HOXD1_TBX21
CAP-SELEX sample HOXD1_TBX21 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AATTGATTTGCTTCGAAGGTGTCGGAGGCTAACGAGGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:6e41cb282a62
|
40 | — | — | — |
|
TTAACACCCAATTAACGTGTTCACACTTCTACGTCTCGTC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:52662576503e
|
40 | — | — | — |
|
TCACGTAATTGACATGTGTGAAACTCTAACGAGCACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:159d51284fb1
|
40 | — | — | — |
|
ACTCACCTTCACACCTCATTAACATTTCGCACCTAAACGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:13dd614b40ba
|
40 | — | — | — |
|
TCGTCACTTCACACCTCATTTAGCACATTGCACCTTCCCT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:75dc76cdc79d
|
40 | — | — | — |
|
TTTCACACTACCTAATTAGGTTTTCGCACCTTCCAATACC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:2877f210a554
|
40 | — | — | — |
|
CCGCATTATTGATGAAGTGTTAATCAGTATGCCGATGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:f394a93c798b
|
40 | — | — | — |
|
ATTATGTGAGATCATTAACACCTGCAGCGCAGGAACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:c03023f58f3b
|
40 | — | — | — |
|
TTTTACGCAATTAGCACCTCATCACATTATCACACCCCGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:b96e0003773e
|
40 | — | — | — |
|
ATCGGCTCACACCTTTAACGACACCTTGACACCTATGCTT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:4492b99660bd
|
40 | — | — | — |
|
ATTACCGCCCCAACACCTCCAAGCACCGTTTCACACCCTC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:29d91c9b908e
|
40 | — | — | — |
|
TCCATTACCAGCAATTAACTCACGACACCTCGTAAGGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:e0e8d0bd70fa
|
40 | — | — | — |
|
CCAACACCTCGTCATATCTCATTAACACCTTCAGTCCCGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:5d8e8c93f581
|
40 | — | — | — |
|
ATTAGGTGTTAACTGCACAGCAGGACCCATTCACACCTAT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:7087344b362e
|
40 | — | — | — |
|
TTACGTATCACACATCATTAAGAACATCACACCTTCCGAA
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:fb26dd54a43a
|
40 | — | — | — |
|
GTGAATTAGGTGCAAATGGATTTCACACCTCATGACTTAC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:bf3a41832b0f
|
40 | — | — | — |
|
ATACCGCCCTTCACACCTAATTACCATTCACGACACCTCT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:1efc1fbe97a6
|
40 | — | — | — |
|
TTCCACACCTAATCAACACCTTACACACCTTCGTCCACTC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:5c127cc293fc
|
40 | — | — | — |
|
AAACGATCTAGCTAGACGTGCCACCTTCCTAATTAGGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:2eeb7a3fb3ad
|
40 | — | — | — |
|
ATAAGCCACACCACTAGGTGCGAACCTGCTAATTACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:6ab9bc3ece09
|
40 | — | — | — |
|
ACACATTACATAATTAGTTCACACCTCTCGTCGCTTCCTC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:3f079449ac0a
|
40 | — | — | — |
|
CACAATTAGCACCTAACTAATGACCTCACACCTTACTACG
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:6a39500e86f9
|
40 | — | — | — |
|
CGCCCTTAACGAGGTGTTAATAGGTCTCACGCCGTTGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:0248528ce9e8
|
40 | — | — | — |
|
CCTGGATTTCACACCTCATTAATCGCCGTTACACCTTTCG
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:aa848a159932
|
40 | — | — | — |
|
TTATCATTGCGTGTAATTGTTCACACCTACTATCACACCT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:4c2ab5e9a2e9
|
40 | — | — | — |
|
TTAACACCTAATTGCTAATCATCGTCTGAGCGACACCTAT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:9844b4afeadb
|
40 | — | — | — |
|
ATTACGGGATTGCTAACGATTCACACCTAGGCCCACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:f1ea9c972741
|
40 | — | — | — |
|
TTTCACACCCTATCACATGCCATTAGCACCTCGGCTACGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:779ee831998a
|
40 | — | — | — |
|
TCAGCCTAATTGTATAACACATTGAGTTCACACCTTTAGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:af8047dd010b
|
40 | — | — | — |
|
AGTTTACACCTCCTAATTACTTCACACCCTTGATCGCCTC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:cd7ab676769c
|
40 | — | — | — |
|
CCCATCACGTCCAACACCTAATCGACTACCTAACACCTAT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:ef10eaa299fe
|
40 | — | — | — |
|
ACACCTATACCGACGATGTGTTGATTAGTTCACACCTGCC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:3b7da8a86989
|
40 | — | — | — |
|
ACGATTAGGCTATCATAGGTGGGAAATCGTGACGACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:8244fddcbb3d
|
40 | — | — | — |
|
TACAGAATCATTGTGATTAATTAGGTGTCACAAGAGGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:700cc96d6597
|
40 | — | — | — |
|
ATTACATCACACCTCATCTCGTATTTCACACATGTGATAA
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:9215456ae5a0
|
40 | — | — | — |
|
ACTATTTCACACTTCCACTTTCTCGTTCGCACCTAATTAC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:7782d0582b70
|
40 | — | — | — |
|
GTCCCGACACTTAACACCCCATTAAGTACACTTCACACCT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:e64c812af799
|
40 | — | — | — |
|
CTTCACACCTCATTAACGTCATCAAACACCTTTCCAGCCA
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:5cfd2be123e3
|
40 | — | — | — |
|
CATCCCTAACGATGTGTGAACTTTCACACATACCGTTACC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:520abc9113e7
|
40 | — | — | — |
|
TCGATCGATTGCCACACCTTTAGTAACACCTAATCAGTCC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:6d26610716e7
|
40 | — | — | — |
|
ATAGGTTGTTAATTAAGTTCGCACGTTATGATTAACGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:47406d89ac70
|
40 | — | — | — |
|
ATTCACACTATTACCTAATGAAGGTAACACCTTTCCTGAC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:34f4f5cbd323
|
40 | — | — | — |
|
TCACTCACGCGTGCACATTTGCACCTACTCAACGAAGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:24b5169c01b5
|
40 | — | — | — |
|
TCAACACCTCATTTCGACACCCAACACCTTAATGATCCAC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:b7522d016bdd
|
40 | — | — | — |
|
TGCAACGCGACACCCCACAGGTTAATCGTTCACACCTCAT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:bd62ca4dea79
|
40 | — | — | — |
|
TTATCTACCTAATGTAATTAACACCTCTCTGATTGAGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:391f71631f90
|
40 | — | — | — |
|
TGCCATTACGCGTAATTAAGCTGAACACCTTAAGAGGTGT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:dc2543b1f4ea
|
40 | — | — | — |
|
CTTCATTTCATCATTAACACCTCACACGTATCAAACGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:ad3a095904af
|
40 | — | — | — |
|
TTCGATTATAGTTCACACCTATACACACCATTAGCACCCT
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:6fe182f1c079
|
40 | — | — | — |
|
AACATTGAGCTTAAAGGTGCAAACGAGGCTGATTAGGTGC
PANAPTA:Q9GZZ0:HOXD1_TBX21:PRJEB66722:R3:b63f2633d101
|
40 | — | — | — |
SELEX rounds
R3 ·final