HOXC11_PAX2
CAP-SELEX sample HOXC11_PAX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGACTCTCTCCGCCCCGTGCGCGCATCCATGCGTGACCAA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:4b53a4192c0b
|
40 | — | — | — |
|
GCTTACGACAGGGTAACTTAAAGGCACCGAACGGGTAGCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:f829c6e8c334
|
40 | — | — | — |
|
TACCTAGTGTACACCCTATTCATAAGAGATCAGAGACGCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:9b4e84d6ac5f
|
40 | — | — | — |
|
TCTACTTCTTACAAGCCAGCGAACCGGAAACCAGACAGCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:b9b41b544fd6
|
40 | — | — | — |
|
TTTACATCATGCAAACCGTCATCCGTCACGCATCGTTGCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:3a962fba3fae
|
40 | — | — | — |
|
CTGCGTTAGACGCCGATGAATGTCGTAAACGTCCACATAA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:ca560fdb359b
|
40 | — | — | — |
|
CTTAGCAGTTAACCCCCGTGAAAGACTGAAATGAGAATAT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:89d270e97643
|
40 | — | — | — |
|
GTGAAGTAATATACATAGGCAGAGGGTCAAACGATCCCAC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:552a40aac14d
|
40 | — | — | — |
|
TGATATTTGCCGGCACGCCCATATCGGACGGCCAGCGGAT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:ad596f3d902b
|
40 | — | — | — |
|
CTCGCACAACCCCTTGCGTCCTCACTTTCACTCCTGAACC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:aadce18abcb5
|
40 | — | — | — |
|
AAGTCTAGCCCTGTAGGTTTATGACGCACCGATACAGTGC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:cd95fb84c059
|
40 | — | — | — |
|
ACATTAAAACCTGCGGTAAACTAAGGCATTATCGATATGT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:09238d32e9fd
|
40 | — | — | — |
|
TTGCTACCACGTACCACCGGGAAAATACGGCATTCCGTTC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:4c3b638eee24
|
40 | — | — | — |
|
AATGTACACCTATCGTTTTACATCGTCACGCACTGACGAT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:1934079a50f4
|
40 | — | — | — |
|
ATTCATGCGTTACGTAATGCCTAATGGCCGCATACCTCCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:14dd7422c9f0
|
40 | — | — | — |
|
GAACTTTGTACAATTCCTCCGGTCACTTAAAGCCACCCCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:87c230a47c55
|
40 | — | — | — |
|
ACTAGCCCATGTCCGAGCTGTAGCGTCATGCATGACTGCG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:c5d3f264320e
|
40 | — | — | — |
|
GTCACGGTTCATTAACTGCACATGTCATGGGCACACCCGA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:699d4fae446c
|
40 | — | — | — |
|
ACGGACCGCTCGCCACGCTTGACTGCACTCCTGACGACCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:4b92640a38d4
|
40 | — | — | — |
|
AGCACAACGACACCATCCTCACACTTCACGGTTCACTGAA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:a1e18f8d1509
|
40 | — | — | — |
|
CGTTAATCTGCATGTTGACGTCACGCTTGGCTAACTACTG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:e3697b57f46f
|
40 | — | — | — |
|
GATAACTGTCATAATGCCTGACCACGTCACGGTTCGGCGA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:6cf02ab0c557
|
40 | — | — | — |
|
ATATTAGTGCAACGTTCGATTGGCACAATTAATTTTTCAG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:1aeef5c29fd0
|
40 | — | — | — |
|
CAAAATTAATGAGCCATTTGTTCATTGAACGCATGACTGC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:784a9d2dab06
|
40 | — | — | — |
|
GGTCATGCACAATCCACGCGTCATTGAGCTTTATTGACCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:9e499fcea34a
|
40 | — | — | — |
|
TGAGTATGTTCACTGAACTGTGACGTCAAGCTTCAGTGAG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:6a999ad2c1c8
|
40 | — | — | — |
|
ATGCCCAGTCAAGCATGAACTCCATTCCATCTGGTTACCT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:75006452c601
|
40 | — | — | — |
|
CGTACGCTGTTATGACACGCTTGAGTGCGCAACGGTCATG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:4dc7cb45ae9c
|
40 | — | — | — |
|
GGTGGTACCATTAAAACCGCTGGATGACACGCTTCATTGC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:de13724eab83
|
40 | — | — | — |
|
AAAACGGTTACATGCCACTCATGGAAGAATCTATCAACGT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:a6df7c7e4e8a
|
40 | — | — | — |
|
GAGACCGTGAGGTAAAAATGTCACACTACATACCAAAGCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:eb8ebe32ced1
|
40 | — | — | — |
|
TGCACCATCATCCGCCCAAGCCGTACATTAACATCAAGAT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:597f79453137
|
40 | — | — | — |
|
ACGTGCGTAATGGAGCGTGACGTATTATTTACCGCCACGA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:ce9f412e8eee
|
40 | — | — | — |
|
AGCGAAAGTACACGTCGTAAACCCGGCCATGCGTAACCAA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:94874722ef3d
|
40 | — | — | — |
|
AGGCCAACCGGTGACGCATAAAGACGTCACGCATCGTTGA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:3770673de0bb
|
40 | — | — | — |
|
TCTGTAAGATCCTCGGGTACGCATATCACCCGACTCACTC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:abccac105c4a
|
40 | — | — | — |
|
ACCTAGTCGAAAACAGCTACAAAACACCATTATCATTGCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:67621ae4edbb
|
40 | — | — | — |
|
ACACGTCATTAATTGCATCCGAAATGACACGCTTGAATGG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:9f5a8df583bb
|
40 | — | — | — |
|
TTAAACCGTAGGCGGCTGCTATGACGCTCTCAACATCCTG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:dc0aca490205
|
40 | — | — | — |
|
TTACCTTCTCATTGCATATGCACTCAAACTTAATCATGCG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:2506dcbb952c
|
40 | — | — | — |
|
TACTCAGCCGTGACTTGAACCTAGTCATGCGTTACGGTAG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:ccb47f5c9fa0
|
40 | — | — | — |
|
AGTATCGCCAATATGGGGGTTAACGGACCGTGACTGTGAG
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:8a7bb5943d25
|
40 | — | — | — |
|
TATGTAGCCTTAGACATCATGAACACGCCAATAAACCAAT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:740f92df4379
|
40 | — | — | — |
|
GTGTTACACCATTGTGGCTTTGCGTCACGGTCCACTGATT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:34c710473d29
|
40 | — | — | — |
|
CATGCATTACATGCATCAATGAGACGATGCGCATCATTAA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:f301e870b040
|
40 | — | — | — |
|
TCCAAGGGACCACAGCTCGCAGACCGCCCTTGCAAATCCT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:848ac046afd7
|
40 | — | — | — |
|
GTCGACTGATTTATACGCACGCCTCCCCTGCCGTGCCACT
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:4437a5dc793b
|
40 | — | — | — |
|
AAACATCGTAAAAGCATCTCATCCGTACAAGCCTAATGCC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:30bf15485d97
|
40 | — | — | — |
|
GAACCCCACAAACGCGCGGTTTCCGTTTCATGAAATGTGC
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:343047f03d62
|
40 | — | — | — |
|
TCGTACTCCATGATGGCCAACTGAGTTACGTCACGCATCA
PANAPTA:O43248:HOXC11_PAX2:PRJEB66722:R3:40d3f8d19fb8
|
40 | — | — | — |
SELEX rounds
R3 ·final