HOXC11_TBX21
CAP-SELEX sample HOXC11_TBX21; Mixture-SELEX sample HOXC11_TBX21 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACACCTCAACTGTCCGTTTCACACGTCGTAAACCTCGCAT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:b397fcd913a4
|
40 | — | — | — |
|
CCTGCGATTTACGACCTAACACCTTACGCCTGCATTTCGA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:41eeef831d2c
|
40 | — | — | — |
|
CGCCTCCCGTTTACGAGGTGCGAAACCGTTTCGCACCTCC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0476c3962673
|
40 | — | — | — |
|
CCCTTTGTTTACGACTTCACACGTTCCGCGCCACGCTTCA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:2803353cf26d
|
40 | — | — | — |
|
CCATCCCTCCCACGTTCACACCTCGTAAATCGCGCGCTAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:096e86f64eca
|
40 | — | — | — |
|
CCTTGGTACCGCATTTTCGCACGTCGTTAACCATGTTGAA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:00d800377e50
|
40 | — | — | — |
|
CCTCGTTAACACGTCTTAACACCTCACCGTTCTTCCACTT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:b33de2733587
|
40 | — | — | — |
|
CCCCCTCCAACTTGTTAACGACATTCACACCTCGTCAGAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:7e7658abb1e6
|
40 | — | — | — |
|
CCTAGCCCCATTGATGTCACACCTCCCATTAACGACCTCT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:5a015c83dcd0
|
40 | — | — | — |
|
CGCTAGTATGGCACCTTGCTTTAACGACCTGACACCTTGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:09e6427f585e
|
40 | — | — | — |
|
CCTTCCCTTTACGACCTAACACCCTCTCATGCACCATGTG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:963e6974d84f
|
40 | — | — | — |
|
CCCCACACGCCTGCATTTACGACTTCACACCTTTCATAGC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:5ae84ea0669b
|
40 | — | — | — |
|
CCTCCGACCCTTCGCATCACACCTCGTAAATCGCCACTCC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:dc12447857f2
|
40 | — | — | — |
|
CCTTTACGTTACTGCTTAACACCCTTTTACGACCTACCAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:2cd1f66b977f
|
40 | — | — | — |
|
GGCTTTCCCACCTTTTTTTTACGACTTCACACTTCCTGTG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0068bec7be11
|
40 | — | — | — |
|
CCTCTCTCCAACACCTACGTCCTATTCACACGTCGTAAAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:09d6cfb3811e
|
40 | — | — | — |
|
CCTTTCTTGCCGATGTCTCACATCGTAAATCTACCTCCAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:4705fe78866b
|
40 | — | — | — |
|
ATCACATTTCACAGATCGTAAACATGCGGTCACACCTCAG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:bbbf4c77c8e0
|
40 | — | — | — |
|
CCTCGTTAAATCCTCAGTACTTTTCGCACCTTGTTACGGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:e0e6bd029747
|
40 | — | — | — |
|
CCTACTCTCACCACCTGACACCTCGTAAAACCTGCCACCA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:9b40462775e4
|
40 | — | — | — |
|
CCTCTTTTACGACGTAACACCTCCGGCCACTACCGTCGCT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:88281c55feda
|
40 | — | — | — |
|
CCTCGTAAAGTGTGCCGACACCTCTACACCTACACACCTG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:5efb010feee2
|
40 | — | — | — |
|
CCTACATTAACGACCTTACACCTATTTGCTCCTGCCACAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:6843e25b5820
|
40 | — | — | — |
|
CCTCGTTAAAGTACATGACACCTTCCATTATGTATGTGAA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0bcc9451db3c
|
40 | — | — | — |
|
CCTTATTTACGACGTGTCACATTACGCATGCCACGTGCCG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:4fcacaa32562
|
40 | — | — | — |
|
CATCGTAAAACGATGTCGCACCCTTACATAACACCTGTGC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:7baee4df0c4c
|
40 | — | — | — |
|
CCTTCGAATCAATTGTCGCACCTCGTAAACCTTCCGAGTA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:2be2233db231
|
40 | — | — | — |
|
CCTACTAACGCACTTCGACACCTCGTAAATCCGCGGCCGC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:4952ed0b1c28
|
40 | — | — | — |
|
CCTTTGACCCACTATGATTTACGACATCACACGTCCGCTA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:da878ed0d6a1
|
40 | — | — | — |
|
CACGATGTGTTAATTACTTTCGCACCTTGCGTCGGATTGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:35e248e7aeaa
|
40 | — | — | — |
|
CCTCATTAAACAATTCACACCTCACGCTATATCGACTAGC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:282d55822431
|
40 | — | — | — |
|
CCTTTTACGACTTTCACACCTCACCATCCTCACCCTTTCC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:72bd64a97f8c
|
40 | — | — | — |
|
CCTCCACCTAATCTAGATTTACGACATGACACCTTGATCT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:f894f57f1dea
|
40 | — | — | — |
|
CCTCTCAACGCGATTAGCACCTCGTAAATGCACTGAACGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:988a39258aa4
|
40 | — | — | — |
|
CCTTCTTTTACAACTTCTCACCTCTTGCGCCCTCAGCCAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0e7e34d61254
|
40 | — | — | — |
|
CCTTATTTACGACTTCACACATAACCGCTCTCGCACTTCG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:2c50954d5e57
|
40 | — | — | — |
|
ACCTCGCGCCTCGTAAACGATGCTAACACCTCTATTTCAC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:d299ccbd45d2
|
40 | — | — | — |
|
CCTCGTAAACGCGTGACGCAACGGTTCACACCTAGGACTC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:fc462b475fe6
|
40 | — | — | — |
|
ACATTTGACACCTCGTTAACCCGTAATCACACCTACCTTA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0bf47fd545ad
|
40 | — | — | — |
|
CCTCTTGTCCCCCCCGTTCACACATCGTAAAATTCGCGAT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:19d2433485ca
|
40 | — | — | — |
|
CTGCAGGATCACGACGTGCGAAAAGTCATTAACACCTATC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:f93448fc3149
|
40 | — | — | — |
|
GCCCAACGTTTTCGCACCTCGTTATTATTTTCACGCCTGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:7ecfdd948f1f
|
40 | — | — | — |
|
CCTCGCCTTCCGCTCAGTTTAACGACCTAACACCTTCAGG
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:fda8131f3c4d
|
40 | — | — | — |
|
CCCTACTTAACGACTTCGCACCTTTGTCTCACCCCGTCGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:f45de0ad18bf
|
40 | — | — | — |
|
CCCTGGACTACGAAAGCATCGCCATTCACACCTCGTAAAA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:ee3bb9827a16
|
40 | — | — | — |
|
ATGACCACATCTTTCGCACCTCGTAAACACCTTTCACCCT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:27544673a995
|
40 | — | — | — |
|
CCTCGTAAACGAGTCAGCGCATACTCTAACACCTCGCCCT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:0354d8c0bd27
|
40 | — | — | — |
|
CCTATTGCCTCACTTTTTACGATTGTCTCACCTTTTTGGT
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:e404cac868b3
|
40 | — | — | — |
|
CCTAATGCTACGTCTTTCACACGTTTTTAACGACTTTTGA
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:a46bff2b3e94
|
40 | — | — | — |
|
CCTACTTTTATTACATCACACCTACCTACCCTCACGTATC
PANAPTA:O43248:HOXC11_TBX21:PRJEB66722:R3:a6a2083617bb
|
40 | — | — | — |
SELEX rounds
R3 ·final