HOXC11_TBX20
CAP-SELEX sample HOXC11_TBX20; Mixture-SELEX sample HOXC11_TBX20 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GTGATGCTGCATCCCTACCTTAACGGTACATATTGTGTTT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:2310bdfdd2f1
|
40 | — | — | — |
|
TGATTGTTTTGCCTCGATTTTTAGGTGCTACACGTATTCC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:064f07bc36a6
|
40 | — | — | — |
|
CACCGACACTGCTACGGCCTCACACGTCGTTATCACCTCT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:5ecf6e43a70e
|
40 | — | — | — |
|
GAATTGATAACGATACGTGTTAACGATGTGTTATATAACA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:e8fe2f0ecfb7
|
40 | — | — | — |
|
CCTTCGCACCGCGCTTCGCACATCATAAACACCTTACCAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:f2ddff5062d9
|
40 | — | — | — |
|
GTGTTAACTTTGGCGTGGGAACGTGTTTACGATCTGTGAA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:d90b8f637c80
|
40 | — | — | — |
|
TAACTCGTCATCGTATCGCGTCATGCCACTTAATGTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:aabb220a07f9
|
40 | — | — | — |
|
CACCCTTACACGTCGTAAACACATTCCCCAGTCATTCCAA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:45dd57338389
|
40 | — | — | — |
|
TCACGCCGCTTTTTACAGCATCGCGCTTTTAACGACCTGT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:d2fb3dbad8db
|
40 | — | — | — |
|
CACACCTTCGCTAACACATCGTAAACACGATGCTCTAGGC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:e673b0d65bc0
|
40 | — | — | — |
|
TCACGCGTGTTGCGTGTTAATCACGCTATTTACGACCTGT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:bd5f03cd5296
|
40 | — | — | — |
|
ACGACAACGTCACACCTAATTAACACCTCATGGCGGGGAG
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:6b9152c3fe38
|
40 | — | — | — |
|
GTGACATGCAATGACACCTCCCATGTGTTAGCGCGTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:fefc3a761423
|
40 | — | — | — |
|
GCCACACTGTGACACCTCACTAGATCGTTAACACCTTAAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:914f5b6b9e7f
|
40 | — | — | — |
|
CACGCGTCAATACTTAAAAGTGGCAGATCGTAAACACCTA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:9d4e604fe58f
|
40 | — | — | — |
|
TGACACGTCGTAAATTTTGGCGCAGTGTTACGACAGGTTA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:f42211ee3084
|
40 | — | — | — |
|
TATGTTGAAACGTGTTTACGATGTGTGATCTGTCGCATTA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:4cefb171b00d
|
40 | — | — | — |
|
GATATGGTGTTAATGGTCTACTTCACGGCAATGCGTTAAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:267dcc03fea7
|
40 | — | — | — |
|
AACAGGTCGTAAACAACCGTTTTTACGTTGTGAACCTGTT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:7fd753701b37
|
40 | — | — | — |
|
ATAGGTGACAAAAGTAGGTGTTTACGACGTGATAAGCAAA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:cb4f879bdc92
|
40 | — | — | — |
|
TATGTCGTTAACAGCTGATAGACGTTGTTACAGTGTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:c8745d44081a
|
40 | — | — | — |
|
AACACCCCATAAACACGTCATAATCGTAATTAAGGTGTCT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:93da722f57e5
|
40 | — | — | — |
|
CACTATAACGCGCCGACACGTCGTTAATAACGGTCTCGCG
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:5b430769113a
|
40 | — | — | — |
|
TGCTAGGTCGTAAGGTAACACCATTTAACGACCTGATGTA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:92c51504b575
|
40 | — | — | — |
|
CAACGCGTTACGTTAACGGACGCTGTGTTAACGTGTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:43a9e799e6ed
|
40 | — | — | — |
|
CGCTGTCACACCGGTTTTAATGCTTATGACACCATTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:c9fe78c2882b
|
40 | — | — | — |
|
CATGACGCCCAACTCAACACCGTGACACCCACTATTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:1457975d9ad6
|
40 | — | — | — |
|
CGCACCGTTACACCCGTAAGCCGCACTTAACCGATTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:8b6eca6c992a
|
40 | — | — | — |
|
CAACTTCACACCCCTTCTCATCACAAGAGCCACATTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:ca3698155120
|
40 | — | — | — |
|
GATTCTCGTACATCGTAAACACGTATCCCTATTTGTCGCA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:04789d1b16ab
|
40 | — | — | — |
|
ATGCTATGTAACACCTCATTAACACGTTATTGCCACTCAA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:931df531665a
|
40 | — | — | — |
|
GATCGCCAGGCGTTACCGCGTTATTTACGATGTGCTGAAT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:e2d0b735aeea
|
40 | — | — | — |
|
GGTTGGTCGTAAAAATTCGTCACGCTCTGACGCACTGACG
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:00883523e569
|
40 | — | — | — |
|
TTCACGCATCGACACCGTACGCGCGATTTTACGACGTGGC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:e2a43ee8cf98
|
40 | — | — | — |
|
CACTTTCACTCCCCCACCTTTAAGTAGCACGTCGTAAACA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:dd7deb811ea2
|
40 | — | — | — |
|
TAAACTTGCGGTGCCACGTTGTTAACGTGTAGCATTTAAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:b45969c49399
|
40 | — | — | — |
|
TAACGACCTGTATTATGGTGCCATGTTGTCATAAAGCAGT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:756414ace6f7
|
40 | — | — | — |
|
TTTACGATGTGTAAGCGTGATTGGTTTTAACTGTTAAAGT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:d2e2c7388b9e
|
40 | — | — | — |
|
CTCGTTTACGACCTGTCATAAATTGGCGCGGTGACACTGC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:321575da8d94
|
40 | — | — | — |
|
TTGTAACACCCCATTAACACTACTTCTGCTGTTAGACTGA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:ed791af8a463
|
40 | — | — | — |
|
TAATGATGTGTTAACGAACTGTCACACCTCCTCACATACA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:523208041b46
|
40 | — | — | — |
|
TTAGGTGTGTCACACACGAACTTTAACGACTTGACAGCCT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:2995a3ec4907
|
40 | — | — | — |
|
GAAGTGGCGCCATTGTGTCATTTCACACCTAGCATTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:aed8e2b49382
|
40 | — | — | — |
|
TGCCACCTGGAACTGTTATTGCGCGGTCACGCTTTTTAAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:324687a6c7f9
|
40 | — | — | — |
|
GAAGGAGACCCGATAGATCGTTAAGGTGTTTATGAGGTGC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:5af9cbe466f4
|
40 | — | — | — |
|
GCTACAGTGTCACCGTAACACGATCAGTTTACGACTTGAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:6497551f6356
|
40 | — | — | — |
|
TCGTCGCGTTATCGCTTTGTTTATAACACCTCAAGTTTAC
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:ec6b9c333c4b
|
40 | — | — | — |
|
GTGTTTTACGACCTGGAGAATAGGCGTGAAAGTGTGGAGT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:01730e3f21f9
|
40 | — | — | — |
|
CGCGCACTTGTAAGCCGATTTTCCCACATCGTTATCACCA
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:3b65afd1e57a
|
40 | — | — | — |
|
CTCACATTACGGAACGCTACTTTACGCCTCGTAAACACCT
PANAPTA:O43248:HOXC11_TBX20:PRJEB66722:R3:a0f826a612dc
|
40 | — | — | — |
SELEX rounds
R3 ·final