HOXD10_PAX2
CAP-SELEX sample HOXD10_PAX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TTGCGGAAATTAACGTTACGCGTGGCCACGCTTCACTGCC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:d228fca1a050
|
40 | — | — | — |
|
GACTCGTGATGCGTGACGAATGGGTTCACTGACCGCATCA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:17f2b957c833
|
40 | — | — | — |
|
AACGTATGCCTCCGCTGTCGTTAAGCTCACTCAACCGGAA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:06c558a9a777
|
40 | — | — | — |
|
CAGCGATCCCGTCACGCACCACTTGTTTTATTGCCTGGAA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:bf1656e32559
|
40 | — | — | — |
|
ATCACGTTACGACCGCGTCTTAGGGCGCGTTCATGCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:80b332f57ea5
|
40 | — | — | — |
|
TGCGTGACGCTTTTACGGCTTCACGCATGACTGAGTCGGT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:965d9e394fa4
|
40 | — | — | — |
|
ACGCACTGAAGCGTATCAAGGATTGTGCTTAACGACTTTC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:252cd1ce5c66
|
40 | — | — | — |
|
CACGCATGACTGCACTCCGCTGCTTTTTACGATTTCGTAT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:1b20f60e4778
|
40 | — | — | — |
|
AGTGGCGAAGCACTGCTATTAAACCGATGGTGCGTGACGC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:893045a13332
|
40 | — | — | — |
|
TGCATTCATGCATGTCGCATCGTTAAGCGCTGGCTGTATC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:0d2cba805986
|
40 | — | — | — |
|
GCTTGACGAGGTCACACTACTCGCGTGCGCTGAAGCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:bb8748b941ff
|
40 | — | — | — |
|
GCCATAGATTACGCACTCGCCGAGGTGCAACCATGCGTAA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:e46e00666914
|
40 | — | — | — |
|
GTTGCGCATGACCGCGCTTTACGACATATACAGAGCCTAC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:83df3b9330a4
|
40 | — | — | — |
|
CCCCATAAAACGCATCTGGTTACGCCTCATTAACTTCACA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:4caae8bd8fb2
|
40 | — | — | — |
|
GCCCGTCCATGTGATTAATGACCCGTGACGTCATATTCCA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:fc556439432d
|
40 | — | — | — |
|
CCTGTGCATTTAACGACCTGGCACTAGACTTCACGCATGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:edaadcdc6131
|
40 | — | — | — |
|
AATTCGCATACTCCACGCATGACCGATTTTATTGCCCGCC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:8f50ed906235
|
40 | — | — | — |
|
GCAGACACGCTTCGTTGCGCATGACCGCACACGCGCTCCA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:856055e4c25f
|
40 | — | — | — |
|
ACTGCATGCTCTGCCAGCCATAGCAACCACTCATGCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:b84a05b3e6b0
|
40 | — | — | — |
|
ATGCAACCATGCGTACCTGACCGTTCCGGTCCAATGCACA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:f7830b16a5f7
|
40 | — | — | — |
|
AACGTGAGCTCGCTATGCTTCAGTGGAGCGTGAATAATGG
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:68b51c71564b
|
40 | — | — | — |
|
ACCATGCGTAACATCAATGTGGATTAATGATGCGTGACAC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:681b1245c8c4
|
40 | — | — | — |
|
CAATCGAACCATCGCCTCATTGCAATTCAGTCATGCATGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:2d7c9db1d621
|
40 | — | — | — |
|
ACCTGTTGCTCGTTACATGATCGCGCCCGTTCAAGCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:f1ef60301e40
|
40 | — | — | — |
|
CTTAATGAGCCGTGACGGCCCACGCCGTGGTGTACTTCCG
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:753eec50ccdc
|
40 | — | — | — |
|
CTGTGCGTTACGCTTCAGTGGTTTGGTAGCTCAACCATGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:f62138bb5a48
|
40 | — | — | — |
|
CACAGGTTCGTTCCGCATCATTAACCTTTAATTGCCGAGC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:80d2278e0852
|
40 | — | — | — |
|
AGTTCCGGATCACTGCGTGCCCGCTCACGCGTAGCGATTG
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:ce7e5ed2f5ec
|
40 | — | — | — |
|
CAATTAATGGTCCGTGACGTTGAGATGCTCAGCAGGAGGT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:c4402e170ae6
|
40 | — | — | — |
|
TTGAACCACCAGTTAATGATCCGTGACCGGCACACCCGGC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:0d313c0e0945
|
40 | — | — | — |
|
CGTGGCGCAACAGTTAAGTGCTGTGCTCACTAGACCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:7143f5252194
|
40 | — | — | — |
|
TTCTTGTGCATTGAGGCGTGACTAATTGTCAGGTGGCCTC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:07c8a1831956
|
40 | — | — | — |
|
ACCACCACCCACGCGACGTCACCGGATGCGTCACGCTTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:c8ac3b08f71b
|
40 | — | — | — |
|
GTTTCGAGCACGCGGTTGCGTCACGCACCATTAACTTCAT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:b2e36218b1f6
|
40 | — | — | — |
|
AACGTTCCACGCTTGAATGATTTTACGATGTGTACTGCAA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:41399cc6193c
|
40 | — | — | — |
|
TAGGTAACGACATCGTCACGCTCTGACGATTTTTGCGCAG
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:0fdb961601b8
|
40 | — | — | — |
|
GTTGTTACGCATCATTAATTCTTTATGATTATCATGCGTT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:9014433a0eec
|
40 | — | — | — |
|
CGCTCTGGTCCCGATGCACTTCGTCACGGTTCACCAACTT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:4e6ad3c30063
|
40 | — | — | — |
|
CTCGGTGACGATGCGTTCACGTGAAAGCAGTGAAGCGTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:1a63ce244c23
|
40 | — | — | — |
|
CTTGATAAGTAATTAATGTTGCGCACTCCGTTACGCTTGA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:4c590a52d7ae
|
40 | — | — | — |
|
AGCATTCATCCGTGACGCCACGCTTGGTCTGTTTACAACC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:4fb2e7f166ad
|
40 | — | — | — |
|
TCTCCTGCTGTCGTCACGCACGATTAATTGCGAACATGGC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:df59adc6a1d3
|
40 | — | — | — |
|
AGCGTGCATGGTTACGCAGGCGTCATGCGCCGCTGCACGT
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:748851248b1b
|
40 | — | — | — |
|
CATCGATGATGATTAATGACGCGTGACGCGTTTAGTGCTC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:6dcdc73c53f0
|
40 | — | — | — |
|
CACCTTTCTCACGTCACGCTCGGATGCTTTTTATGTCCAC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:6fc2f62a3fd4
|
40 | — | — | — |
|
CAATAACGCCACGCTTCGTTACGCTTGACTGCACCTCAAA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:8d58756541c3
|
40 | — | — | — |
|
CCCACTCATGCATGCCGGGCGCAACGGAGCGAACGAGGCA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:69268ed6519e
|
40 | — | — | — |
|
CCCACACTATACGCTTGATTAGGTACTTAGCCAACCGGTA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:6ed64ceacf0c
|
40 | — | — | — |
|
TTACGCAACCCTTGCTCGTCACGCTCTACTGGACCGTGAC
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:57dbdaa2a00d
|
40 | — | — | — |
|
AAGTCATGATTTTATGTTCACCGTTCCGCATGACTGAATA
PANAPTA:P28358:HOXD10_PAX2:PRJEB66722:R3:6c0e402252e4
|
40 | — | — | — |
SELEX rounds
R3 ·final