCATACCCGGTTAACACGTTTACCGCCTGGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:28d2fe401849
|
40 | — | — | — |
|
GTATAACTTGGTGGAACGCAGACAGTTATCCCCACGCACG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:384d1327b8f5
|
40 | — | — | — |
|
AGTTTGAACCAAAATAGCACAAAAGTGGTATATTAGTTAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:de4b32b0ae1d
|
40 | — | — | — |
|
CACAGTAATCCCATGAAGTCACGTTCTCACCTTGTAAAAG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:4c7a60c6fb14
|
40 | — | — | — |
|
AAAAACGTGCCACCCGCGCTTCTCAAACTGGAAAAGCGGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:4dcc578f77af
|
40 | — | — | — |
|
AAATAGATTTACTTACTAGAAGATGACAGTGAATCTACTT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:fc94bc6eda15
|
40 | — | — | — |
|
ACACTGCGACAATTTCACACCTGCCTAGCACCCTAGGTGA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:7c6b10c69102
|
40 | — | — | — |
|
ATCCCTCTTGTGACCGTCCGAAGTTGAGAGAACATCGTAG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:2301ba56be2f
|
40 | — | — | — |
|
ACTACACTCGGTTTTGCGTAGCACAGCTGAACCGTAAAAC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:927d65c4c180
|
40 | — | — | — |
|
TCAAGATATATTACTACTGGATTCACGTGAAAAATGGTGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:d14cd99d9cc5
|
40 | — | — | — |
|
CCCTATAGGTGTGAACTTCACGCCTTCTCAAGAAAAATAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:a81c1a7a223a
|
40 | — | — | — |
|
ACTAGTACACACGAATACTCAATTTGTGGCAATTCCCCTT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:1a9149006e92
|
40 | — | — | — |
|
AGTTGACAGCTAAATGATGGATGCTGTCAACCCGTCACTG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:e938bfa647f7
|
40 | — | — | — |
|
CTAACCAGTAGCAGCCTACGCAGGTCGTAAACCTGTCATC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:b33e2dbd994e
|
40 | — | — | — |
|
TATGCCACATGTAATACCGCCGTACAGTGCTGACACCTCG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:96f8f746dc39
|
40 | — | — | — |
|
AATAATGTAATCCACCACATTGCTCGAGAACAGGTGTCGA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:4c184a084594
|
40 | — | — | — |
|
TCCGAGCTTAACTTGGCAAAGCCAAACAGTTAATGAAGAC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:c5466318048b
|
40 | — | — | — |
|
GATCAGGCGTGGCTCGGTAAACGAGAGCGCGAACACAGTT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:d31ae2c320b1
|
40 | — | — | — |
|
CTCTGACCACAAACAGGGATAAGAGATTACACCTCATTCC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:d078df3fa9a7
|
40 | — | — | — |
|
GAACGCGACATTTTTATGAGCTGCCACGACATAAAAAAGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:cae166c00a77
|
40 | — | — | — |
|
CTCTAGGAGTTTGACGTGGGATACAAGTTCGCACGAATAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:49c4dddbc27b
|
40 | — | — | — |
|
GCCCTAGACACGTGTTCCCTCAGGTGAATCGGACCAGCAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:25ca806774c6
|
40 | — | — | — |
|
TGCACCTGACAGCAACTGTCATCCGTGTCCGACCACGTGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:94efafdd9022
|
40 | — | — | — |
|
GAAAATAGCCATAACCACCGGTGTGGACGCAAATTCGCAC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:a514322753cf
|
40 | — | — | — |
|
CAGTTACTTAGTAAAACTGGACAGTAACACGCGCCTCAAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:3b1744e83149
|
40 | — | — | — |
|
AACCGGAAGTACCGAACATAAGTGACACAACCGGAAGCTG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:376d663386fd
|
40 | — | — | — |
|
GCCCTTCACTAACTTGACACGGCAACTCACACCCTGCCGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:aac0830d7cad
|
40 | — | — | — |
|
ATCCTGACTCACCACCTAGAACAGTTGAGCCAGCAGGCGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:b163b3ee1ba1
|
40 | — | — | — |
|
ATGCGAATGGACTTTGACACGTTTGGAGATGCAGGATCGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:c16c0c718dc4
|
40 | — | — | — |
|
TTAACCAGAACGCACGGTCACTAAAAGGCAATAAAAATGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:e50dd29831cd
|
40 | — | — | — |
|
CGATATCGTTACGTGTTAAAAACCCCAGAGGGACCGTAAC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:9112cdcb0036
|
40 | — | — | — |
|
ACCCTGACATTTAACATGTCAACAAACCTGTCACTTATGA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:8b3a289bd2c4
|
40 | — | — | — |
|
GAGTGACAAGCTTGATTGACACCCTGACATTTCTCCGCGC
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:be732f435ba2
|
40 | — | — | — |
|
ATCTGTCATGCCACAAAAAGACAGACACATGTCAATGTCT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:83f0684c0c61
|
40 | — | — | — |
|
AATGAGCTGACAAGCTGTCCAATCTGCATGTCATTCTGAT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:c872a5596383
|
40 | — | — | — |
|
GGTGATACCGGTGCCAGAAATGTCAAGCTGTCAAATCCGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:633cbcb2d583
|
40 | — | — | — |
|
AAATGACAGCTGTCACGTCTTGACAATGAATGGGCTGTTT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:d473da430a3f
|
40 | — | — | — |
|
ACCTTTCCCTAGTACGCGAGAGGTTGCGCACGCCAGGCTG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:66f373e6ac78
|
40 | — | — | — |
|
ACTCGACGATGACAGCTAACGCTGCGGTTAACGATTAGGA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:3b55b759fe69
|
40 | — | — | — |
|
GCTCGTACCCAGAAAAAGATTATGTGAGCAAACACCTTTA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:0b2a825b5770
|
40 | — | — | — |
|
ACGAAAATGACAGATTTACGACGCAAAGGCCGAATTACGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:fe685bce6e8b
|
40 | — | — | — |
|
AAACGTTCAGGTCGTAAAACTGTCAAAACTAATGGCGTAA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:dbd05e132c06
|
40 | — | — | — |
|
AGCTATGACAGCCATTCTGTCAAGCTGACATGACGGCTGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:70c0cd9edf45
|
40 | — | — | — |
|
ACAGCGCGCGGACCTGTAGTAACAGCTTGTCCCCTACCCA
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:b2c62d82cd3b
|
40 | — | — | — |
|
ATACCTGCCACAAGATGACAGGTGACAATCACGATGTCAG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:4c44fce75ee7
|
40 | — | — | — |
|
ACGTCACACCCACATGACACGTTGACAGACCTGTGACGTG
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:b7d5ff60a93f
|
40 | — | — | — |
|
TGTTAATGTCGTTAATCAGGAAATGAAGTCATAAAGCTGT
PANAPTA:O43248:HOXC11_MEIS3:PRJEB66722:R3:970f473dbb45
|
40 | — | — | — |
SELEX rounds
R3 ·final