HOXD4_TBX4
CAP-SELEX sample HOXD4_TBX4; Mixture-SELEX sample HOXD4_TBX4 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CAGGTATGGTGAGGCGTTAAAAGTAACACGACACCTACGA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:db03ce43b702
|
40 | — | — | — |
|
TGACGTGTCGATTATAGCACGTCACCTTCTAGCTGCCCTT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:37216962887e
|
40 | — | — | — |
|
TAAAACAGGTGACGCGTCACATCTAACACTTCACCTCTAG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:2a3c59318150
|
40 | — | — | — |
|
GACAGCACTTCACACGTCACCTCATTACGACGCCATTGCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:791e0b843cbe
|
40 | — | — | — |
|
AACGGCGAGGTGATAAAAGTAACACCACACCTATGACGCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:27f90ad6ddff
|
40 | — | — | — |
|
CAAGCTCGCACCACCTGCGCATAACACGTCACCTCATTAG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:f929789fe8fc
|
40 | — | — | — |
|
GGGGGTTCACACGTAGAGGTGACGTGTTTCATTAGCGTCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:96874794495f
|
40 | — | — | — |
|
CGCCCCGTCCGCGCGACACCTCATATTCACACGTCACCTA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:0be16ca4426d
|
40 | — | — | — |
|
CCGAAATCACACGTCACCTTCCGCGACACTGCCACCTCCG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:02fe61014eb3
|
40 | — | — | — |
|
CACATTCAGCGGCACCTCACCTCATTAACACCACCTGACT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:ac779d989289
|
40 | — | — | — |
|
TCAGCCGCGACACCTCACCTAATTAACCCATGGTGTCCCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:84a7f3224c16
|
40 | — | — | — |
|
CTATGCACTTAATGAGGTGAGGTGTTAAATGAGGAACAAC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:c31c2da1bae2
|
40 | — | — | — |
|
TCGCAATCACCTCACCTATTGGTGTTAACACCTCACCTAG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:458405f60311
|
40 | — | — | — |
|
GTGGTGACAGGAGGCGACAGAACTGACACCTCACCTCAGC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:31aa49ac9780
|
40 | — | — | — |
|
CGACACGTCACCTCATTAGCACGGGGATCGACAGATAATA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:6aa6fa4b0b1f
|
40 | — | — | — |
|
GGCAAGGTGCCATAACACCTCGCGAGGTTACACCTCACCT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:e11f2afbbec0
|
40 | — | — | — |
|
AAAGTGACGCGTTAGATTTCGCACCTCGAGACAGGCGCCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:6c6117e4da13
|
40 | — | — | — |
|
CGCAAGGTGAGGTGTTTGTGAATCAATTACATGCGCGTTG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:8c4706917a27
|
40 | — | — | — |
|
CATCCACGAAGGTGACATGTCGGCACTAATGGAACACCTA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:26b1c05c5102
|
40 | — | — | — |
|
CACCCCTAATGATCGCACTTCATTAGCGCTCTCGACACCT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:84d904089838
|
40 | — | — | — |
|
AAGGCAACACCTCACCTCTGGTCACACTACACCTCCTACA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:f41307e9acd8
|
40 | — | — | — |
|
CACCACGTGAATCACACCTCATTAACACCTCCTCAGTACT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:30be7be07846
|
40 | — | — | — |
|
GATAAGACAAACCCAAGGTGTGTAAGCTCACACCTCACCT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:1e8ee906e2d3
|
40 | — | — | — |
|
AAGGTGTGAATACCAACACGACACCTTGGATACAGCACAA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:03ccd1a4af49
|
40 | — | — | — |
|
CGGTGGTACATAAGAGGTGATAGAAATAACACGACACCTG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:97adc5c14353
|
40 | — | — | — |
|
CGAGACTAACACCTCAGTCAAAGGTGTTACAGCGTACCGT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:c6586ee7360e
|
40 | — | — | — |
|
GCAACACCTTGCTACCTGGTAATGAGCCTCGCGACACCTA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:4387b83d9f6e
|
40 | — | — | — |
|
AATGTGACTCCGAGGGTGTCAACTGCCACACGTCACCTTC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:a8f64c8d9aa4
|
40 | — | — | — |
|
CAACACCTCATTATAACACAGTCACACCTCTCGCCTCACG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:155ae777354b
|
40 | — | — | — |
|
CAAAGGTGACGTGTCGCTCCGGTCATTAGTGAGCTTCATC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:2084f1802096
|
40 | — | — | — |
|
CACGCTAGATGACACCTATTCATGTTAATGAAACACGTCG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:9bdf353b8994
|
40 | — | — | — |
|
TAATCGCGTAATTGATGTTCCAACACCTACACCTACGTTG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:a9d49d16c74a
|
40 | — | — | — |
|
CGTTGTCATTACCGCCGGCACCTGATGTGAAGGTGTCACC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:7ab741da9a5c
|
40 | — | — | — |
|
TAGCGCGAACCATGTTAACACCTGACCCAAAGGTGTGACC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:37a8d2624064
|
40 | — | — | — |
|
CACCGCGCAACACCTCACCGTCAACATTTAACACGTCACC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:cbfc3b41828e
|
40 | — | — | — |
|
CACACTACACCTGAGAAAAATAGCACCTCACCTCACTATT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:d50055640e76
|
40 | — | — | — |
|
TCGCACGAACCGTAAGGTGTTGCAGCACCTCATTAACGCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:1638915bc1cf
|
40 | — | — | — |
|
GACTGCCACACCTACGACCGAGGTGTCAAACGCAAAACGA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:6da0679a3d95
|
40 | — | — | — |
|
CACTTAGGTGTGAAACCTTACTAATTAGGTGTCACTGCGC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:43a335d01b82
|
40 | — | — | — |
|
CACACCTAGAGCTGCCCTAACACCTCATTAACAGGTGTCA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:10978580b954
|
40 | — | — | — |
|
ATAGGTGCCGCGTGAGATATAACACCTCGTTCTATAGTGT
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:f1b514d57b06
|
40 | — | — | — |
|
CTTAGTTCACGCCTCACCTACAGGTGTGATCACGCCATGG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:c95c6aced60a
|
40 | — | — | — |
|
AGGTGACGTGTGATCGATTAACAGGCTAAAGGTCGACGTA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:6cc0f6e0d489
|
40 | — | — | — |
|
CCCCACACCTACACTGTCGCGTCACTAAAAACACGTCACC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:3cdafc8d1ca9
|
40 | — | — | — |
|
GTGTTGAATACGACACCTCACCTCCACGCGACGTATAGTC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:b3a3becd8c69
|
40 | — | — | — |
|
GTGGACGTGCTAATCGTTTCGCACTCACCTCTTCAACGCG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:9407311fd777
|
40 | — | — | — |
|
GTTGCGAATCGCAGCTAACACCTCGCACCTAATTAGCGAA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:7ec3f59c66eb
|
40 | — | — | — |
|
CATGAAATCACACCTCAGCTTAAGTGAGGTGTCATTACAG
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:b325fded628f
|
40 | — | — | — |
|
CGCCCAGCAGGTGTCGCGGCTGGCACCTCACCTTCACAAA
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:72a65eddc50c
|
40 | — | — | — |
|
CCGCCAACAGGACGTGGCGCGTCAGTAGCGACACGTCACC
PANAPTA:P09016:HOXD4_TBX4:PRJEB66722:R3:b5acd79081d0
|
40 | — | — | — |
SELEX rounds
R3 ·final