HOXD1_PAX2
CAP-SELEX sample HOXD1_PAX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCGACAATAATGCCCTTGCTCTCTGCGCTCGGTCAAGCGT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:91bdde52a4f8
|
40 | — | — | — |
|
TCCACCTTGACCCACTCATGCGTAGCGGCCACGAATTGAA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:71105ed20758
|
40 | — | — | — |
|
ATGCATCCAGGCGTGACGAACCGTGACGATGGTCATTGGC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:5e2e52471652
|
40 | — | — | — |
|
CTCAGGACAAGTCGCAGTTAATGAGGCGTGACGGTTCAGA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:2ac05487cd89
|
40 | — | — | — |
|
ACCCATGAAACCATTACCCGCCTACCCCTCTTCATACCGT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:3399c50bb175
|
40 | — | — | — |
|
TTTTCGATCATAGTGGATGCTGTGCAACATGATTGCCATC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:df601d28bfc5
|
40 | — | — | — |
|
CGGCATCCTCCGACACGGTCCAACGAGCAGGAATCACGCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:a57ce9c407c7
|
40 | — | — | — |
|
CGATCGCGCCGCCACGCCTCATTAAGCACAGTATGAGACA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:bdfc5c6708a7
|
40 | — | — | — |
|
CTCATGTCGTTCCGCCTCATTACCTTTCCCTGCGCCAACC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:805be02df18a
|
40 | — | — | — |
|
GGACGCAATGAGGCGTGACGGATGCACTCTGCCGGCTGCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:0468b4353448
|
40 | — | — | — |
|
CCGTGTGCACATTAGTCACGCCTCATTGCACTTCGCTGTT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:b87b6f00aeef
|
40 | — | — | — |
|
TCACTAGCTGACGTCACGCATCAGAGCCCTTGGCCGCACC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:3d769ec3054c
|
40 | — | — | — |
|
GTGCCCCTTAAACGGATGACTGACCACGTCGTCACGGTCC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c5114aebe152
|
40 | — | — | — |
|
CAGTATGAAGCTAATGTACCGTGAAAGAGCAATGATGCGT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c1bdf284db34
|
40 | — | — | — |
|
CCTCGTTACGCCTCATTACCCACCCCCTTACGCTACGTAG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:ca6624438f19
|
40 | — | — | — |
|
GCTAACCTCAATACTGCATGCTACCCAAACTGTTTAAAGC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:7f57956245cd
|
40 | — | — | — |
|
GGAGCACGTAGCCCTCCCAACGTATACATTTGGCGCCCAT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:7d21da1996ce
|
40 | — | — | — |
|
CTCATCCAGGCGTGACAACCAGACCGTGAACCGTATCCCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:d47d73e686d7
|
40 | — | — | — |
|
TTGCGATGGCGATTCTTATGTGCACCGATGCGTGACCTGA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c7a10ea52365
|
40 | — | — | — |
|
CCACCAGCCTACCGTGAGGCGTTACGCCTCATTAGGTACC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c32bf237a149
|
40 | — | — | — |
|
TCACACCTTGAATAAGCTCAGTGACTTCCACGCTTGATCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:748a498dcda3
|
40 | — | — | — |
|
GAAGTCTGACGAGAGTCAAGGAACTTCCTACGAGTTCTCC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:04f30c90caeb
|
40 | — | — | — |
|
ATATACTCGCCTTTAGCAGGCTAGGGAGATTGCACCTAGG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:6f2c2488a93c
|
40 | — | — | — |
|
CGTCAGTGATTCCGGTCACGCCTCGGTGCCCTTTGCAACT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:b7bc873fca12
|
40 | — | — | — |
|
GGCAAAAAAGATCATCTACAGAATGCTCATTATGGGGGCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:35b27597f1c7
|
40 | — | — | — |
|
CCAGACACACTGCGTGTCAGCGCTCAGTGGAGCATGACTG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c0d0840ea7e0
|
40 | — | — | — |
|
AACAAGTCGGGTGGAACGTTTCCGCACGAATAAACCGCAC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:9f3b0cf117fa
|
40 | — | — | — |
|
GCCTACGGAACATTCATACGGGCCCTAAAGCAGGCTGAGA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:32aaca2b449e
|
40 | — | — | — |
|
CGGCTTCACCAAAGTTTGACCCTTGCGACCTTACTTCCTA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:b0730fbdbaba
|
40 | — | — | — |
|
ACATACCGCATGCTACAGCGTGGGATGATGTAAGCACTGC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:69a0f7be0a71
|
40 | — | — | — |
|
GGCGTACATAATGACTTTCCTTAAGTCACGCATGATTGGA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:b03943acfca4
|
40 | — | — | — |
|
CAATGTGGGTCGCCACGCATGATTAACTTCGCACGTTCAG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:f9ca4c0a6477
|
40 | — | — | — |
|
CCCACCTGCATGCATGATTAGTCAACCATATCGCCTACCA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c4b599f6e864
|
40 | — | — | — |
|
ACCTAAACGATGGATCCCCACACATAGAACATCGATATGG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:85f654e832cd
|
40 | — | — | — |
|
TTGCGCGACCACTCATGCGCGACGTAGCGTGACCAGACTA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:a9c776b1bf4b
|
40 | — | — | — |
|
TCACATGACATTCTGTCACGCATGATTGCGTACGGATTGT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:41fdee252b08
|
40 | — | — | — |
|
CCTAATCAACCGTGACTAACCGCGCGTCGATCAGTCGGAT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:71064a0d07d2
|
40 | — | — | — |
|
CGCAATTACCGTCACGGATCATTTGCCGCACTAGCGCGCC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:ed0fc754d202
|
40 | — | — | — |
|
CAGCAGACCTTGCACACGAGTTAATGAGGTGTGACGGCAG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:f98c4e90a7eb
|
40 | — | — | — |
|
GGTGCGATCGCTCATGCGTAACCGATACGGCATAATTCAG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:c994d90221ad
|
40 | — | — | — |
|
GGGACGGTTGAGTGACCGGTCCGTCACACCTGGCTGCACC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:5dcd5a6a77f1
|
40 | — | — | — |
|
GATTCGTCAGTGAAGTGCTGAACCGCTGAGTACGCTCTCT
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:205e3c5c1f43
|
40 | — | — | — |
|
TGCGGTCACGCATGGGCGCCCAACCGCGACACACTTCCAG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:489d7e6f4903
|
40 | — | — | — |
|
CCCGCTTTACGTCACGCTTGGCCGCTCAACCCACGTCATC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:e692334d0de0
|
40 | — | — | — |
|
CGCGGATACACTACGTCTATCTTAATAGCTATGGGTTTTG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:744916ec41c0
|
40 | — | — | — |
|
CAGTGAAAAATGGCTAATCGCAGTTCAAGTTTCAGGTACA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:5fe73a901f0a
|
40 | — | — | — |
|
ACGCGTAGCTGGCTTCAATGGCTTGCAATCCGAGCAAATC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:cbef6f6f55f0
|
40 | — | — | — |
|
CGCAGTTGACCGTCATGCTTCGTTGGGCAGATCGTTATCG
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:07a5e323ff10
|
40 | — | — | — |
|
GTGTTCCCGCTGATCGAACTGAACCGATCATGCGTAACGC
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:7635eb449884
|
40 | — | — | — |
|
TCAATGAACCATATCGTTACACTATCGATTTATCGCGCCA
PANAPTA:Q9GZZ0:HOXD1_PAX2:PRJEB66722:R3:71f329df4f3a
|
40 | — | — | — |
SELEX rounds
R3 ·final