HOXD1_TEAD4
CAP-SELEX sample HOXD1_TEAD4 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
AAATTCATGTCATGCGCGAAATGCGTAAGGCATCCGTGCT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:59c152a1194a
|
40 | — | — | — |
|
AATGCCACTACAGCGTTCCTCCAGCATTCCACGCGTGTAA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:b541fe02791e
|
40 | — | — | — |
|
GGCACATTAATTGAATTATTGAAATAGCTGTGACGTACAC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:c09b6a768f47
|
40 | — | — | — |
|
CCGCCCTGCGCGACATAGCTCGAATTCCTCTAGGCTTATC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:759a942c7cea
|
40 | — | — | — |
|
GGCGGCGTACAACGAATTCACGGAATACCAACGTGCTACT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:d8b511bc5b49
|
40 | — | — | — |
|
AATAGCTAGGAACGCGTGTTCCGCATTCCAAAAATGCATT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:db912099e4c6
|
40 | — | — | — |
|
TCAAGAATCAATAAAGCCCTATTGATGTTGCCTGCAGAAA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:8b6525127f34
|
40 | — | — | — |
|
GATTTTGACAATTTACGATTTAGGTCACGTGATGCCGGCT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:fbb89fa104ae
|
40 | — | — | — |
|
TACAATGGGAACGCGAGTTACGTGACACCAGGATTCCTGT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:a2ce7b684bfd
|
40 | — | — | — |
|
TACGGGATGATCACATGGTATGCAAACCCCGCATAGGAAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:dc4aa0705338
|
40 | — | — | — |
|
ATTCTCTCCATGCCATACATAATTCGGATTGCCGACCCTA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:9e8904c49c04
|
40 | — | — | — |
|
AACGTGTCGCGACGATGAAATCGATTGGAATTCGTGGTAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:d43b85db84b0
|
40 | — | — | — |
|
TTCCAGACAGCACATGCCATTAATATGCATACTTCGCGTA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:fc773af77264
|
40 | — | — | — |
|
ACAGTACGAATATCTGAGATAGAACAAATACCAACCATTT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:abf04574107b
|
40 | — | — | — |
|
CAATTTGGCGTTCGGAATGCAAGACATGCGCATCTGCGAC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:079d2ef49627
|
40 | — | — | — |
|
AATGCGAAATATTCCAACTACGCCGCTCCTTGCTTTTAAA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:309f546ab032
|
40 | — | — | — |
|
ATGTAACCCATGCATCCATGCTCGCAGGAATCTCCGGCAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:7d7357948a33
|
40 | — | — | — |
|
CCACGGAAAACTCCTGAGCCATGCATTCCCGGAATGCATC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:4bf57afcbbc3
|
40 | — | — | — |
|
GGTATGCAAAAACCCTGCGTAGTTGACATAATTACTCTCT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:1bd8118eb20c
|
40 | — | — | — |
|
TTCTTTGGTTAATACTTCGGATAGCTTCCGTGCATTCTTG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:a1d73079d729
|
40 | — | — | — |
|
AAATTTACATACCAGACATAGTTCTCAGTGTACTCATCCG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:96add7045523
|
40 | — | — | — |
|
GAAGTTTCAGCGCAAGCGATGCTTACAATGTAAGTGGAAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:4cf83474340c
|
40 | — | — | — |
|
CACAGGCATGCATAGTATGCATAAGCAGCAACCCGACATG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:0287f67a44f1
|
40 | — | — | — |
|
TACTTAGCATACCTCCCGTAGCCCCCTGACGCTGCGGCTT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:afaeb93aedd4
|
40 | — | — | — |
|
CTCATTAAATTCCTTTCATACTTTAGCAAACTTTCATGAC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:c78d203a2ff4
|
40 | — | — | — |
|
TAGCTTGGATTGCAGGCATATTATTCATAGGAATTTAGCA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:3b78f252d0d8
|
40 | — | — | — |
|
AATAATTAACATTCCTAACCAAGCTTGACCCGGATGGAAA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:f649c2b399cf
|
40 | — | — | — |
|
GAATCTAAAAAGGCAGATTTGAAATACCATATATAACGTA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:aba627de6ba8
|
40 | — | — | — |
|
GACACATGTTCCGAATTTCTTAAATATTTGAGCGGATCGG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:413ab54244b8
|
40 | — | — | — |
|
AATGACGCAGATTCCACGCATGCCGCTCCTGCACTAACCG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:5dc91f3bb5a4
|
40 | — | — | — |
|
TTACGAGGTATTCATGGTATTCATTTATTATCCGTACTTT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:ba4106ea6fb1
|
40 | — | — | — |
|
TGACAATTTTTCGAGCCATAAAATGCAAAAAATGTCATGC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:77d55971af7f
|
40 | — | — | — |
|
TAGCATTGCCATACCTACCAACATTCTACCCTAACCGACC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:d6c4aa58732a
|
40 | — | — | — |
|
TAATGAAAACGTTCACAATCATCATTGGCGCGTAGGGAAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:3afb447378a9
|
40 | — | — | — |
|
TCGAATGCCTAATTGGATCCAATCACCTTCTTTACATACC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:d089bd420e95
|
40 | — | — | — |
|
GAGCCCGATAACATTCCCTACATTCTGGAATGTGTATTCT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:729fcccbd48d
|
40 | — | — | — |
|
GCGTCACAACGCCAAACAGTTGCGGTATGTGATTAGGCGC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:0720efb8e673
|
40 | — | — | — |
|
TGCGGGGAAGTCCTGTTAGCAATGTGGCGGAATTCCTACC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:0f9ceb10a070
|
40 | — | — | — |
|
AGATCTCTCGGTGGATTGGGATGTAAAATACGTAGACTAT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:63e3b3fa1a5f
|
40 | — | — | — |
|
CAATCAATCAAGCGAATCACCCCCTTCGATCGATCCTTAC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:bd065afc94fb
|
40 | — | — | — |
|
ACCTCCATGACACGTTCAAATTCCTAGAACATTCCAAGCG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:2fa12734ed78
|
40 | — | — | — |
|
ATTACTGAGATACCGTTACGCATAGACGAAACTTTTTTCC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:76444a3cb21c
|
40 | — | — | — |
|
TTAAATTTGGCTGCTTTTGCGGCAGCCTTCGCATTCCACT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:ab3e5750d51a
|
40 | — | — | — |
|
CCAGAGAAACTGCGGAGGCATGTAACTCGCATTCCTAACG
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:774ddbf8fc6a
|
40 | — | — | — |
|
ATTCCTGAAATACTCGTGCCATCTCTTACGCCTATCCGGT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:75c84d1c6073
|
40 | — | — | — |
|
CCATCGCATGCCTGAAGTACATTACTGCCATTGTTCACCT
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:bfbb1b04a8e7
|
40 | — | — | — |
|
TTAGATACCATACATTCCTAACACGTGCATTTGTTTGGTC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:673dd4de1d09
|
40 | — | — | — |
|
GGAATGTCCTAAGATACGTGTATTGGGATGACTCACTAGC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:4b4ad6260d47
|
40 | — | — | — |
|
ACGTGAGTTGTGGTATTGAACTTATGTATAAGTTATGCAC
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:df03e83d5484
|
40 | — | — | — |
|
TACCAGAGATTCCTAAACAGGCCAACAGACTTCCAGCGAA
PANAPTA:Q9GZZ0:HOXD1_TEAD4:PRJEB66722:R3:adba14bad3ee
|
40 | — | — | — |
SELEX rounds
R3 ·final