HOXD12_LMX1B
CAP-SELEX sample HOXD12_LMX1B; Mixture-SELEX sample HOXD12_LMX1B · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCATTAACTGTTAATCGAGTATCCGGACTTCGTTCTTATT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:241212f5807a
|
40 | — | — | — |
|
GCACATCGTTAAACGATGTGAACTGCAGCTATCCTGCGTC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:6a9eb5df4a48
|
40 | — | — | — |
|
TCATTGCGTTTACGACATCTGCAACCCGATACGTGCCTAG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:406b46e3c722
|
40 | — | — | — |
|
CAAACCGTAATTATGTCATCACGCATACATTACGACCGTT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:05eb3cb133c5
|
40 | — | — | — |
|
ACAAGTCGAACGCATTAGTCGTTAATCGGTTAGGTTAACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:8d767992d005
|
40 | — | — | — |
|
TCAACGCGACCCCGTTTACGACCTAGCGAGACGACGTCAC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:d6189da03cf1
|
40 | — | — | — |
|
ACGGGGTTTACGATGCTCAACGCTGATGCGTCGTAAAAAC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:a28babdaae6e
|
40 | — | — | — |
|
ACATGTGCGTGCAACGATTACGTAGCCCACGTGTTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:3caf30124242
|
40 | — | — | — |
|
CCTTGCACCAACCTGACTGCTTCGTTATTAACCTCGGAGG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:458f1673ec67
|
40 | — | — | — |
|
CGCTGATGCCCTTCGCCTATTAGGACCGATTACGCACGAG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:e2003ee66e56
|
40 | — | — | — |
|
GCCACAGACTACGCGATACGTACGTCACAAAGGCTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:7b055ca1a7ac
|
40 | — | — | — |
|
TTGCCCTGCGTACGTCATCTTAATGGGCACACTCGTTATT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:561339c2238e
|
40 | — | — | — |
|
GCCCTGTACTAGAGCCGTTGTCCTCACAAGGAAGTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:134d1ca92833
|
40 | — | — | — |
|
CGAGTGGAAAATCAATTAATTTCCGGATCAAAAGCTCGTT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:1c709cecbbb7
|
40 | — | — | — |
|
AATGCGGTGTAATAACAAACGGCATATTCGCTTGAATGGA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:690ffb1bcb3e
|
40 | — | — | — |
|
CGCGCCCAGCCGGGACGATTAGCGACAACACCGCTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:4786c84f3036
|
40 | — | — | — |
|
ATCTGATCAGTCCGTGCAAATGCAGGGGCACTAATTACCT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:9e5dae28e6c6
|
40 | — | — | — |
|
CTGGTCTCGTGGCGCGTGCAATGCGGCAGCGCAATTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:cab539ac2b56
|
40 | — | — | — |
|
TTGGCGATCCGTACGGGCTTCACGCCGAAAGACGTCGTAA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:6861f7015b3a
|
40 | — | — | — |
|
CAGCCGCAATTGGATATTTGTGTGGTTACGGTGTAGTTAG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:84ca3130f830
|
40 | — | — | — |
|
CATCCATATGATGAATGTGTTATACCGCCCTTGCACTGCA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:13a502ea18e8
|
40 | — | — | — |
|
GTTAACGACCTTACCCCCATCGGAACTATGAGCGCACTGT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:b22631715d9b
|
40 | — | — | — |
|
TCGGTACGGTCTAGGTGTTGTTGTAGGCCGTTATTTAACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:9e0f35863eee
|
40 | — | — | — |
|
GGAACGCGCACACTTTTACGATCACAGCCCTAACGACGTA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:36af61d8cbef
|
40 | — | — | — |
|
TCTTAACAACTTGATGCGTCTTAAGTCGTTAACGCCTTGC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:f026055db87b
|
40 | — | — | — |
|
CCGGGATGCACGTCGGTAGTACCTGGCGACAACGCGCAGC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:cb4d155bde59
|
40 | — | — | — |
|
GACCAACAATCGCCTTCAGGTATGGACACCACGCCCTCCC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:cbf6acbf0ed3
|
40 | — | — | — |
|
GTCTGGCTGCCGATTTACGACCTGCCTCAGCTATGGCACC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:268c77dbe460
|
40 | — | — | — |
|
CGACCTTTACAACGCCCTTTGATACGGCGACAAGCTTAGT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:5c557a2d5f88
|
40 | — | — | — |
|
ACTGGCTGCCCGACGAGCCGTGCGTTCGACCCGTTTAACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:5e26f468edc2
|
40 | — | — | — |
|
CATACTGGCCGTACGTGTTTCGCGAGGTCACGCTTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:27def044a92c
|
40 | — | — | — |
|
TAACTAACCGTAGCCTGACATGCCATAATACAGTACATCC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:a90c218594f9
|
40 | — | — | — |
|
CGAGGACGTGACACGAGGCGTCGTGGTTCACGCTACCGGG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:49e599858148
|
40 | — | — | — |
|
ATTAGATTTTCTTGAGTGGATTTGCAGTGGTTGATAGGAA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:9f61d9da0642
|
40 | — | — | — |
|
CGCCACGCACGATTGCGGTCGTAAAACCACAAGTCGTTAC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:bd9fe78a6e8f
|
40 | — | — | — |
|
TGTTACAACTTAACGCGTTTATTGCTACCGTTATCCACTA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:b574da751721
|
40 | — | — | — |
|
CGTGTAGCCTATCGCAGCAATTACCCCTGTTTTTATTGCC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:20af68c16145
|
40 | — | — | — |
|
CCGCAGTCCCCATGATCGTTCGAACGCAGCCGTGTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:221306ef9e1c
|
40 | — | — | — |
|
CGCCCGCGATTCGTAAAAGCGGAGCTCTTTTACGACGCTG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:7a3c93d8a975
|
40 | — | — | — |
|
CGACTCGCCTCACAGGCATAGTCGCAATAAAACCTTTCGC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:32a8a0d7a393
|
40 | — | — | — |
|
AACGTATCGCTCGGGCTGGGTGAGAAAAGGTCATGTACGA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:07370fb5b374
|
40 | — | — | — |
|
GTCCTGTGTCGATTAGGGCGTAAAATGGCCTGATTTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:05796012880f
|
40 | — | — | — |
|
CGCCGCACAGTGACAGTAGAGTGCCGACCACAAGCACGCT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:59213ea6a397
|
40 | — | — | — |
|
TGGTTTGGTTCTTGTCGTGTTCATTAATCAGTGTTTAATG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:d0826240defd
|
40 | — | — | — |
|
TCGCGGATCATAAGTTTATTACCGTCAAGGCACGCGCGTA
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:dcc4a57bd1e6
|
40 | — | — | — |
|
TGTAGGCTCTAACTTTGCGGATCCGTTTTACGACGGGACC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:9fc7aa615756
|
40 | — | — | — |
|
GACGAGTACTTACCCGTTGTGGCCTATTAATTACATCATC
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:d56768c39b96
|
40 | — | — | — |
|
CACCTAGAGTGCGCATCGTCGTAAATAAGGGCCTGCTATT
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:a6548eec0470
|
40 | — | — | — |
|
CAATCCTCATACACCCTCGCGGCCAATCTGCACCCACCGG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:94555d89e0d3
|
40 | — | — | — |
|
TGTAGCGTGTCTGACGTGCCACTGACGCGCATGATTTACG
PANAPTA:P35452:HOXD12_LMX1B:PRJEB66722:R3:a59eca98a6a5
|
40 | — | — | — |
SELEX rounds
R3 ·final