HOXD3_TBX4
CAP-SELEX sample HOXD3_TBX4; Mixture-SELEX sample HOXD3_TBX4 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GTGACGTGTGGCAGCTGCCACCTCACCTAGATAGTCATGA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:345cc5713e0f
|
40 | — | — | — |
|
CGACACGTCACCTCCCACACGACACCTCGCCTCCTGCACA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:0e3e4d692058
|
40 | — | — | — |
|
GTGACGCGACAAATGCGACACCCACTTTCGAAGTGTCCGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:995e8515362b
|
40 | — | — | — |
|
GCACACCATTAAACGCTAATCAACAGCAACGCCTCGCATG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:a137c7f50923
|
40 | — | — | — |
|
TGCCTCAAACACACGTCACCTCATTAAAGGTGTGATTTAG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:70c8b3893e81
|
40 | — | — | — |
|
ACTCACGTTACTACTAGGTGCTACTTCTCGCACCTCACCT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:2610f2eb6f71
|
40 | — | — | — |
|
ACATTGTTTACACGTCACCTAGTCATTCACACGTCACCTA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:5dae9760d527
|
40 | — | — | — |
|
GTGACGTGGCGCTTCCCACACCTTCCCAACTCGTGGACAA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:f580c9dfe1a1
|
40 | — | — | — |
|
GTGCCGCACGCACCTAATCAACACCTCACCTGCTACATGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:4b598905f5fe
|
40 | — | — | — |
|
AGGTGTCGTGTCGCAGTTGACACTTTCATTGCCAGTCGAA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:4e2843d217df
|
40 | — | — | — |
|
GCCACGCCCAAGGTGACGTGAGACAAATCGCACCCTCCCT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:98c87cfacaa6
|
40 | — | — | — |
|
CCCGTGACACGTCACCCCGATACTCACACCTCACCTCCCC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:1178ad77a19e
|
40 | — | — | — |
|
CCGCCTTATCCAACAAGGTGACGTGTGTCTTCTCACACCT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:aa2f7997fea7
|
40 | — | — | — |
|
GTGTGTGATTTTACACCACACCTTCATACAACACCTCATC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:eb25409b7f63
|
40 | — | — | — |
|
GTGTGAAATTCAGCACGTCACCTCCTCGTAACCTGCCTGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:3e6c56b19b74
|
40 | — | — | — |
|
TGTCAACCCCGACACCTCACCTTCCCTCGCAAGACCACCT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:8104da48a577
|
40 | — | — | — |
|
GTGTCGCTTTTCACGCAACACCTGCGCCCTTGTTACCTAG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:c81b86704529
|
40 | — | — | — |
|
GCTGTGACACCTCATTATCTAATGTCACACCTCAACACGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:f924cf364492
|
40 | — | — | — |
|
CACCTTCCTGAAAACGCTTCTCACACCTCATTAACACCTC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:b704e0d1068f
|
40 | — | — | — |
|
CCTCCAACACGTCACCTTCCCACGTCTTAAGTGTCGCGTG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:dd48e20fb243
|
40 | — | — | — |
|
TTAACACATCACCTCCCGAGTCACACGACACCTCTTGTGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:326e9c6b1436
|
40 | — | — | — |
|
TGACGCTTTTCGCGCGTCACCTCCTCGCTAACACCTCAGA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:3735ac010ff7
|
40 | — | — | — |
|
TGTCGCATGTCACACGCCACCTACACGTAAGTGCTCGCAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:3f4064344df6
|
40 | — | — | — |
|
CACCTCACCTCCGTCCTGACACCTCACCTTATGCCTCCCA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:1ff5980f3973
|
40 | — | — | — |
|
CTAGGCTTTACACCCAACACCTTGGCTGAGGTGTCGTGTT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:4e176d0bfb28
|
40 | — | — | — |
|
ACCACACCCTAACACCCTAACACCTCACCTTCTTCAACAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:4a9c54d64313
|
40 | — | — | — |
|
TGCCGCTAATCACACCTCACCTCGTGGCACGACCCTGGGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:5919707e59d5
|
40 | — | — | — |
|
CCCACGACACCTCACCTACAACCGTAACACCTCACCCCAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:10829788b46b
|
40 | — | — | — |
|
CAGCGACACCTCACCTCAACCTACCCACCTCACACCTACC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:1dce50803c00
|
40 | — | — | — |
|
TGTCATACGCAACACCTCACCTACGCCCTTCCACTTACCA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:c512c58623f5
|
40 | — | — | — |
|
GTGAGGTGTCAAACGCGACACTTCCCTCACCACCGCTTTC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:44c71fa90256
|
40 | — | — | — |
|
GGTTCCTGTCACCACACCTCTGAAGCGTCACCTCACCTAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:3370005b5a23
|
40 | — | — | — |
|
GCAACAACATTACATCCCTCACACCTTCGTCAAAGGTGTT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:7ef73f0c44e8
|
40 | — | — | — |
|
TGACGTGACAACTCCGACACCTCTAATACGTCCGGGCATA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:91fe475659cd
|
40 | — | — | — |
|
ATCATCAACGACACCTTCACACCTCATTAAGGTCGCACTG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:6f9a22dc525b
|
40 | — | — | — |
|
TTAGTTCACACGTCACCCAATTAAGAAGAGCAACACCTCC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:687d94fda91d
|
40 | — | — | — |
|
GTGCCGCTTTTCACACTTCACCTCATCATGTGCGGAATTT
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:a83dc8864dc9
|
40 | — | — | — |
|
CACCACAACATCACACCTCGTTAACACCTACGACATCATG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:dd1e9050f2f0
|
40 | — | — | — |
|
CATCACCTTCACCGAGGTGAAGGCCACACCTCACCTCTTC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:ea108b87031f
|
40 | — | — | — |
|
GTGTCACAGATCACACCACACCTGCACCCCGACAGCCACC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:7ae15b40bdb5
|
40 | — | — | — |
|
CCACCCTTAAGTGTAAAAAATCACACTACACCTTCGCCTA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:e9173a74a56d
|
40 | — | — | — |
|
GTGCGAAATTCCACACCTCACCTCGTGCGATAGGAATTTC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:d860bb5a056f
|
40 | — | — | — |
|
GACACCTCACCTTACGTGTGAGCCATTTCTGCCACCTAAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:c930ae2b829f
|
40 | — | — | — |
|
GTGACAAATTTCACGCCCCACCTCCCGATGTCGTACCGGC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:90bd51856131
|
40 | — | — | — |
|
GCATCACGACACCTCACCTTTCATAAGGTGTTAGAGCATA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:1ebe6e32fbd3
|
40 | — | — | — |
|
TGACGTGACACTTTTCACACCGCTACCAACGCCTTTGTAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:e977f10c2899
|
40 | — | — | — |
|
CTACCTCGCAAAGTGACGCGTCATTTATCGCACCTTACAC
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:2c9fe0c8ed32
|
40 | — | — | — |
|
GCGTGACATTTCACGCGTCACATTTCGCCGTGATGGTGTA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:cf53f2406b58
|
40 | — | — | — |
|
CGGCCCTGAGTAGGTGACGCGTGAATTCCCACGCCTCCCG
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:ed6592b4570f
|
40 | — | — | — |
|
TGGCAAATCCCACACGTCACCTCTACTCAGCGGTCCACCA
PANAPTA:P31249:HOXD3_TBX4:PRJEB66722:R3:f469ef1f73fc
|
40 | — | — | — |
SELEX rounds
R3 ·final