HOXD12_SOX11
CAP-SELEX sample HOXD12_SOX11; Mixture-SELEX sample HOXD12_SOX11 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCGGCCAAACAATACTCCATTGTTTGCACTACATCAAGCG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:5ce90055cbf7
|
40 | — | — | — |
|
CAGTGCAATTGCAGTGTCCATTCTGGATGTCGCGAACGCT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:b88a089810dd
|
40 | — | — | — |
|
AGAGGGCCAGTGCAATTTCAGTGTCCTAACGGATGATAAG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:55fdbae1c000
|
40 | — | — | — |
|
ACAATTCCCATTGTCTCCTCTCGCGCCGTGGCCGTACAGG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:ba98b8935cf5
|
40 | — | — | — |
|
CACGTAGCACAATGACGTATTGTGCCGCTTAATGGCCACT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:0209b08a9527
|
40 | — | — | — |
|
ACGCATCCTCGTAACAATCTCCATTGTGATTTACGAGGGC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:38f9262af0bc
|
40 | — | — | — |
|
TCGATAAGCCACGTAATAAAGACCCCTTTATTATGGAAGA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:75dff6a61fb5
|
40 | — | — | — |
|
TTAGGGTCAAACGTACGAACAATTGCAGTGTTGCGTCAAT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:0010e0af5ef2
|
40 | — | — | — |
|
GCTTGTACTATTTGACACTGGGAACAATTTCAGTGTTCCC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:9bf1b0d71163
|
40 | — | — | — |
|
TGAACGTACGAATGGAACAATTGCAGTGTTACCACCGGGG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:113dbdb3a27a
|
40 | — | — | — |
|
CGACCCAGTGCACCCGTATACTGATTTAGCGTCATGCACG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:5e8036305bcf
|
40 | — | — | — |
|
TTCCCACAACTCAGCCCGAGCCAGAACAATTGCAGTGTTC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:b47293920f4c
|
40 | — | — | — |
|
GGACTAGCGTGGCTATAAATCCGCAATTTATAGTCGGCAC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:6cebe8d943bd
|
40 | — | — | — |
|
GGGATGAACAATTGCAGTGTTCACACCAGTGAGTGAATAG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:7ddc92a81c1a
|
40 | — | — | — |
|
AATAAACGTTACACGATTACCGTTTTATTGTTCTGTTCTA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:dd6158cb307b
|
40 | — | — | — |
|
AAGTACATCACTAATAAATCCAATTTATTAGCGCCACTGC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:b170037d9e11
|
40 | — | — | — |
|
TACCACAACAATAACGTATTGTTTATCGCCTTACTACCCA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:254e0f7889a6
|
40 | — | — | — |
|
AATGCCTTGCCAAACAATAAAATGACTATTTTATTGCATC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:a9dd84ae1612
|
40 | — | — | — |
|
GAACGTTCGGCAATGCGTCGTAACTACGCGTTACGACTTA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:50929d520184
|
40 | — | — | — |
|
AATAGCTATTGTCGTAAACAAGCGCGTATCCTGACGCAGG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:7913f744b00d
|
40 | — | — | — |
|
ACATAACAATAGATTCATTGTTACGCCTATTCATCGTCAA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:81b9cb31fbbd
|
40 | — | — | — |
|
ACACCTAACAGTCTGTGTCACCAAGCTAACCACCAACCCC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:0465a47fd86a
|
40 | — | — | — |
|
CGTTGGGGGCCCACTTGTCGGGAACAATTGCAGTGTTACC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:c2282503e233
|
40 | — | — | — |
|
AGAAGCATGGAAGGGGTGACAATAACTATTGTTCATGACG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:2a0a2d793058
|
40 | — | — | — |
|
CGCCTGGCGAGTGCGCAACAATGATATTGTTCACATCAGC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:3ea1ad232b7c
|
40 | — | — | — |
|
AATTACATTGCCTATCCCAACTACGGGTGATCAACGTCCG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:f48783615fc3
|
40 | — | — | — |
|
TGGCACATTGTAAAGACACTGGTTTACAATGTTTCATTCT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:8a000c64b97d
|
40 | — | — | — |
|
GTAATAAAACGAGCGTTTTATTACGAGAAAGCATACTACG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:7793241afb06
|
40 | — | — | — |
|
AATGAGACTCGTTAAGGCCTATTGTTCCGTCGAACAATTG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:89df8fc5886b
|
40 | — | — | — |
|
TTGAAGTAACTGGTGTATGCACAATAGCATTGTGCTACAG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:fee73366a344
|
40 | — | — | — |
|
TTCGTAAAATGTCATTTTACGACTCTCAGGCATGCGATGA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:e1cf52cc2c40
|
40 | — | — | — |
|
GCACATCCCTAACAATACGCACATAAATCAGCTTTATGTT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:4b3fcedb155b
|
40 | — | — | — |
|
CGGGGAGCAGAAACAATTGCAGTGTTTCGCGGTGTCAACC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:58ae14a1ab8c
|
40 | — | — | — |
|
AATCAAATGGCCTTGAACAATTGCAGTGTTCAATTTACTA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:984d7d9f9d4d
|
40 | — | — | — |
|
AGCGGTTTAGACAATTGCAGTGTCTATGTTGATAAGATTG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:4237eb88ac88
|
40 | — | — | — |
|
GACACGAACAATTGCAGTGTTACGTCCTCCAGGTAACGCA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:6f343341de15
|
40 | — | — | — |
|
GATTACACATTTAAGAACAATTTCAGTGTTCTCAACGTAT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:e26ae5a09968
|
40 | — | — | — |
|
GTGCAATTGCATTGTCTCCTGACGAGAGTTCCGACCTTTC
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:1ec3bfb85083
|
40 | — | — | — |
|
GAGGAGGTGATGAACAATTGCAGTGTTAAACACCCCAAAA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:7e89ebc59ec2
|
40 | — | — | — |
|
AAGCGCTGTAATTAGCAACAATTGCAGTGTTGGCACAGGA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:15c31f18efa9
|
40 | — | — | — |
|
AATGCATACTCTCACATTGCGCACAATAATCACATTGTTG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:0197b5759d75
|
40 | — | — | — |
|
AATGTCATTAACCGTGCATGACAAAGCGGTTAATTGCTTG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:80d938ec7fbf
|
40 | — | — | — |
|
TTGTGGCGGATCAATAAAGACCTCTTTATTGTCGTACGAT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:06ce517dd6b7
|
40 | — | — | — |
|
AGTGAGGCCTAACAAAGGAAGGCTTTGTCCTGCTTTACGA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:8abc493da29b
|
40 | — | — | — |
|
CCGTTACGTCCGCGCAACATTAAATCCCATTTAACGGTTG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:6ef0574686e7
|
40 | — | — | — |
|
CCACAATGGACTATTGTGATGACACGTACGTTGCCAATGA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:bb40c8415901
|
40 | — | — | — |
|
GACACAAATGCGTAATAATTCCCACATTATTACAACGTTT
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:9dc859e7adec
|
40 | — | — | — |
|
AACGGCCTAAGACAATGGAGTAGTAAAATGCATTGTTACG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:3799c42b83b1
|
40 | — | — | — |
|
GACAACAGCTTAACGACATTGTACGTAAACAATGAGCCTA
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:dedeae936e58
|
40 | — | — | — |
|
TCCGGCAAAGGAGAACAATGTGCAGTGTTTCCGTCCCGCG
PANAPTA:P35452:HOXD12_SOX11:PRJEB66722:R3:20debb78c7dc
|
40 | — | — | — |
SELEX rounds
R3 ·final