HOXD8_NHLH1
CAP-SELEX sample NHLH1_HOXD8 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TGGGACAGACGATTGCGATGAAGTAAGACCCTAATTAACT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:0742751775f0
|
40 | — | — | — |
|
AAATTGTATTACACTATTAATCACCTTTCTTTGGTAGTAC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:354ce3f47204
|
40 | — | — | — |
|
TTAATAAAGCAAATCCTATCGTCCTCAACGATTACGACAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:26b2b99f34b7
|
40 | — | — | — |
|
CTCATTACATTAGAACACTGAACCGAGTTCTACCGTGCAT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:bd9f1ade51eb
|
40 | — | — | — |
|
ATTATGTGTTAATGGCTCATGCTGATAAAGGCCATTAACT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:417f0e46f68c
|
40 | — | — | — |
|
TGATCAAAGGGATAACTCTAATCGATACGCCGTTTTGCGC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:a1f211e3930a
|
40 | — | — | — |
|
GCAACAGCCAACGTACCTTAACTAAAAATGCCATAAACGC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:24122959886e
|
40 | — | — | — |
|
TGTCCAAAACATTTTAACTCCCAAAAATATAGACCTAATG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:bceb6c6b1f39
|
40 | — | — | — |
|
TACCATAAATATTCTATACATGTAGATATGAAGTAAATAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:2a85f5fa0901
|
40 | — | — | — |
|
CTTCACGGGGAAATAGAAAAAATTACCGTTGGGCGATGAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:aea61e1639bd
|
40 | — | — | — |
|
CGGAAATAAGTACCGTAATTAACGCGACCTCGATAATTAC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:a6654e13b993
|
40 | — | — | — |
|
CGACGGGCGCGCGTGGCACCGCTAACTAGTAAATGCGATG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:d8a7eaa5a31e
|
40 | — | — | — |
|
ATGCACCTCCAAACGCGCCCCTAACAACTAATGAGAACCA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:7bc3179768e9
|
40 | — | — | — |
|
AAAAAAAATTACGTTGTGAAGCTGTATACGAGCGATCGGA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:dca79dfc4ad0
|
40 | — | — | — |
|
ACGATTGAACGGCCGAGAAAATCGGCACGCCATAGAGGAC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:104b673dc05e
|
40 | — | — | — |
|
TTGTTGAGAGGTACTACTGTAGTTGATGATGAAGGGATAT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:9b8112d4a9ba
|
40 | — | — | — |
|
TGCTAGATGAAAGTGATGCAGCGCTGCTTGAGTAGAAAAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:4c10507c5c74
|
40 | — | — | — |
|
CTTTACGGTCTCCTTTAAGACTTTGCTAACAATTATTACA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:59b076d049c1
|
40 | — | — | — |
|
CTAGATTAGACGAATGCCTGCACGAAGGCCGGTTGTTTTG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:11593630ecc0
|
40 | — | — | — |
|
GTAATGTCCTTAGCGAGAGGTACCCATACAACTGAACGTC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:834686bd857e
|
40 | — | — | — |
|
GCGCGGAAACTCACGTGAACTCACAGAATGAGGACGCCTC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:a3d60ab18691
|
40 | — | — | — |
|
AATACACGGATCGGACCTCCAGCATGTCGAGCACGGACGG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:ec7215c66bc9
|
40 | — | — | — |
|
TTCTAATAAGAATGTCCATGACCCTGGGAACGTTACTACC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:835a8abb1e21
|
40 | — | — | — |
|
CATAGGACTTATAAGGCAATACGTTACAAGGTTATTGCCA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:46cfb9d10f93
|
40 | — | — | — |
|
GCCTTCCTAAGTTTACCGAACATCTAGCGAGACGCAATAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:7a3c13e37c79
|
40 | — | — | — |
|
ATTATACTTCAAGATAGACGTACCTGCATCCGGCAAAACT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:5da72484e21d
|
40 | — | — | — |
|
ATATACACCCACCCGCTCATGAACCATTAAGTGGAAACGA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:3c386fc0be47
|
40 | — | — | — |
|
AAGTGACCACAGCTTCCCGTAGCAGACGCCCACCTCATTA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:2056f452fc08
|
40 | — | — | — |
|
AAAGCATAATTAACACAATACGTTAATTACGCACCCAGCC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:a720895c9af6
|
40 | — | — | — |
|
AATCGCCTAACACGATTGCCAACTGTCGAAACGGCCAAAA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:5c5ab19c1a75
|
40 | — | — | — |
|
GCATATGGAAAACCTCCCTGTCGCAGGAATAGGCGGAAAC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:d60bb764d40d
|
40 | — | — | — |
|
GAAATTACCATACGTGTAAGGTTATGGTTAGTCACAGTAG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:b77b14f57efd
|
40 | — | — | — |
|
AAGACCATTCGTTCAAACATCAATTGACGAGCCCCCTCGT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:4357df004b73
|
40 | — | — | — |
|
GAATGGGAGAAGCTGACTGGGAAGGCCTAACCGTAAGGCA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:012c75592932
|
40 | — | — | — |
|
GTGCTGTTCGGGTAATTACAAGGCGGACTACATACTACAT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:17268c274f10
|
40 | — | — | — |
|
GCCATTAACAACTCCTTAATGGCCCTACGTCCACTTCTAG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:c6ed7b432a33
|
40 | — | — | — |
|
AAATTCAATCCGTTGATGACTGACGAAGTCTAATAATCAT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:b1332e0c1434
|
40 | — | — | — |
|
AGTTATGAAGACTCATGCATTGACGCAATTGATACCCAGG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:83938e913ad8
|
40 | — | — | — |
|
CGCACTGATCAAAACATCAGCCCTAGCCTTCCCGTGGTCC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:bf4f08a7a9c6
|
40 | — | — | — |
|
TAATTGCTGCGCGCTTACCTCGCTGTGAAAGCAATTATCT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:4d88bb52bbc0
|
40 | — | — | — |
|
ACGATGTTGACTACACATAGGCTAGGTGGCGTTATGTGGA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:1fb22a517983
|
40 | — | — | — |
|
TACGCACCTTAGTATCATTATGTAACGTGGCCCATGAAGA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:fcb79bfb4a23
|
40 | — | — | — |
|
CGACACATCCGACGCGAGAAATCACCGGTGAACGTACAGA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:a29db88dbc71
|
40 | — | — | — |
|
GTCGAAGGACAGTGTCGGATGAGACCACCATCTCGACAGG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:54a85d7a9925
|
40 | — | — | — |
|
GCATCGGCACGGTGTGGCCCAGACTGCCACCTTCGGAACC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:d9e9bdfb06a2
|
40 | — | — | — |
|
GCGAGCATAGCCCTACCCCTACTACTGGGGGCAGCATTCT
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:8e9a616cd96e
|
40 | — | — | — |
|
ACGCTAGGGTGACCGAAAATGATCTTATCTTTCTACATGC
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:ca032a795d91
|
40 | — | — | — |
|
CGCCACATCCGTACAAGGACGCACGCGACGATGTACCCTA
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:8e90df56feec
|
40 | — | — | — |
|
ATGCTATCTTCTAACAAGAGGCCTACCAGTACAGTTAGCG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:fae63dd525f6
|
40 | — | — | — |
|
ACGTAGAAGAGCATCCCAACGACGTATAACCGCCTCCCAG
PANAPTA:P13378:HOXD8_NHLH1:PRJEB66722:R3:9ca3e5c6e0f3
|
40 | — | — | — |
SELEX rounds
R3 ·final