HOXC11_PAX5
CAP-SELEX sample HOXC11_PAX5; Mixture-SELEX sample HOXC11_PAX5 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTACTGTACTGCGATACAGCTTAGTTTCAGTACCCGACTC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:68dbcfd348aa
|
40 | — | — | — |
|
ACTTATTACAAGATATGCTTGTTTGTGCTTTCGTATCATT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:dd394bdad0f7
|
40 | — | — | — |
|
TTATGATGTTAAACTTTGTTATATTGAATGCACCTCCCGG
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:523d09f94b9f
|
40 | — | — | — |
|
ACATAAAAGTCCATGAACCGTGACGCCGTTTCGCGCGAAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:39f685c9295e
|
40 | — | — | — |
|
GCCGGTGACCATGATTACTCGCCATTCGCCACGCCTGAAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:bb71b72f2428
|
40 | — | — | — |
|
ACTGCATGGTCGTAAATTCAGTCTAGCGTGACTTGTTGGC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:f3ff47b3adfb
|
40 | — | — | — |
|
GCGCGAATGAGTGATCACGTTCCGCTTCGTTGCCTTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:6d2847a0d516
|
40 | — | — | — |
|
CATGCATAACGAGTACGTCTCACGGTTGAGCACCCATTAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:f49378aa4dba
|
40 | — | — | — |
|
GATTTATGACGCGTGACGAACACAACGTACACGGATCCTC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:f5d85b96b6af
|
40 | — | — | — |
|
GTTAATGATGCGTAACGAGCCGTGACAGGCACGCATCGTA
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:34c898f99de1
|
40 | — | — | — |
|
ATGTCATAAAGTGCGATCAAGCGTCGCAACGTCCAAGCAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:01b579ed2254
|
40 | — | — | — |
|
CTCGCCTCACGCACCCACGCTACGCACCAGTGGGTTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:612ab3c4da00
|
40 | — | — | — |
|
TCAGGCAAGATAGCCATCGTTACGCATCGACGCCTTTAAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:5363af978244
|
40 | — | — | — |
|
GCGCTCGCCACCCTACGTTCCGTCACGGGTCATTAATTTC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:8e01e2813aa5
|
40 | — | — | — |
|
CCTGTGCGTCTATCGTAAAATCGCTCATGCATGGCTGCTT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:a367c0506c42
|
40 | — | — | — |
|
CGACGCTCATAAAAGCTACTCATCCGTAAACCTCGCGTTG
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:a653c8eeb509
|
40 | — | — | — |
|
TGTCAACGCTTCGATAATCTGCACGCATCAGTGGTTTTAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:298ea6d0764b
|
40 | — | — | — |
|
TCCGCATGGTTACGTTTTACGATGACTACACGCCATTATA
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:af4f6afd02ca
|
40 | — | — | — |
|
CGCCCATAAAACACATCGAAGCGTGACGGATTGCCAACTC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:4c47fee4da98
|
40 | — | — | — |
|
GCATCATTTGCTTGTGCTCACCGTAGCGTAACTAATGACT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:a05ae0df9f98
|
40 | — | — | — |
|
AACTCCGACCCACCATCGCTTACGCTTGAGTGCACTTTAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:3128b16635b8
|
40 | — | — | — |
|
CATGCACCGATAACTTTTATGACATCTTAACCGCACAGAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:5aa62127d3e5
|
40 | — | — | — |
|
CACGCTGTACCCTCTGCAATGGTTGAGCAGTTTTACGATC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:7123d1681a7c
|
40 | — | — | — |
|
ACGCTACCAACGCCAAAGCTATTAAAACCACTCAACCGTG
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:ba280a18f3ac
|
40 | — | — | — |
|
GAACATATGTGGAGCTTGCGATATGCATCGTTGGTTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:2f6ec33bf312
|
40 | — | — | — |
|
CTTCACCATAAAATCCAATCAACCGTGAATATTGCGTCGG
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:cee909c49776
|
40 | — | — | — |
|
ACACGCATTGCATCGTCACGCAACGCCTCACCGATTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:f8fc8d0fa07e
|
40 | — | — | — |
|
AGTGGTCACGCACCATTCGTTTTACGATCTGCTCTTCTGC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:250900d9946c
|
40 | — | — | — |
|
ACACGCGTCACACATCGTTAATCTTTATGGTATCTGGCGC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:8b4e94589c7b
|
40 | — | — | — |
|
TACGCTTCGGTTGTTTTATGGGTCTCTACACCATGCGATC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:222a4494e137
|
40 | — | — | — |
|
TGCGTCATGCCTCATTAACCCCAGACTCTGCTCGCATTAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:3bf245588ce2
|
40 | — | — | — |
|
ACAAGTGCCCTATCTAACTTCACGCATCGACGCGTTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:514ff0bf5851
|
40 | — | — | — |
|
GGGCATGCATGAATAAACAGCTACGGATAGTGCGTTTAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:f82feefec1cc
|
40 | — | — | — |
|
TACACATGAAACGCAACCAAGCGCATCGATGCATGTCCAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:d5cdd689acc0
|
40 | — | — | — |
|
CCTCAAGTTGTATACCATGCTTCATTAGGTTTAACGATGG
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:3019c4a09564
|
40 | — | — | — |
|
CACACAACAATAACTTTTACGACTCAACGAATGCGTCCGC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:2565cd9eaf33
|
40 | — | — | — |
|
GGCCACGGCACTATGACGGAGGGTTAATGACGCGTGAAAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:c39eb62d071d
|
40 | — | — | — |
|
CGCCGCACGTCTACCCGTCATGCGCCAACAGTTTTACGAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:abcc3275b128
|
40 | — | — | — |
|
GTAGCTATCATAAAGCGCAGTCAAGCGTCACATTCATTCT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:6ea9e4114803
|
40 | — | — | — |
|
CGTAAAACCAATCACCCGTGTCTTCCCGTGCATAACACAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:589ec9fc03e7
|
40 | — | — | — |
|
TCCCCCCAACGACTACTCGATGCGCATGACTAGTCTTTAC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:9399fd57bf74
|
40 | — | — | — |
|
GTCATGGTTGATTAATTACCACGCAAGCGTAACGCTGTGC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:b47f6b990097
|
40 | — | — | — |
|
AACGACCCAGCACGCTTGACCGATCATGTGAGACCAAGGT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:2f1633613444
|
40 | — | — | — |
|
GGGCAAGCAACTGTGACGTGACTATCGAGGCGTAGCGAAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:c5ee203a7409
|
40 | — | — | — |
|
CGTTCCCATGTTACCGCTTGACCGATTTTTACGACATTCC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:86281f3e2502
|
40 | — | — | — |
|
GCCACCTCGACCATGTGTGTTCCGCTTCACTGCTATTTAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:6f759535b6ae
|
40 | — | — | — |
|
TACGCAGCTCCCCTTCGGTGTCACGGTTCAAGAGTTTTAT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:336d30b4b0cc
|
40 | — | — | — |
|
TACGCTCCAGTGCATTTAACGACTCAGTGCCAAGCTGATC
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:e544b1b9c1fb
|
40 | — | — | — |
|
GTCCCCTTCCACGCATGAACGGGCTTTACGACTTCCAACT
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:65bac5e42d3a
|
40 | — | — | — |
|
AATGAGCTGTTGCACGCTTGACTGGTTTTATGTGTGTTCA
PANAPTA:O43248:HOXC11_PAX5:PRJEB66722:R3:47bbb333f2e3
|
40 | — | — | — |
SELEX rounds
R3 ·final