HOXD3_PAX2
CAP-SELEX sample HOXD3_PAX2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CATTCACGCTCCGCTGAACCGTGACGTGCAATGCGTAAAC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:34fb27e966a0
|
40 | — | — | — |
|
ACGGCTATTACGCTTGACTGCGTCGCCACGGATGACTGAT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:927872f37762
|
40 | — | — | — |
|
CATTGATGTGCATCGGACGCGCATCGTTACCCACCAACGG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:227157678234
|
40 | — | — | — |
|
CGCAACGCATGACCTCACACTCGTTACGCTTCGTTAACCC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:5468e15ed6bb
|
40 | — | — | — |
|
GTCGCGCTTCATTGAGCGCGATCAACGATGCGTGACGTTG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:2f656c42aa3d
|
40 | — | — | — |
|
GTGCACTCAAGCGTGACCATGAGCACCCACCTGTATCGCA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:f0c04799b365
|
40 | — | — | — |
|
GATCATTGAACCGTGCAGTTACTGGTCACGCTTCGATGCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:a5f837ee1024
|
40 | — | — | — |
|
GCTTCACGCTCGAATGACGTGCGCAACCATGCGTGTAGTC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:006ce56f8937
|
40 | — | — | — |
|
GTATCGTCACGCTTGACCACACCTGAGTGCTTCGACGTCC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:45569fdd8d78
|
40 | — | — | — |
|
CAATGGAGCGTGACGAAATATGGTCAATGCGACTTCACGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:b433330a0e68
|
40 | — | — | — |
|
TGGTTCCGCATGAATGAGCACAACGTCGCACAACGTTACA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:97a7b5457815
|
40 | — | — | — |
|
GTGCAGTCATGCGTGGCGAAACGTTCGATAGGCTACAGTA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:728346434c6d
|
40 | — | — | — |
|
CTGCGGTCACACCTCAGTGATTTCGTCATGGATGAGTAGA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:b8cacebc776c
|
40 | — | — | — |
|
GACGCTAGTGCACCAATCGCCATCGGTCACGCTTGACTGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:30464e1761d6
|
40 | — | — | — |
|
TAGTTCGTGATGTGCAATCATGCGTGGCGGAGTGATTGCC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:12ea4c9e82a4
|
40 | — | — | — |
|
GGGCACCCGGCGGAACCGTCACGCATGGGTGCGCGTCTGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:91c67d5683ee
|
40 | — | — | — |
|
CAGTGGAGCGTGACGCGTGCACCGCTAAGTGTGCATTGCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:0625ebfce3c8
|
40 | — | — | — |
|
GCAGTTTTCGCTATGCTTGACTGGTCATGCGTTCATGCTC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:2cee63a50812
|
40 | — | — | — |
|
ACGAAAAGGCCAATTAGTCACGCATGGCTACACACTCGCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:d4a526efecb5
|
40 | — | — | — |
|
GGGTGTACGCGATGCGCATGACTAGTCAAGCATGATAGCA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:584a0d962bfb
|
40 | — | — | — |
|
TAGCCCGTCACGCATGACTGACTCGTTGCTCACCCTACCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:2b3131f077a3
|
40 | — | — | — |
|
TCCGTCACGCATGGTCGGTCATGCGAGTCCGCGTTTGGCA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:c4be1712d006
|
40 | — | — | — |
|
CCTGACCGTCACGCTCCGCTAGTCAAGCATGCACCGTCCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:638695c13109
|
40 | — | — | — |
|
AGTATTCACTTTCAAGCCGCGTACCGTCACGCTTGACTGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:130d10426b64
|
40 | — | — | — |
|
GCCTGACCAGCCATGCGTGACGGGCAATACACACCTGCCC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:076858602292
|
40 | — | — | — |
|
AGCGCGGACACGCACGCGCGTTTCGTCACGCATGATTACT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:356cd2d4ab76
|
40 | — | — | — |
|
TAGTCTACACGCGTGCCTATCCACCGTCACGCACCGTTGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:471b8ce91dbf
|
40 | — | — | — |
|
GCGTGTTCAATGGTGTGCAGCGATGCGTTGACAACACCCT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:d419eb2d6327
|
40 | — | — | — |
|
CCGTTGATCGCTTGGGCAACCATGCGTGACGACTTCCTAA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:1c1ef1d799f0
|
40 | — | — | — |
|
CAGCTACCTAGTCAACCGTGACGATACACCCAACATGCGT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:af019fed6139
|
40 | — | — | — |
|
CCAGTCTCGACGCGCTCGGTGCGCGTCACGCTTGAATGGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:5ab586663b97
|
40 | — | — | — |
|
CAACTACCATAACGCACCGTGCTTATCCATGCGTGACCGC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:f158db508cee
|
40 | — | — | — |
|
GAGTATCAGAGCGGAACGTCACGCGTCACGCATGATAGAG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:dcc869392d43
|
40 | — | — | — |
|
CCACTGAATGCAGCGATGCGTGGCGAATTACATGTGCGTA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:f57ec903dfd2
|
40 | — | — | — |
|
TGGTCATGCGTGACCATCGTTATCGATACCTAACGCCCTG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:c2a997778684
|
40 | — | — | — |
|
GCCGTCGTCACGCAACGTTGCACACCATTGCATCCCTAAT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:bbbf4c7638fa
|
40 | — | — | — |
|
GATGCTTTACGCGACTGATCGTCGTCACGGTCCAGTGATC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:d8f16a02288b
|
40 | — | — | — |
|
TCACAGTGTGCTCACTAGACCATGACGCGGTTCACTGCGT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:62255c3e0700
|
40 | — | — | — |
|
CGTCACGCTTGAACGCTCTCACCGCACGCCACGCGCACAT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:a93b7eb394b4
|
40 | — | — | — |
|
GCTGCCACGCCTTCCGTCACGGTTGGGTAGCCACGTTGCT
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:91f77387e440
|
40 | — | — | — |
|
GTCAATTACTCAAGCGTAACGACGTTAACCGTCACGCCTC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:27536a26335a
|
40 | — | — | — |
|
TGTACTTCCGTCCAACTCGTTTCGCTTGATCGATCATGCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:7396f177539a
|
40 | — | — | — |
|
GCATTCATGCGTAACGACGGACTGATTTTTGCTCTTTTCC
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:1ecc4bcf3274
|
40 | — | — | — |
|
GCCAGGCGTCACGCTCGGTTGCACATGATTGCCTCACTAG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:ed11b41f4775
|
40 | — | — | — |
|
GCACGTTACATTAGCAAACCATTGAAGCGTGACCAAGCTG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:d82d34dd595d
|
40 | — | — | — |
|
GCAGTGATGCTGAACGTTGTTCAACGAGGCGTAACTCGCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:5dc6ce88e074
|
40 | — | — | — |
|
GTGTGCTAATTGCGCTCCGTCGTCACGCTCCAACGAACCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:2bc04760a892
|
40 | — | — | — |
|
GCGATTAACAGAACGCAACGAACCGTGACGAGTGAAAACA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:2608f93594e2
|
40 | — | — | — |
|
ACTCCCTTCCGATCCCGCCGTCACGCCTCAGTGCACACCG
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:32018ed386d8
|
40 | — | — | — |
|
TACTGACTCATTGGAGCGTGACGACAATAGCTGTCTTGCA
PANAPTA:P31249:HOXD3_PAX2:PRJEB66722:R3:c185c0c6fe1a
|
40 | — | — | — |
SELEX rounds
R3 ·final