HOXC11_TBX4
CAP-SELEX sample HOXC11_TBX4; Mixture-SELEX sample HOXC11_TBX4 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
ACCCGACACCTCTTCCCCCGCACGCGTAAAGCTCCGTCAA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:6413aa4fb901
|
40 | — | — | — |
|
GCATGTCAAACGCCCACACCCGCCTATATCACCTATCCGG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:15d7c424a323
|
40 | — | — | — |
|
CACGAGCCCATCCAAACCATCACACCAACCTCCATGTGTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:f73a1c8c3217
|
40 | — | — | — |
|
ATATCGGTTGACGCTTCACTCACTCGGCGCCTCTCCCGTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:7ce6780fbcbd
|
40 | — | — | — |
|
GCACCGGCCCACACCTTCCCCACGCAATTAAGGTCACAGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:56d7012db447
|
40 | — | — | — |
|
ACCTCCTCCGACAGCTGAACCCTCGGCTCAAGGCACCCCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:8e1ea83d773c
|
40 | — | — | — |
|
ACGAACACCTATTCACACGTCACCTCATAAAACACGCTAC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:e952041b8d67
|
40 | — | — | — |
|
GGAACCCTTTTTCACAGCCGCTTCGATACCTCACACCTGG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:92c92b8f2973
|
40 | — | — | — |
|
CTGTACAGCACCTCGCACTCCCATACCCGTCGAGTATTCC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:e7f5ed09908d
|
40 | — | — | — |
|
CGACAGTTTTAGCACTTTACCCGCCTTGTATATATTGCGC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:cd53b9074fd7
|
40 | — | — | — |
|
TACCATATTAACTGCTAGACGATACACCCTCATACACGAC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:3d450b9cbf2a
|
40 | — | — | — |
|
TTTCACACGTCACCTCGTAAATTACGACATGCACCCTCTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:02fb85d6777f
|
40 | — | — | — |
|
CCTCCCATGCACCACATCGTAAACTTTCTCACACCTACGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:fd25956d53f2
|
40 | — | — | — |
|
TCCACCTATCCCCTCATGTCACCCCGGCAGTTACCCGCCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:05f64454ddbf
|
40 | — | — | — |
|
CCCAGACATACGTAACGCGACACCTTACATTTTACGATGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:c41de2cdec20
|
40 | — | — | — |
|
ACCTCTATCACAGTCCACGCCTCCCCCCGGAACCCGCGCG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:6fadd184c74c
|
40 | — | — | — |
|
GGTCACACGTCACCTTCGCTCCCCACACCTATAGTGAGGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:00ba7ef32d4d
|
40 | — | — | — |
|
CTTACGATTTACGACCTGTCAACTCCGTCACCTACCATAG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:5244621d1732
|
40 | — | — | — |
|
ACGCTAGCTGACACCTCACCTCCCACCTAACACTTCACCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:c6df1c4efbc9
|
40 | — | — | — |
|
CCTCGTAAAAAGGTGCTAAGCTACCACCAACGCCACCCTG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:fc232c628d74
|
40 | — | — | — |
|
TGCTCATCAGCGCGCCCTCCGGCACGCCTATGCCTCGAAC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:eed9c6c0f7a5
|
40 | — | — | — |
|
CGTCACCTCGTAAAAATCACCTAATCCAAACTCACACCTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:3fd17d86ce2a
|
40 | — | — | — |
|
CGTATAACACCTCACCTTCCGCGACGCGTCACATCACCCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:9c2d8848c909
|
40 | — | — | — |
|
CCCCTACCAGGTCACAACCCCTGTCCCTCCGCCACACCCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:40a149915734
|
40 | — | — | — |
|
CAGCCCCCTCCCACGCAAGAATTCGCCCGTCCTCAGTCAC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:321e6039a760
|
40 | — | — | — |
|
CGTCACCTCCGAGGCAACACCTATGCCTCGTAAATGCAGG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:8d2053beb932
|
40 | — | — | — |
|
ACCGTTGCATCGCCCTCCTCTCTTTGTCTACTCAACCCCC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:4898f514af38
|
40 | — | — | — |
|
CAACCCTGTCGCACACTTCTCTACGCTAAAGGCTAGCCCC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:b747a12be031
|
40 | — | — | — |
|
CCTTTTCCTCCCCTCACCCCCCCACGCCCGCGCGCCGCTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:e955257694c0
|
40 | — | — | — |
|
CCAACTGTTTACGATGTGCGAATAGATATCACACCTTCCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:971005cdf2ce
|
40 | — | — | — |
|
AGCAGAACCGTCATCACACACACCACGAGCCTGACGACAG
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:a429e218ffd2
|
40 | — | — | — |
|
CCCGAGTACTTACACAAGCTTGCACACACCATACACCTGA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:3c1082c5a3c5
|
40 | — | — | — |
|
CCTAACACCTTCCAGCGATCGTTAACACCTTGTATTTAAC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:1618e0539eea
|
40 | — | — | — |
|
ACTCGAGTGACGTGTTATTCTTCACACCTCACTCACTGGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:c7f7efdf0bfb
|
40 | — | — | — |
|
TCCACGCTCCAGCACCCACTACCTTCACAGTACTATCCCC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:6cedd63c55da
|
40 | — | — | — |
|
AGGTGACGTGGCACATCCAACACCTAGACACGCGCCGTTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:f5b65a43bc86
|
40 | — | — | — |
|
CCTATTTACGAGGTGTCACTGTGTTCCGCCCCCTTCTGGC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:77ff2840e9d0
|
40 | — | — | — |
|
CTAACCCCTTTGTTTTCCCAAGATTTAGCACCATGTACCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:a96d933e6326
|
40 | — | — | — |
|
TATCTAACACCTCACCTTAGGTGATATAGCACTTATTCTA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:e34af7e994c5
|
40 | — | — | — |
|
CCGACACCTCACCTCGCTTACACTTTTACGACGCCTCCCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:378e48230d32
|
40 | — | — | — |
|
CCTCGCCCCCGCAGCACCCCTGTCTCGCCCCCGCTCATCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:9a99fa6d8089
|
40 | — | — | — |
|
TCTAATGTGACCTCATAAACCTAACACCTCACCTGTAGGT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:535511a9031d
|
40 | — | — | — |
|
GCGCTACTCTTCGTTGGTCATACGAAACCACACCATCTAA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:5e15f72fd9d2
|
40 | — | — | — |
|
AGCACGCACTTGAAGGATGGCTGAGCCCCACATGAACTTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:e1c448ab1974
|
40 | — | — | — |
|
CCTCACCTTTTTTACGACCTTACGTGGCCGTTGTTGCCCA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:8129dd01a44d
|
40 | — | — | — |
|
GCACCGCTTAGGAAGTTGCCATATATTCGATGGCTCCTCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:89dccad00a6c
|
40 | — | — | — |
|
GACACGATCCGTAGTTCGCACACGTTCTGTACCCTCGCTC
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:b4dc91cd5264
|
40 | — | — | — |
|
CCTCACTATCCCTGGAAGTGACACCTTTTTACGACCCTTA
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:d7dd89024f95
|
40 | — | — | — |
|
CTGTTACTTCTTAACGCTTTGGCTCTCGTACGCCCGTCCT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:7e50957acfb5
|
40 | — | — | — |
|
CATCGTGAAGGGGTGTGAGAATGACACGTCACCTTTAAAT
PANAPTA:O43248:HOXC11_TBX4:PRJEB66722:R3:5011ee0f9f61
|
40 | — | — | — |
SELEX rounds
R3 ·final