HSF1_IRF8
CAP-SELEX sample HSF1_IRF8 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
GGCGTGAAACTACGAGAACAATCGAGAACGAATCGCGACC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:6c9ef29f686c
|
40 | — | — | — |
|
GCGTTAGACCGTAGAACATTCCAGATGCTACGAGGACGTC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:f76484d58185
|
40 | — | — | — |
|
CACAACGAAACTTCTCGAACGTACGTACGCTCGTGAACGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:5e9735e08fc2
|
40 | — | — | — |
|
GTTCTCGAATCTTCCAATGACGACGTACGGGACGCGACAT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:d3e529fad123
|
40 | — | — | — |
|
AGCGAAACCCCGCAACCAGCAGAACGTTCTCGAAACTTCG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:fedb7ff0296f
|
40 | — | — | — |
|
CCGCGTGATCACGTGGTAACGGAATCTAGAACGTTCCAGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:4f4553877019
|
40 | — | — | — |
|
GACATTCGTTGCGCAAAACTCAGTTCTGGAACATTCGCGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:5cc48df900be
|
40 | — | — | — |
|
CATCTCGAACCTTCCACACACGAACGCTACCGAAACCAGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:c4d3135ccfbc
|
40 | — | — | — |
|
AACCCTGCTAAACGTAGCTTCGAGAATGTTCTGCGTTACG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:95347acb6c2d
|
40 | — | — | — |
|
GTTCTCGAACATCGATGCCGCCCACCCGTTAGTTGCGTGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:2411b91065ac
|
40 | — | — | — |
|
GCGCAGGACCTATGGAACATTCTGGAATGCACCATCATGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:cede1b11cac1
|
40 | — | — | — |
|
CGACACGAACGTTCTAGCACGTTCGTTCAGCCTCGTCCTG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:50b55bfa98f6
|
40 | — | — | — |
|
CCGGTGCTTACGGACATTCCAGAACGTTCTAGCACTTACC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:6cd8907f814b
|
40 | — | — | — |
|
ATTCGAGAACATTCTCTTCCTGCATGGCGTGACCACGTCA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:20688b483806
|
40 | — | — | — |
|
CAAAACATGTACCGAAACCACACATCGAGAACGTTCTAGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:29800e94b58d
|
40 | — | — | — |
|
TGCACGTACTGGCGGATTCTAGAACATTCGTTGACTCGCG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:62a67ff681af
|
40 | — | — | — |
|
TTTCGCGAAGGATCGAGCACAGTCCATCCCCTCGCGTCCA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:cc0c220c62b6
|
40 | — | — | — |
|
GAAGGCTTCTAGAACATTCGCGAGTATAACGCTTGACCGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:d6bd204a3311
|
40 | — | — | — |
|
AACATACACGCCATCTGCCACGAACATTCTAGCACTTTCA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:3199038e2d73
|
40 | — | — | — |
|
GACGAATGTTCTAGAAGGTACGGCGCGGCGTGCCTTGGGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:d34ddc328657
|
40 | — | — | — |
|
CCAGCCCATCCGCGGTGCGCGCATTCGCGAACCTTCCAGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:4d28a434270e
|
40 | — | — | — |
|
CAGCGTAGCCGAACATTCGCGAACGTTCGCCAAGCCTGAC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:69d128dc178f
|
40 | — | — | — |
|
ACGCACTACGCCTCAATGCCAACATCTGGAATGTTCTCGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:203cee9e2b06
|
40 | — | — | — |
|
TGCAACGTTCTCCACCTTTCCAGACGTTTCGAGAACACGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:5398861a6695
|
40 | — | — | — |
|
CTGCAGTAACCTTCGAGAACTTTCTTTCACTCGTCAAGGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:c35e57dbbbc7
|
40 | — | — | — |
|
CTGGAAACATCTAGAACTTTCGGGGTAGTACGATACCGCA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:1809702ba3ab
|
40 | — | — | — |
|
CGGTAATTCTACACATGAACATTCTCGAAGCATCCAGCCT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:aaeb19ae925b
|
40 | — | — | — |
|
CATCTCGAACCTTCCATGGCGCTAACCGGACCAGCGCGAC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:288c11ea919f
|
40 | — | — | — |
|
CCAAACTGAGGAATGTTCTAGAACGCGAAACACGCCTCGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:e7ed9e58a481
|
40 | — | — | — |
|
AGCGGCTATGCACGGTTTGGGGCGGATCGAACCTTCCAGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:e143552fb5fc
|
40 | — | — | — |
|
ATAGGCTCGTGGCGACGGCCATTCGAGAATATTCCATCCC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:78c7fc7d146f
|
40 | — | — | — |
|
AGGCCTAAACCCAGATTGTTCTCGAAGCTTCCCCTTCTGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:7d68bd84c348
|
40 | — | — | — |
|
CTGCGCGGACTACCGAATGTTCCAGAACACCACCAAGCGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:b6b8a31a72d7
|
40 | — | — | — |
|
GTTCTAGAACGATCCGCAACCTTCCACACAGAGCTAGCGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:41ed93edebc0
|
40 | — | — | — |
|
CTGTCATCCCTCACGAACATTCTCGAATGTTTGAGCACAC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:bc33637de41a
|
40 | — | — | — |
|
CCCCAAGGCACCGTCGAGAACGTTCCAGACGTATCGCCTA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:b24c0953f7ce
|
40 | — | — | — |
|
AACATTCCAGAACAACGGCAAGAGCGAAACCCTCCTAGCT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:a456b7be3908
|
40 | — | — | — |
|
ACGTGCGTTGAATGGAATGTTCTAGATGGAAGTTGGATGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:976a24d67d80
|
40 | — | — | — |
|
CGCGGTCCCATATCACTGACGTGTTTCGGAATGTTCTGGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:4a1caf718abd
|
40 | — | — | — |
|
TGCGCCCTTTCTCGAACATTCGATCATTTCGTCCGGACGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:f3a46ab9cd96
|
40 | — | — | — |
|
CGCGTGGACCACGAAGTTACGCGAACCTTCTCGAACACTT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:511a5881f60e
|
40 | — | — | — |
|
ATGCGGATCACCCTCTCTGCCGCATCTAGAATATTCGCGA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:4c9591432ec7
|
40 | — | — | — |
|
GTTCTAGAACAACGACCAATCGAGGGACGTACATCGTGGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:b94ffccb0e31
|
40 | — | — | — |
|
CATCCAGAACGTTCGTCCAATTCAGAACCGCACTCCCTCA
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:c70a1d7808ab
|
40 | — | — | — |
|
GCTAACCGATACACAATGTACGCAGAACATTCGCGAACGT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:77569abbbbde
|
40 | — | — | — |
|
CACCGTGCTGCTCTCGAACCTTCTCGTAGGTACTTTTCAG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:d2972e326825
|
40 | — | — | — |
|
AAGAACGAACATTCCAGAATGGTGTAGCACCACCTACCGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:8d8a91815b88
|
40 | — | — | — |
|
TTGCGGTGGAGACACATGTTCCAGAACCTTCGACGCGAGG
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:7f81d7214bb2
|
40 | — | — | — |
|
TGGTGCTCCCGTAGAACACGGTTCGAGAACTTTCTTACGC
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:bd19143ecd96
|
40 | — | — | — |
|
AAACTTCTCGAATGTCCGCAATCTAACACAACGTCGCGTT
PANAPTA:Q00613:HSF1_IRF8:PRJEB66722:R3:fee4c2e2f324
|
40 | — | — | — |
SELEX rounds
R3 ·final