HOXD12_IRF7
CAP-SELEX sample HOXD12_IRF7 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GTTTCGAAAACGAAAGTACGCATACCCTTTGTCCTTACTC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:57f58ca74d88
|
40 | — | — | — |
|
TTACTTTCGTTTTCCAAGCGATAACGATAACGTGCATCTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:977a2694af80
|
40 | — | — | — |
|
CGCTCGAACTGCTCAACGAACAGAAATCGAAACTAGCACG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:f9b1df43db68
|
40 | — | — | — |
|
TTCCCAATGGAACGACCAACACGAAACCGAAAACGACGCG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:3eef262a5acd
|
40 | — | — | — |
|
AAATCGGAAACGAAACTGGTGTGCGTTATGTTCATATGGC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:4b1c1a23e7f3
|
40 | — | — | — |
|
CCCCTCCGCCCCCTCCCCGTTCTCCCACCACCCAATGCAG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:779e551c49ec
|
40 | — | — | — |
|
AGCTCACCAAATCGAAAATAGGGTCCACACCGAGCGGCGT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:cbea5b8b2246
|
40 | — | — | — |
|
CGGAGAGTCCTAGCGAAATGTAAGTGGCACTAAAACGAAA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:9f6a017052f2
|
40 | — | — | — |
|
CAAACCGAAACTCTCTTCGATGAACTTTGCGGCCTTATCA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:a151a1d19b05
|
40 | — | — | — |
|
CCTCACCATTCAAATTAACACGAAACCGAAACAGCCCACA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:8dd33c84253e
|
40 | — | — | — |
|
AAGATTTCTCATGAAAACGAAAACGACGCGGAGACGCTTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:f7a4a9e0ec9e
|
40 | — | — | — |
|
TTAGCATTAGTTCCGCACTAATCCCCTCGTCCTTGCTTGA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:1b1a1c2e50bc
|
40 | — | — | — |
|
CAAACGAATAACATTCATACCAAAGCACACAAGAATGTGG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:63bb1b3a470a
|
40 | — | — | — |
|
AGCGTAGTAAAACCGAATCGAAAATGACATTTTCGCTCCC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:f2cbaee60371
|
40 | — | — | — |
|
AACGCTCGAAATCGAAATTAACTCACCTTTATGCAACATT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:cf1e87ebb926
|
40 | — | — | — |
|
CTCGACGAGCAGGGTACCACGAAAACGAAATTGCGACCAC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:4e6e2e9ed211
|
40 | — | — | — |
|
ATTCCCCATTAGTAACCAACTAACAGCAATGTAATTGTTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:2ebef981b8a5
|
40 | — | — | — |
|
GCCCAGTAAAAGGAAAGTGCCTAACGACAACCCGAAAGTG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:b43081691766
|
40 | — | — | — |
|
CACACCCCCCTTGCCACGCAACGTCGCCACCTCAATGATT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:73a9410a434f
|
40 | — | — | — |
|
ACGAGCTTACCTACTCGTTAAACCATTTTCATTTTCGTTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:b26a521070af
|
40 | — | — | — |
|
CCGACAGCAAGTCGTAACGGAATGTTACGACTCATTGAAA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:668411be71ff
|
40 | — | — | — |
|
CCGCCACCGCGCACACCCCCCACCCGTCCGCGCCCATCCC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:dd387d271bcc
|
40 | — | — | — |
|
CGATCACACCTTGCCATGCTCGCAGCTGACTCCCTTCCGA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:064bf315f8d7
|
40 | — | — | — |
|
CGAAAATCGAAATAGCTTGTTTTCCATTTACGCGCCAACC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:c769c006ae32
|
40 | — | — | — |
|
GCACGGCTGGCGAAACGAAAGTCCAAATATAGAACGCGCT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:3be67200d84d
|
40 | — | — | — |
|
ATTGTACGCTATACTCCCCTTATCCGAAAGCGAAACCCAC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:521504f5c7d1
|
40 | — | — | — |
|
AGAACGAAAAATGGTCCCATCGTAACGGAAATAAGACACA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:e45cff380ce3
|
40 | — | — | — |
|
ATCGTAAAGCGCCTACGCGTTTACGACTGATATGAACTAA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:399417345c04
|
40 | — | — | — |
|
ACCGAAACTACTTTACGGCCCGATCAGCGTTTTCGATATA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:53f9a644e231
|
40 | — | — | — |
|
GAATCGAAAAGCGAAAACACGTAATTTCAGCACTCACATT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:df934088ed2b
|
40 | — | — | — |
|
GATCTCGTTAGACGATTTGAAACCGAAACTAACGAGCGCT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:cd1879639d9c
|
40 | — | — | — |
|
GAATATTGGACAGGCAGTGCTGGGCAAGCTGAATCACCAT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:4747610a9edb
|
40 | — | — | — |
|
CCAACGTGCTGTATCACTGCAACCGACTGCGCCTCCCCCT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:05f44e9a8590
|
40 | — | — | — |
|
CCTTCTCCATATCGAAAATGAAACGTCGTAACACCCTCCA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:0c38797c09ab
|
40 | — | — | — |
|
GAAAACCGAAAACGGACCTAGGCACACGGTTTAACGACGT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:de5ed8db3569
|
40 | — | — | — |
|
AACCGAACCGAAACTCATTTCGAAAATAGCCACTTCTCTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:5795cbe3e942
|
40 | — | — | — |
|
GCTACTTTCACTTTCACACTGAACTGTCTATACACCACAC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:6ff224876ec5
|
40 | — | — | — |
|
GTACACCGATTTATTACCTTCGGTTTACGAAACGAAAATT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:c69445ec27b7
|
40 | — | — | — |
|
GGCCCGCCCACCCAGGTCCCAATCGTATCAGACCACGTTT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:4f5a6503f94b
|
40 | — | — | — |
|
GACTTTCCGTTTTCGTACCCCCTCAAGACCCCCGCACTCC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:c5806c1e5ab3
|
40 | — | — | — |
|
CTGTCACCCCATCTCTTCCGTATCCCCCTCTCACGCCACA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:08537f41b34d
|
40 | — | — | — |
|
ATACTAATGACATTTTCGATTGAATGAACCGAAATTACGG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:f89360762129
|
40 | — | — | — |
|
TCATCGTAAACCTGCAGCAAGTTTCACATTCGAATTGAGC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:229c619406c4
|
40 | — | — | — |
|
GAGGTCACTGACCTATAACCTGTGCTCCCAGTCTCTGCTG
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:aab110995304
|
40 | — | — | — |
|
CATCACTGTCCTCTTTCCGCCTCACCCTTCCTGTGCCCAA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:9ca16374e821
|
40 | — | — | — |
|
TCGAGAACGAAAACAGTACGGAAGGTTTTGCTCTCGATTA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:61e2ffd739c5
|
40 | — | — | — |
|
CTGACCTTCCCGCCACCGATCCACTCCTTTCGAACGACGC
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:130af5c60371
|
40 | — | — | — |
|
GTTGCGAAAACGAAACATCGATAAAACTGATACCCTATGA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:4cb814d6c523
|
40 | — | — | — |
|
CGGATAATCACTTTAAATGCTGTGAAGTGCGTTGCAAGTA
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:57acdcc9b164
|
40 | — | — | — |
|
TACCGCCACCGCCTTCCACAAGCCTGCCCCATACCTGCCT
PANAPTA:P35452:HOXD12_IRF7:PRJEB66722:R3:67186d5d7d6c
|
40 | — | — | — |
SELEX rounds
R3 ·final