HOXD8_MAFF
CAP-SELEX sample MAFF_HOXD8 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCCCTTAGCGCGACCAAAGGAGCCCGCTGTTAAGGTACAT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:9ab8dd869ea9
|
40 | — | — | — |
|
AATTACACGACTCGGGTAACGTACTGAAAGTGGACCGTTA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:df009854c929
|
40 | — | — | — |
|
ACCACATACGTAGTGAACTGGACCGTATGACGACGAGTGG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:c3b4d150cf1e
|
40 | — | — | — |
|
TTCTATAATCATAGGCTAGGAGCGTTATGATCATCACACA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:656c2b5e1529
|
40 | — | — | — |
|
ACGACGACTTAATAGGTGACCGTTATTAAGTGCATCTGTG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:8b8ef5e61f50
|
40 | — | — | — |
|
GACAGTTCTCGGGCACGAGTATAATACCATTCTCGATGTC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:ad4a51da57ae
|
40 | — | — | — |
|
GCATTATCTAGCCCTGACTAATTATGCAGATGCGCTCCAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:d12a4e51e8c3
|
40 | — | — | — |
|
TGGTATCAGGAATGAAATGAAGCCTGATAAGCTATTGGAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:8e15074d770e
|
40 | — | — | — |
|
TAAGTGCAATAGGTACACGTTATTGCCCAACCAGGCAGTG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:04276c51b517
|
40 | — | — | — |
|
CGAAATCATGAGTTATAGGCTATGCGTTATAACCCGAGTT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:70c65a0f5b74
|
40 | — | — | — |
|
ATTCATTTAATTACAGTTCTGTTCCACAAAGGTAATTAAC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:5a6ae87ba31a
|
40 | — | — | — |
|
GGGCTAGGCAGAGAGCGTTATAGGCGTCCCGTTATAAGCT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:5818cde1ae0e
|
40 | — | — | — |
|
AGTTAATGACCAAAGGCACTTCACGCCGCGTCATCACCCG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:95a69802059f
|
40 | — | — | — |
|
AACTTAGTCCGCCCCATTGTAATAACACCCAATTACCCAG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:a6b4c4d025b0
|
40 | — | — | — |
|
GCTTATGCATAGGTTTTACCGCATAAGGCAAACGCATGAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:852649d23f16
|
40 | — | — | — |
|
TAAGTAGCGTTTAGCAGGCAACAACGATGGAACCTTAACC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:73f5478e5e39
|
40 | — | — | — |
|
CACCATCTCCGCTTATGCGTAGAAGCTATGCGTCGCCACT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:66967ff9440d
|
40 | — | — | — |
|
ATTTATTGCAAAGCAATTAAGGTGCTTAATTGACTTTGTC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:dfbb3e41dddd
|
40 | — | — | — |
|
GGTAACCGAGGAAATAGCCAATTGAGGCCTCGTTATGCTA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:cbcaf3039142
|
40 | — | — | — |
|
CCAACGATGCGCATAACCATTCGAAGAGCGAATGGCGTGG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:8cbc3b666984
|
40 | — | — | — |
|
CCCATCGGTAATAAATTCCATTCGTACATTTATTTTAGAC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:b2942c698413
|
40 | — | — | — |
|
AGCTAAATGTATATTGGAAAGTGATGACATTAGCTGAATG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:4ac7fa2c8137
|
40 | — | — | — |
|
AGACGCTCTTAATAGCTATTAAAAACGAAAGCTATTAAAT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:db5e34ebfb66
|
40 | — | — | — |
|
CTTGTTACATACCCCGCACTCAACCCAAGACTTATCTCGA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:1a6676bf210c
|
40 | — | — | — |
|
GGACGCACAAAAATTGCATATTCATCATTTCTACCCTACC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:4d9157e2614b
|
40 | — | — | — |
|
GCACCATAGGTTCAATTCGTTATGGTCCCATACAACGTTG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:7310e9882b69
|
40 | — | — | — |
|
TAGACCGCCCACGAACGGTATGGTACGCCCGTCATAATGT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:63cce4e929f4
|
40 | — | — | — |
|
GAATACCGGCCAATCACGCGTGACTGCGTCAGCATTTACA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:001d32274031
|
40 | — | — | — |
|
TGAATGCACAGGCAATTAATGAGCAATACTTAATTGCCTC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:7af0e6a3bbe6
|
40 | — | — | — |
|
TGCGCGTCCCCGGAACACGTCCATACCCCATGTAAACTAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:d06497b3d7b8
|
40 | — | — | — |
|
GATAATGAGGGAAGACTTAGTGCATTTTTGGCCGTTGCTG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:e88eefbcc5f2
|
40 | — | — | — |
|
ATAATGCATCTGATGATCTCCCTGCATATTTAACGTGCGT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:839475dc4ad1
|
40 | — | — | — |
|
GGCCCGCCCTCAGCTTGAAAGCACGCCCGAACACCCGTTT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:ab8a7edef6d3
|
40 | — | — | — |
|
GTTAATTGCCCGATAAACGGTTTAGCAATTAATGCCGAAT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:d586c45ea22d
|
40 | — | — | — |
|
GCGTCTTAATTAGCTACGTTGCAAATTAAGCAATTATTGA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:d60804b75747
|
40 | — | — | — |
|
GGCGTATAACGACACTCAAATACAAACGTTGGTCGTTATA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:db63d7d8f657
|
40 | — | — | — |
|
TAATTATCATACTAATTAATCAACAAATCGTTGGCTACGG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:f63eded85b4a
|
40 | — | — | — |
|
TGCGAACTCTCAACGCCACCACAACCAGAAAGGCTACTCA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:3beb3182bc5e
|
40 | — | — | — |
|
ACGGATTAGGAATAGTAATGAGGCCAAATTCATACATCGC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:f0380765db0a
|
40 | — | — | — |
|
CGCCTAGTAAGATACAACGAATAGAATGAGACATTGTAAG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:d999ab8c1190
|
40 | — | — | — |
|
TGTGCGACCAACGCCGAACACCTAGCCGATAATCCATAAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:85e1f84393a7
|
40 | — | — | — |
|
ATCTACGTAGCCAGTGCTAGAAGTTATCACTCAGCAATCC
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:057a5d940b5d
|
40 | — | — | — |
|
GCGGCTTGCAAACGTAGGTCACTACGTCACTGAGACTGAA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:357355a2f55f
|
40 | — | — | — |
|
TATGCCCGAGGGGTACTTAATTAGGGCCAGACTAATTAAG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:598b9a7eb4fa
|
40 | — | — | — |
|
AACGTCGTCGCGTTAATTAGCAATAATTGACTAATTAACA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:206a2de68eee
|
40 | — | — | — |
|
CGGTGCTAATTGCCGGCTACACTAAGCAAGAAGGCAATTA
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:056dc05caa2f
|
40 | — | — | — |
|
GTCAATAAGGGGCGCAGTTTGTGTTGCGGTGAATAACTAG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:3ab03a2141cc
|
40 | — | — | — |
|
ATAATTAGTTCGCATTCACCCTAATTACGTCTGTTTAATG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:a775ac9601f7
|
40 | — | — | — |
|
CTGTTGCCCCTTATGCTGCAATTAATACGGCATATTAATT
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:b841d3e2555d
|
40 | — | — | — |
|
GCACTGTACCTGACAGGTGGCAGTGCTGGGCGCGAAACAG
PANAPTA:P13378:HOXD8_MAFF:PRJEB66722:R3:7a6599af8e4b
|
40 | — | — | — |
SELEX rounds
R3 ·final