HOXC11_SOX11
CAP-SELEX sample HOXC11_SOX11; Mixture-SELEX sample HOXC11_SOX11 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTTACGACCATATGCCATTGTTCAAGTGAGACAATAGCAT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:ec722394f8d4
|
40 | — | — | — |
|
ATCTTTGTGTCGAACGTTAAACAAAGGACGATCATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:c80f384ff738
|
40 | — | — | — |
|
GTCCATTGTGCTGCATTGTTCCACCGCCATTCACTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:d44b7d1b1deb
|
40 | — | — | — |
|
AACGAACAATGCCCATATACGCTAATTGTCCGTGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:a9fa77d12677
|
40 | — | — | — |
|
GATCGGCCAGCCTATTTTACGACCCTTTGTCTGTCTTTGT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:ff8911d76403
|
40 | — | — | — |
|
TATGCCTACCCTTTGTTGCAAAGACAAAAGGAGGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:0372d77d27bf
|
40 | — | — | — |
|
GCCATTGTCATGCTGGGACAATGCCATTTACGACTTTCCT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:60140ddb482b
|
40 | — | — | — |
|
TATATGCATGACAATGCATTTTTACGATCCTTTGTGAACA
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:c37753b299fd
|
40 | — | — | — |
|
GCATCACTGCATAAACAATGCTACTATTGTTCCAGTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:ca638ac142a6
|
40 | — | — | — |
|
TCGCAGACGAGCACACTATCTTCCCTTTGTTCTGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:4d60726cb76e
|
40 | — | — | — |
|
GTGCGGTTAACAATGCGTTTTACGATATTCCATTGTTTCG
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:35c32d523269
|
40 | — | — | — |
|
TTCCACTTGAACAATAGACACTTTTTACGACCTAATACTT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:91b69467f214
|
40 | — | — | — |
|
TCTACTTAAACAATGAGATTTTACGACATCTCCATCCCTA
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:b7463646c4e4
|
40 | — | — | — |
|
TAGCCACAACACAACGGGCTATTGTTGGTCCCACTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:144d7df5d09b
|
40 | — | — | — |
|
TGGGAGCCATGTATTGTGTGAAGTTAAACAAAGGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:ebcad5666b3a
|
40 | — | — | — |
|
CCACGGCGCGAACAATGCCATTGTTGTCTTTTATGACGCC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:24c85a2e4d70
|
40 | — | — | — |
|
ACACACAGGATAACAATGGGACATCACAAAGAAATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:aa41f3425054
|
40 | — | — | — |
|
GTGACACAAAGGACACGATGCAGAACAAAGCGTAGTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:773d7a1ffdb6
|
40 | — | — | — |
|
CGTCGAATCTATTGTGTCCTAGCATTGTCTCGTTTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:e811d4ffe3b2
|
40 | — | — | — |
|
GTGACAGTTAAACAATGCACGCATTGTTGCCGAAATTAAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:5f8b3203cdcc
|
40 | — | — | — |
|
TTGTCAAGAACAATGTGGTCGTAAAATTTCGCTTCGTATC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:b1914ab0ac53
|
40 | — | — | — |
|
CGCGCTCTTTGTTCGGAACAATGCCCAGCCTGCGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:e08f4de6a6e0
|
40 | — | — | — |
|
TGATGCGAACAATGAGGTGACGCATTTCGCGCTGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:7dfe5e81e2b2
|
40 | — | — | — |
|
AACCACCCATTGTCCTCGTCCGTTGTTTATTGCATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:932883c124dd
|
40 | — | — | — |
|
TCGTTTTATTACCCTTCTTTGTTCCTCACGCGTCTGTAAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:dccce8004154
|
40 | — | — | — |
|
TGTGAGAGTCGTAAACTTGCTGTATTGTCCATTCTTTGTT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:74dca2dfe471
|
40 | — | — | — |
|
AAGCATTGTACTCACTTGAACAAAGACGCTTCATTTTAAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:6fcf4749b87e
|
40 | — | — | — |
|
TCTCTTTGTTCCTGAAAGTGCTGGATGTGGCATGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:53064e15202c
|
40 | — | — | — |
|
CAGGCAAACAAAGGTGATACTGGAACAAAGGGCATTTAAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:889078f34f93
|
40 | — | — | — |
|
TCAGGGTTGCCTTTGTTTACGAACAGCAGGTCATTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:68fb85f2bc58
|
40 | — | — | — |
|
GCCTGATGACAATGGCGTTTTTTACGATCGTTGCCGACGC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:85d660d7e92f
|
40 | — | — | — |
|
TGTAGTTTACGAACAACGTAATAACACAATGCTTTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:b66ecb30b298
|
40 | — | — | — |
|
CTTAGTCGAACAAAGACATGGGAAGTCGTAAAAACCGTGA
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:20a76f694519
|
40 | — | — | — |
|
AGTTGCCCCTAAACAATATGCCCATTGTTTGGATGTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:53bd1e6b99f6
|
40 | — | — | — |
|
GTCGTTGTGTAGCATGCATTGTCCTTAGGGTCCGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:5163e5874dda
|
40 | — | — | — |
|
GCTTGTACCGAACAATGCACGAATCTCGCCTTTGTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:9b19ef1f3d32
|
40 | — | — | — |
|
AAACAATGCTGATTAATTGCCTATTGTGCGACGAATTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:66a3b8fac227
|
40 | — | — | — |
|
AATCAAACAAAGGAACGCGCTTTTACGACCTTTTGTCGAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:4f4d901c2b2c
|
40 | — | — | — |
|
TCACACTCTATTGTCTACTCGACAAAGAATCCCATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:80380e879c3f
|
40 | — | — | — |
|
CCGCTTAACGACTTTCCATAACAATGACTATTGTTAACAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:ec60ac99ec9f
|
40 | — | — | — |
|
TGTAAGGGTACATTGTTGGTTTTAACGACTCATTGTGTGT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:024cbf9cb392
|
40 | — | — | — |
|
ATCGCACAAAGACAACAAAGGTACTTTCGCGTTAATTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:344f61ece9c8
|
40 | — | — | — |
|
TTTTACGATGCCCATTGTGTTTCTGCTTTCTATTGTTTGC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:a98b0a3b9ec5
|
40 | — | — | — |
|
CCATTGTGCTCCAGCCAACAAAGAAACAAATTTACGACCA
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:223892708908
|
40 | — | — | — |
|
TGGACAAAGGTTGACGCGTTCTTTGTGCCTTCGAATTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:d68fdb67c2d8
|
40 | — | — | — |
|
TCATAATCATTGTTGTCATTGTTGCGATTACTAATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:fa60fbfa8384
|
40 | — | — | — |
|
TTGAAATGTGTACCAACAATAACTAACAATGGTATTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:59412d5afc42
|
40 | — | — | — |
|
ATCATGCTTGACGCTATTGTTGTGACAATACCATTTTTAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:8380d98814e8
|
40 | — | — | — |
|
ACGTCTGGACAAAGAGCTTTTTACGACTTGTGCCTAGCAT
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:e06e5da85fc4
|
40 | — | — | — |
|
ATCAGCTTATTCACAACAATGAAAACAAAGAGAGTTTAAC
PANAPTA:O43248:HOXC11_SOX11:PRJEB66722:R3:b7b971ed1b77
|
40 | — | — | — |
SELEX rounds
R3 ·final