HOXD9_ONECUT1
CAP-SELEX sample HOXD9_ONECUT1; Mixture-SELEX sample HOXD9_ONECUT1 · 3 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGTAAAAATCGATGAGATTTTATTGATTAACTGCGATCTA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:bcbc8fe5a245
|
40 | — | — | — |
|
GTAACGATTTATCGATCGTAATAACTGATAATCGATAGTA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:3d2d06e8ba5e
|
40 | — | — | — |
|
ATTAACCATCCTACGATCAATACCTTTTATCGATCACATA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:1b03dac1c767
|
40 | — | — | — |
|
GACCCGCGATCGATACAAGACATCATCTATCGATCGCAAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:02690f50299f
|
40 | — | — | — |
|
GCATTAATGGATCGATTTTTATCGATTAATGCCTTTTACC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:e9b208cf5f30
|
40 | — | — | — |
|
AGTCGATAATATCGATCGTCCATTCGATTATCGATTGCTC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:9e4c4ffee4e9
|
40 | — | — | — |
|
ACACTCCCTGCCTAGATCGATATTTATTGATGTGATCAAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:8efa74ba2f9d
|
40 | — | — | — |
|
ACGCTGGTAATTACTTTATTGATCCAAATCGATCAATAAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:0af4423f2de3
|
40 | — | — | — |
|
CCTATAATAACGTAAAATTGTATTGATTTATCGATTTACT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:3b2b41acb5e8
|
40 | — | — | — |
|
GCATTAAGTAGGACCGATCGATCGCCACCAATTATCGATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:36f583b8e764
|
40 | — | — | — |
|
TGCCGAATCGATAAAAAAACCCATAAAATCGATACATCCG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:58f0ede6bf87
|
40 | — | — | — |
|
ATCCCGTGAATAATCAATAAATCGATATAGTTCCCATTAC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:7bc10aea1054
|
40 | — | — | — |
|
ACACGACGATCGATCGCAGGTATCGATCCAAACGAGTTTG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:e3f88ce9b5bc
|
40 | — | — | — |
|
AACCATCCACATATCGTTACCCGATCAATAAATCGATCGA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:31e28df2fe08
|
40 | — | — | — |
|
TGAACAATCGATATATTGATCTACAACACAATCCACATCT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:cb0c2b480b35
|
40 | — | — | — |
|
TATCGATTGATGATAAAAATCGATCAGTCGCAATAAAATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:9466112906f2
|
40 | — | — | — |
|
ACAAATCGATATATCGACCATTTTATATGCTCTCCTAATG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:8d0aeb0cbf52
|
40 | — | — | — |
|
ATATTAATCGATCCGCCCGCTTGTTACCCATCGATCGATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:03c13b2a37eb
|
40 | — | — | — |
|
GGTTGTAAATATCGATTTATCTTTGCTGCACCATCGATCG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:de8284331bef
|
40 | — | — | — |
|
CTATTGATGTGTGATCGATCGTCCCATGTCTGCGATCGAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:f60e91d765a4
|
40 | — | — | — |
|
TTATACTTATCGATCAATACTCCCTAATTTATCGATTAAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:a2fc6abcc579
|
40 | — | — | — |
|
ATCAAAATTCAATCGATGACTATAATACTTAACGATCGAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:877bd8702914
|
40 | — | — | — |
|
CCCAAGGATCGATCGATAAGATATCGATCCCGTCACCACC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:fb1236643c7f
|
40 | — | — | — |
|
GACTTAGACAAAATCGATACAATATCGATTTGTCAAGCAC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:c28e0b76e292
|
40 | — | — | — |
|
TCCCCGCGATCGATAATAATTAGAAATCAATACCCACCGC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:9297900db7ce
|
40 | — | — | — |
|
CATCGATTAATTAGCTATTAACTATCCAGTGAAAATCGAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:eda440bbe50c
|
40 | — | — | — |
|
GTGAATCTTAATATATATCGATTAATCGATCGATAATTCG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:32526d29a183
|
40 | — | — | — |
|
AGTATCGATTTAATCATTACTGTCGATCGATATCACCCGC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:ed400e2f8060
|
40 | — | — | — |
|
CTTTACAGATAAATCGATAAATCGATTTGTTACCTACCAC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:dc6e499cc175
|
40 | — | — | — |
|
ATTCTACGATCATCGATTTTATCGATCGCATTGTCATCAT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:d31c7cae933d
|
40 | — | — | — |
|
ATTATCGATCAACACAGATCAATATTGAGCACCCTTAATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:52ccc0f8f614
|
40 | — | — | — |
|
CGCCAACCAAAGCAACAAACAGATCGATAAAATCGATAAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:181241d56e44
|
40 | — | — | — |
|
GTTCCTTCTAACCAATCAATATTTGCTATCGATTAACGCC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:790039eb4d39
|
40 | — | — | — |
|
ATTATCGATCGTTCCCATACTATCGATCGACGATCAGTTA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:f967ced14064
|
40 | — | — | — |
|
ACCAATATGTACCAATTATAATCGATCGCTAAATCGATAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:b6f20dfff68f
|
40 | — | — | — |
|
GACCTAATTGCGTTTAACGATCGATCCATTCCAATCAATA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:f99aac442875
|
40 | — | — | — |
|
GTAATCACCAAAATCGATTATACCATAAGGCAGATCGATA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:bcfcdc2ffc09
|
40 | — | — | — |
|
GGGACCCGTCCCCCCGTCCACGATCGATGTATCGATCCGT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:58cd99b829a3
|
40 | — | — | — |
|
TGCATCGATCCAAAAATCAATAACCCCATCACACATAAAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:719f380cd3da
|
40 | — | — | — |
|
AATCCGTACCCGCCACCAATCGATAAATCGATGCGCACTT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:086da5d06e46
|
40 | — | — | — |
|
ATAAATCCCTTCCAGACTAATCGATTGTTAATATTGATTA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:121f06fbf024
|
40 | — | — | — |
|
GCAATATACAATCAATAAATATTGATCCTACACCCAAATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:e620d4338f18
|
40 | — | — | — |
|
TGCGAATGATCAATAAATCGATCTCGTAGATCAATAATAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:cfdbbcfca89d
|
40 | — | — | — |
|
TTTTACGCACAATCGATATCTACCTAAAATCGATCAATTC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:16ea7d5736cf
|
40 | — | — | — |
|
GATTCTGTCCAGATTAATCGATACGATCGATCGGAACATT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:d803f1e6dab2
|
40 | — | — | — |
|
TATCGATCCATCAACCTGTTATTGATCCAAATTACGGAAA
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:8aa3b993b12a
|
40 | — | — | — |
|
AAAACCAATCCAAAAATCGATACGCTAATCGATATACGTT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:176e337956ad
|
40 | — | — | — |
|
AGTCGCAAGGATAATCGATATATCGGGCCGATATCGATCC
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:899a2640a29d
|
40 | — | — | — |
|
AGAGTGGCGTTATCGATTGATATCGATTAATCAACTTACG
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:bbe9af346acc
|
40 | — | — | — |
|
TACTTTATTGGAAATCGATTTTTATGTACACACTAAAGTT
PANAPTA:P28356:HOXD9_ONECUT1:PRJEB66722:R3:1cd1321f72eb
|
40 | — | — | — |
SELEX rounds
R3 ·final