HOXD9_SOX11
CAP-SELEX sample HOXD9_SOX11 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TAGATCATGCATTAGGTCCATAGGCAAACTGACTCTGCCT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:515613ca3c14
|
40 | — | — | — |
|
ATCGATGGCGAAAACGCTTATACAAAATGGAACCGATTGA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:36a8dc69e280
|
40 | — | — | — |
|
TCCTGCCATACCCATCGACCAGTCAATACCTCAATTAAGG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:8e605d2c0afd
|
40 | — | — | — |
|
TCGAAGTTCATTGCATAAATAATGTCCTAGTGTAACAGTT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:fe9584058a56
|
40 | — | — | — |
|
CACCCGTTAAACGATTTCGCCAACGATAATGATATATCTA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:074778c1b02b
|
40 | — | — | — |
|
TATGCCAACCTATTTAAACCCTCTCCGACCCTGCGTTCGC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:58c0a3c21b9d
|
40 | — | — | — |
|
TCTGGCGTCCATATGATAGTGATGAGCTCTATTAGTTCAC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:8f2c917db5bf
|
40 | — | — | — |
|
CCGCACATTACGACACCGAACAATAGTCGTAAAACGTCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:efb05d587262
|
40 | — | — | — |
|
AACTTACTTAACCTCATTGTAATCTTAACCGCCACCCTGA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:608bb0b5d0ee
|
40 | — | — | — |
|
TTGCATACTTGCTAAGCTTTATCGCACTTTTACGACCCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:589455b4dbce
|
40 | — | — | — |
|
AGGCCCAATGGAGCACTGCCTGTTACCGCTTCAACCCCGT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:6c0457428312
|
40 | — | — | — |
|
CAGACGTCAATCGTAACAATGCCTCATTGTTTACGACTGC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:a56a23be2e96
|
40 | — | — | — |
|
TTCTTTTTCTTTGCAGCGTACTGAGCAAATCACTTGTGTG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:d7c70d797436
|
40 | — | — | — |
|
TCATCAACTGGCAGCGGAAGGAAAGCAACTAGCGCTTACT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:2aa4bfe847f5
|
40 | — | — | — |
|
CAACGTGCCAAAAAGAGCAATTAACGATTTAACGTTCCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:d62bd6d048dc
|
40 | — | — | — |
|
TACGTATCATCTTTTTAACAACACAACTGGGTTCTTCTAA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:2880a37910c0
|
40 | — | — | — |
|
ACTATATGTAAAGGTACATTGAATCAACATCACCGTCTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:caa77e146523
|
40 | — | — | — |
|
CGCGAACAATATGGCATTGTTCGTGGCACGCGGCAAGGGA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:12e6dd1ac980
|
40 | — | — | — |
|
AAAAGCTTTATGCAAGTAGAGCGACCATTTTACGATCTTT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:027571d6db9b
|
40 | — | — | — |
|
TGACTACCCGCATTAGATATTTATAGATTCGAGCTTAGAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:03df19068274
|
40 | — | — | — |
|
GTCCCGCCCCGGCGAACTAACCGCGTTGAAGACATGACCC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:61e9294be467
|
40 | — | — | — |
|
GACGTATGTGAAAGAGGCTATAATTGCATTGTAGCAGCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:0876c4a906e5
|
40 | — | — | — |
|
CTGTTGTCGTTGAAACAATGGTTATTGTTTTGTTTACGGC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:6bc63c6b2f78
|
40 | — | — | — |
|
AGGTACGATTCTAAAGTTACCATGCTCTCCCAAGGAAACA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:96dab220f5ca
|
40 | — | — | — |
|
GCTTTCAACATTCACTAACAATGTCATTGTTGTGATCAAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:33a6dfe0069d
|
40 | — | — | — |
|
TGCGCCATTAACTCGTAGGCAAACATAATGCATTGTTTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:8d356255b884
|
40 | — | — | — |
|
CCTGGTGATAGTGTACGTGCAAACAATTACATTGTTTAAG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:001aaf637f76
|
40 | — | — | — |
|
CACCGGAACAAACAGGTGTGTTGCGGTGCCGATCACGTAC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:4bca89fcdef4
|
40 | — | — | — |
|
CCCGAGCTCTTCACGATAAACGAGAATTTGAGACGCGTCC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:6eec28ac1a4d
|
40 | — | — | — |
|
CGAACGCAAATACATGTGAAACAATAACATTGTTGCCAAG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:771ea9d50a30
|
40 | — | — | — |
|
CGGAACAATTACATTGTTCGAGTTAGACCTTGATACGTGG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:678abd2b9c68
|
40 | — | — | — |
|
AGTATCATTTTCAGTGACACAACAATGACATTGTTTGTCA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:7de7c0b91581
|
40 | — | — | — |
|
GTGAATTGTGTGCCCTGACACAATGAGCAATCAGACCCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:a5531d2cd359
|
40 | — | — | — |
|
TACTCAGGAAGTTCTTTTCGCGTACCAACTAGGGGACCTA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:3f5ebff61128
|
40 | — | — | — |
|
TGACACGTGTGAGACATTGTTCTCATCATTTTATGGCTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:54f980894d61
|
40 | — | — | — |
|
ATTACATGTACGCGTGTGACCCACACAATAGCATTGTGAG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:b6335b6e3b56
|
40 | — | — | — |
|
GCCGTGCACTCAACGTAACAAACAACTATTTACGACCCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:186536fe333d
|
40 | — | — | — |
|
AGGCGCACTGTAGGGTACGGACAATGTTATTGTCTCCGAG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:21329207babe
|
40 | — | — | — |
|
GCCCACGCGACATTGTGGCTATTGCACAATTGCACCCCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:4aa3dba358fc
|
40 | — | — | — |
|
ATTGAACTGAACAACAATTTCATTGTTATGCACGACCTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:90d50cef6a6f
|
40 | — | — | — |
|
TTAACGTCGTAAAAAGAGTAACAAAGCTATTGTGCCTCAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:2ab2428697c4
|
40 | — | — | — |
|
AGGAACGGCCTTTACGCAATAATAGCATTATTGCGCAACA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:21f251c8c7ae
|
40 | — | — | — |
|
CAAAGTAATGACATAACAATGAGCAATGTTACGTAGCCAG
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:94f267df34a8
|
40 | — | — | — |
|
TCACTTCCCTCACCCGCTCGGACAATGCACATTGTCCAGT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:08526372a573
|
40 | — | — | — |
|
CGCGAACATCTCAAGACAATGACGCAATTAACAATGTTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:82e45171adbf
|
40 | — | — | — |
|
AAGTGAACAATTAGACGTAAACAATGGTAATTAAACACAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:e1696abdbcbd
|
40 | — | — | — |
|
CGGAACAATGACATTGTTCGGCATTCCCAACTATGCCTGC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:b1c61a60008b
|
40 | — | — | — |
|
AAGCATTTTATGGCCATTGTTACGATCCCTAACAATACTC
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:500637935a3e
|
40 | — | — | — |
|
CATGAGGTAATGTGAACAATGGTATAGTTACGAAGGACGA
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:6fd0bd4cfadf
|
40 | — | — | — |
|
CACGCATAAACACAGGCAACAATGGAGACATAATTGCTAT
PANAPTA:P28356:HOXD9_SOX11:PRJEB66722:R3:f553371d30b2
|
40 | — | — | — |
SELEX rounds
R3 ·final