HOXD9_TBX21
CAP-SELEX sample HOXD9_TBX21; Mixture-SELEX sample HOXD9_TBX21 · 2 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TACACGTGGCAAAGGTGTGAATTGCACATGACACTTCGAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:39d9b3da7664
|
40 | — | — | — |
|
ATACAAAGGTGTCGCCAAGGTCTCACACCTTTGCATGTAA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:96da2b6786b2
|
40 | — | — | — |
|
GACACGACACTTGGCCTGCAGAGGTGTGATACGTCTTCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:09a8893019e0
|
40 | — | — | — |
|
ACGCTGCCAGTATCGCCATCAAGGTGTGAACGACATTCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:536907bf3a03
|
40 | — | — | — |
|
CCGGCAAAAGGTGCGAAAACTAAATCACACCTCACCTCGT
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:c97067d05c40
|
40 | — | — | — |
|
ATACCGCACTAGGTGTGAACGCACCTCACACCTCTGCTCC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:66137ecb138b
|
40 | — | — | — |
|
TCCACGAAGGTGTGATACGAGTTCGCACCTCCTCACAACA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:29894374259e
|
40 | — | — | — |
|
CACCTAGGTGTTGCCATCACTTCACACCTCCCTTGCCATG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:75cae6f462c4
|
40 | — | — | — |
|
CCCGACCTCAAAGGTGCGAAAGTCATAAACACCTTCCGCA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:b1475dc35802
|
40 | — | — | — |
|
TACTCAAGTGCAGGTGTGATGTACGTTTCACACCTCGGAA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:704ba8c2a143
|
40 | — | — | — |
|
CCACGAGGTGCAAACGACGTTCACACCTACACGCCCCCTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:ad5d325cbf3e
|
40 | — | — | — |
|
CCCCCCCAAGGTGTGAACCCAATGTCACACCTTACCGCCA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:1606454299e6
|
40 | — | — | — |
|
GAAGGGTGTGAACGATACATCACACCTATGGCTTCGCCGA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:0c394b06b863
|
40 | — | — | — |
|
CACGTACGTGTTAACGGCTATCACACCTTCCTCCGCCTTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:9438d4aaac64
|
40 | — | — | — |
|
CCCGTCATACTTCGCACCGTTATTTACGAGTTCACACCTA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:48da22bfb8b4
|
40 | — | — | — |
|
CGACGCACATACGGAAGGTGTCAAAGGCCGTTCACACATC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:1186e5cf97f2
|
40 | — | — | — |
|
AATGTGTGACAATTATCTCACACCTCCCACGTAACGTCGC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:11a046e528a5
|
40 | — | — | — |
|
GCGGAGCAAGGTGTTAATTCACTTCACACCTACACAGTGC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:85dbc912a60d
|
40 | — | — | — |
|
TGCGTCCGAGGTGCCAAAACCCGTTCACACCTTCCGCGCC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:367a6677502a
|
40 | — | — | — |
|
GATACGCGTCCACACCTTACCGTTACGACTTCACACCTCG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:a78f4366e408
|
40 | — | — | — |
|
GCACCGACGAAAGGTGTTATCTTTCAGTCACACCTCATAT
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:2e0ea581e27f
|
40 | — | — | — |
|
TAGAAGCCTTCACAAAAGGTGTGAACCCATTTCACACCTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:18614f902198
|
40 | — | — | — |
|
ACCCCGCGAAAAAAGGTGTTAACACGATTTCGCACCTAGT
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:da1436688ab5
|
40 | — | — | — |
|
GTCCCCATCCACATCAGGTGTGACACTCAGTTCACACCTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:18e965352825
|
40 | — | — | — |
|
CGTTGCAAAACGAGGTGTTACCATCAATTCACACCTTGAG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:e9d99f9af16e
|
40 | — | — | — |
|
GAATCCCGCCATTTGTCGAAAGGTGTGAAACCAGTTTAAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:d717784e5479
|
40 | — | — | — |
|
CTCCGCCGCCGAGGTGTTAAGAGCGATCACACCTTCCACC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:e39ed212b497
|
40 | — | — | — |
|
TTGGACGCGTAGGTGTTACCTCGCAGCGACACCTTCCCTA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:4b27622e21e3
|
40 | — | — | — |
|
GCAGGTGTGAACAACAGTTAACACCTCCCACGGCTGGCCC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:b6779bec678c
|
40 | — | — | — |
|
AAGCGCGACATCGTGAAGTGTGAAAAAGGATTCACACGTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:81b45714ec6d
|
40 | — | — | — |
|
GCAGAGGTGTGAAGACATAAAAAAGGTGTTGAGCCACGGC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:d16204662a99
|
40 | — | — | — |
|
GCCGATGTGTGAATTCCACTTCACACCATTTCGGTAACAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:4571e9d4f574
|
40 | — | — | — |
|
AAAGGTGTCACACGTACGTCACACCTTCCCTCCCACCGAA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:70129f3e6e9a
|
40 | — | — | — |
|
GCTACCGTTCGAAGGTGTGACCCCACATCACACCTCCGAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:7137dcb2f486
|
40 | — | — | — |
|
TTGACAAGGTGTGATACGCGACTGACACCTTTTACCACCA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:19d2d4630b08
|
40 | — | — | — |
|
GCCACACTGGTAACAGGTGTGATCCTACTTCACACCTACC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:fdc335e57c16
|
40 | — | — | — |
|
TACATCAGCATGAGCGTGAAAATCGTTTCACACCTTTTGC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:75e390895dda
|
40 | — | — | — |
|
TGTGTTATGTCTGTTCACACCTCACACTTAATTACCTCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:c2c176b51bbf
|
40 | — | — | — |
|
TTTCCCCCCTCGCGCCCACGAGGTGTGACTTGATGTTCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:b505afbc956c
|
40 | — | — | — |
|
GGTCGCGCGCTCCGAAGGTGCGAAAAAAACATCACACCTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:5c13d9d03689
|
40 | — | — | — |
|
ACGTGGCGGAGGTGCGAATCAGCATTCACACATTCTCACG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:88a96371f741
|
40 | — | — | — |
|
CAGTCTGGTCATTAATTCACACTTCCTATGAAAGGTGTGA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:dcea84003686
|
40 | — | — | — |
|
GGCCCGCGCTCACGCAAGGATAGGTGTGAACCCCTTTCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:c38dad823597
|
40 | — | — | — |
|
GACGCTACGCCAACTCCACGAGGTGTGAAAGTAAGATCAC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:7ec6ac62bdb2
|
40 | — | — | — |
|
CGCATACCACTAGGTGCAAACGATGTTCACACCTTATCAG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:c4bf6d2d88a2
|
40 | — | — | — |
|
GCAAAACACCTGCGATATGTGTTAACACTTTTTCACACCT
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:76eec1a301a0
|
40 | — | — | — |
|
CGGACAGGTGTGAAATGATTTCGCACCTGCCATTCGTGGA
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:8222c93d0edf
|
40 | — | — | — |
|
CAACAACACGTAAAACGTGTGAAAATTCGTTCACACCCTC
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:9743ef462859
|
40 | — | — | — |
|
CAACGACGACACCTCACGTAACGACTTCACACCTTCGCCT
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:d34f1bb5ae1b
|
40 | — | — | — |
|
GTTGACTAGGTGTGAATAATACTTCACGCCTTCACATCGG
PANAPTA:P28356:HOXD9_TBX21:PRJEB66722:R3:c91235c408ee
|
40 | — | — | — |
SELEX rounds
R3 ·final