HOXD3_SOX11
CAP-SELEX sample HOXD3_SOX11 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCTCGTGTGTTACACTTTCTGTTGTACGTCATTAGTCTAG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:f7a6d42a8e89
|
40 | — | — | — |
|
ACCATCATACCGCATTAGGACCATAGTAGTTTAGACCGCT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:67da105f29cd
|
40 | — | — | — |
|
GCATCCCCCATCCGAACCATGACCTCAATATCTAACAAGA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:dae1f547a175
|
40 | — | — | — |
|
GCCTCACCATCCTTACCGTAACTACTGGTGTGACAGCGAT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:e8145a3c31f1
|
40 | — | — | — |
|
ATTTCCAAAATGTACGTTCGCTGATTACTTTGCATCCCGT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:84ce54d2e924
|
40 | — | — | — |
|
GGTGTGGTTGATTGAATTTATCCAAGACGCAGCGTTCACG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:f39a0057a309
|
40 | — | — | — |
|
TGACACTCGCACTATTGCTGATAATAAAGTCGAACGCACT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:9e94c888fe4a
|
40 | — | — | — |
|
TGCTTTGCATTTCGTATGTAGCCCTGGCGTTAATGTGTCA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:eebbf06c236f
|
40 | — | — | — |
|
CACTGAACGGGATGGATCCTAAGTATAGTGGCGTTGGTGT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:bc64a1093688
|
40 | — | — | — |
|
GTTTGCGCATCATTTAGTAGTCATTCCCCTAAACACATGG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:0459660b5f39
|
40 | — | — | — |
|
CGTGCCTCTTACGAACAAATGCCTTACAGTCACGGGACCG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:a21a20077f69
|
40 | — | — | — |
|
CCGCAACACAACGAGTTTCCTTCCGGTTCCAAGCCCTTTG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:2f8bbcfd913e
|
40 | — | — | — |
|
GAAATCTCCTATGCCTTTACGGTGCGTAAGAAGTTGCCAG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:ba7bfc82582b
|
40 | — | — | — |
|
GGTACCAGATTTGTAACGGCTAGTAAGCGTGTTTCAAGCA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:cc7bbda2f378
|
40 | — | — | — |
|
TAGGTATGGTAGCATTTGACGCTGACCATCAAGACCGTCG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:f012f98cab1a
|
40 | — | — | — |
|
AGAACACATACTTCAACCCGTTTTGTTTATGAGGAAATGA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:738024ad6790
|
40 | — | — | — |
|
GTCCAGTGAATGAGCCTAACTACGTGCAGACATGCGCCTA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:9b4163cbf77a
|
40 | — | — | — |
|
ACACAAAATTATCGGCGTGGAAGGGTAAATCGTAAAGAAC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:641cd6e346e5
|
40 | — | — | — |
|
GCATATTTCAGTGGCGATGTGAAACTACAGCCAGCGTTAC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:470b17c165d2
|
40 | — | — | — |
|
ATACGAATCGGTCCGTTCCACGCGGCCTTGTGAATTTGGC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:b1d2103903d6
|
40 | — | — | — |
|
TCTCCTTAAGACTTTCAATTCCGCCATTCGGACACACTCA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:aad8f4307039
|
40 | — | — | — |
|
TCTTTCTGAGTGCCGGTCCCCCCAACTGTTCATACGCGCT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:9b88dec4732b
|
40 | — | — | — |
|
GTGCAAATAACCTGTCATCCGCCAGATTCCCCCACGTCAC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:c210d2b7cefe
|
40 | — | — | — |
|
GCCCTCGTGTTACGGCACCACGAACCGCTGCCAGAGCTTT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:991af213fed4
|
40 | — | — | — |
|
TCGTTTTTTATGCAGTTAACGGCCTCTGTTATTTACGACA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:46b27a377449
|
40 | — | — | — |
|
CTACTCATTAATTGCATTAATGAGTTCGCTCTCATTGCCA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:9063ceb477f1
|
40 | — | — | — |
|
ACACCTGGTGCCCGCCACGTCTGCCCCAACCCCACGAGCC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:bb4c1ac3c508
|
40 | — | — | — |
|
TGATCTACATCTTGAAATTGAGTTGTATTATAGTAGCTAA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:5c24224a188d
|
40 | — | — | — |
|
CCACGGATTAATGAACTTGAACCTTTTGCGACAGTATCCT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:5a9a5230cbb2
|
40 | — | — | — |
|
GTGACACGGAAGGCTGTTGTTAAGCCCACATCCGGCTTTG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:4f30fb5ec605
|
40 | — | — | — |
|
CGTTATCTACTGTCCGGTCGTGGGATCCGTAAGTTGAGTG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:fd5a6e2cac4d
|
40 | — | — | — |
|
AGTGAAGCTTCATAGCGCGTGCGGGACACATAGCTCCTAA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:3ac8b809f374
|
40 | — | — | — |
|
CATGAGATCTCGAAGTACGTGTTCGAGCCCCTCTCCCCCA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:3407ede03e74
|
40 | — | — | — |
|
CATTCCCACCATGTAAGCTCTCATAAGGTGACCTCAAGCC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:08a45f9bdf42
|
40 | — | — | — |
|
GAAAACCAATCCAGATACTAGCAAGATCCTAGTATACACT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:36165b525931
|
40 | — | — | — |
|
GCATTGTAATGATGAACAATTACGATTGTTACCAGGCATG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:b4faf553fb69
|
40 | — | — | — |
|
GAGCGGAAGTATTCATCGGGTCCTCAAACGTTAGCTTCCG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:b9935062116c
|
40 | — | — | — |
|
GCGCAATTATCGCGATCCCACAATACCATTGTGCAGGTAA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:8a2c95214fe8
|
40 | — | — | — |
|
GAGACAAACGGGCACTACCTTTAGAGAGCCCAGCGTTAAC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:215a386849a4
|
40 | — | — | — |
|
TAGTTATGATGAACAATGATGCATTGTTACGTTTAATTGC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:2497fd3fdf39
|
40 | — | — | — |
|
CTGAAGCTGAGCCTAACGTTTTAATTTAGATCCTAAATGT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:7b27a0bf3297
|
40 | — | — | — |
|
ATTCACTCACTGTAAGCATTAACGAGCTCAAGTTCCTGAC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:e2839fa54543
|
40 | — | — | — |
|
ATCTTATTGTTCGGTTTGTATCACGTGTTCTGCACGTGAG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:7f764f470aba
|
40 | — | — | — |
|
TCTATATCGCTTACGGTACCTTGCGCTTGCATAGTGGGTA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:1f2a1ef4e425
|
40 | — | — | — |
|
AAACAATGTGTTATTGTTGTACCACGCGCAAGCCACATTG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:fe76a8e52616
|
40 | — | — | — |
|
ATACTGGCGTATTGTCTGCGCAAACAATGACATTGTTTGG
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:39322b1451f6
|
40 | — | — | — |
|
GATCTACAGTAATGACAATGAATATTGTGATTACCTGAGA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:01cc9c6cb06f
|
40 | — | — | — |
|
GGATTCGTAAATGACATATGAGCCCGATAGCATAGGGGTC
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:0f3e3872224a
|
40 | — | — | — |
|
ATCCGTGAGGGAATTTGCTGTTGCTACGGCCAGCGTACGA
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:1e7a70c62df9
|
40 | — | — | — |
|
ACAATGCTTCCGAGAATGGCGTACCCCCGGCAATAAATCT
PANAPTA:P31249:HOXD3_SOX11:PRJEB66722:R3:17e4ba47c870
|
40 | — | — | — |
SELEX rounds
R3 ·final