HOXD9_POU4F2
CAP-SELEX sample HOXD9_POU4F2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GCTCAGACCATTGCCGTTTCATGCATAATTAATGTGCACC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:ade5cf1db4c1
|
40 | — | — | — |
|
CTATAGGCACGTCCATGCATTATTAATGAGGCCTCATCGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:4b038f949fe9
|
40 | — | — | — |
|
AAGCTCGCTATGCATTATTAATCAGGTACGTCACGCGCGT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:3cf9eeda7192
|
40 | — | — | — |
|
GTACGCCTCATTAATTATGCATCGCCCCTCCCGTCTACTC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:53b8f0004bac
|
40 | — | — | — |
|
CGACTTACCTTGCGGCACCGTCATTAATTATTCATGTGCT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:e4417fdfacba
|
40 | — | — | — |
|
GCGTCATGCATAATTAATCAGCTCGCCTCACTCACCGCCT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:37d484bc4661
|
40 | — | — | — |
|
GGTCCATCCATGCATAATTAATGCGCCAAACAGTGCCTGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:84e650f90e99
|
40 | — | — | — |
|
GACGCACACTACCGCATTAATTATTCATCAGCCTTGCATG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:a4354fbfa15b
|
40 | — | — | — |
|
GATTGCGTCCCTCATTAATTATTCATGTGGTTATTCGACA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:16d43ec18cbc
|
40 | — | — | — |
|
GTTCCTCACCCCATTGAATAATTGATGAGTTGTCAACCAC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:5106ee68642f
|
40 | — | — | — |
|
CCACCCAACGCCCGCATGAATAATTGATTACACCGCTGCG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:19bb38cd2296
|
40 | — | — | — |
|
CCTTCTGTTCGCATTAATTATTCATCACCGCATGCACCTC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:cadf1bbd029c
|
40 | — | — | — |
|
AACAACCAATGCGCTCTACCCGCATTAATTATGCATACAC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:b85bf4da8663
|
40 | — | — | — |
|
CCGACACCACGTGCGGGCCACGACCCATTAATTATGCATA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:dde96254ff92
|
40 | — | — | — |
|
ACATTAATTATGCAGAACGCACATGACTGCGTACCCCCCT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:01ead8cd0576
|
40 | — | — | — |
|
GACCAGAGAACATCAATATCACATCAATTATGCATGACAG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:be493f156365
|
40 | — | — | — |
|
TGCACATGCGCCCCCTCATGAATAATTAATGCGCTTCGAT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:a71bbe60ec88
|
40 | — | — | — |
|
AGCCAATCGATCATTAATTATTCACTAGCACTTGTAGCGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:0f2c772e08e5
|
40 | — | — | — |
|
GTCATGCATAATTAATGTTGCATTTTGCATCGATACCTGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:f729cbfff4a1
|
40 | — | — | — |
|
CCACCCGTGTCACGCATAAATTATTCATCATGCCGTGCGT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:c200e8647771
|
40 | — | — | — |
|
ACCCCGATGCATAATTGATGACCGTAACGCGCCTCCTACT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:e33c7bae503c
|
40 | — | — | — |
|
CTTATGCATAATTGATGAGAACATTAGAACATCGTTGTGT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:fec0206dc0f6
|
40 | — | — | — |
|
TCCTCATTAATAATGCATGATGCACACTAGCCTATGCCCC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:b68008257125
|
40 | — | — | — |
|
TTCCGCCAACCAACGCATAAATTATTCACGAGTGCCGTGA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:967f286a5d24
|
40 | — | — | — |
|
ACCGTCGCAGCCCATTAATTATTCATACCCTAAGCGTGTT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:7fac9c85abec
|
40 | — | — | — |
|
ACCTGCTCCCCATGCATAATTAACCATGTTCCGTCACGGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:fada45180198
|
40 | — | — | — |
|
TAAGCGTCATGCATAATTGATGACGTAAAGTACGCTCCAA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:d2650bd49f89
|
40 | — | — | — |
|
CAACTTTAGTGTCATTGCCATTAATTATTCATGACCCGCA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:db1f2200f33d
|
40 | — | — | — |
|
CATGCCTTCCTTCGGCCGTGTCACGCATTAATTATGCATG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:b633e7ea205e
|
40 | — | — | — |
|
ATCGTGGTGCGCCCTCATTAATAATGCATGACAACCGCCG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:3364e6055674
|
40 | — | — | — |
|
GCCCAACCCTCATCAATTATTCACAACCCTCACCCATCCT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:6d300c1f1cb0
|
40 | — | — | — |
|
GCTGCTCCTCATCAATTATTAATGATACGTTGCTCTTCGG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:907220d42f97
|
40 | — | — | — |
|
TACTGCTGCAAGACCAATCCCATTAATTATTCATGTGCAC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:d3b1d325390e
|
40 | — | — | — |
|
ATGTAGCGCATTAAATATTCATGACATCATACGCATGCGA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:10c119fb1b82
|
40 | — | — | — |
|
TAACCCCTCATGCATAATTAATGCGCTAAACGACTCGGCG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:264d66e90a89
|
40 | — | — | — |
|
CATCCCGTCATTTATGGCACACCTGCATTATTAATGATGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:bc69b10ecc9c
|
40 | — | — | — |
|
ACACATCAATTATTCATTGGCGCGCACCATTGTGTCGTTA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:e4cc54a9cf78
|
40 | — | — | — |
|
AACACCACCATTAATTATGCATGCTACGTACCTCCTCGCA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:3ed80bd2ff3d
|
40 | — | — | — |
|
GCGACGGATAGCTGATTAATTATTCATGTACTACCGCCCT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:e153fbbaf483
|
40 | — | — | — |
|
CATAAATTATTCACGAGTGCCGTATTCCCCTTGAGCTTGC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:f1d6ab2b6bbb
|
40 | — | — | — |
|
CGAATCCGATTAATCAATTATTCATGCACCTCAGTCCCGT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:c2ebdaf9784b
|
40 | — | — | — |
|
CCATGCATAATTAATGCCCCTTGACGAGGTGGACTTGTGA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:40196c187bba
|
40 | — | — | — |
|
GCCACGCCTAACGTACCCTGCTGCACATCAATTATGCATG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:07968c97eb93
|
40 | — | — | — |
|
CATTAATTATTCATCCCGTTGCGCAGCACCGCTGATATGT
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:f3ebc3eee04a
|
40 | — | — | — |
|
GCCTCATTAATAATGCACAATCAACACGGTGCCGCTGACC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:cdba911cbbdb
|
40 | — | — | — |
|
TGAAGGCATTAATAATTCATGAGCTACGCGGTTGCGTGGG
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:2d14019d1305
|
40 | — | — | — |
|
CGTGCATCGCATTAATTATTCATACGCAAACCTTGCGCCA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:cc7ced7d0230
|
40 | — | — | — |
|
CCAACACATCTCATTAATAATGCAAGGTACTTAGGCTAAC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:29f670b1ded2
|
40 | — | — | — |
|
GAATATGATACGATCGACATTAATTATTCATCCTCCTGCC
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:977631816d2b
|
40 | — | — | — |
|
ATGCATAATTGATGCACATTTTTTATCCATGCCGTACCGA
PANAPTA:P28356:HOXD9_POU4F2:PRJEB66722:R3:e87ff084dd5e
|
40 | — | — | — |
SELEX rounds
R3 ·final