HSF1_SOX9
CAP-SELEX sample SOX9_HSF1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCTACTAGAATGTTCTTTAACGAGAACATTCTAGTATGCT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:b79402ec592c
|
40 | — | — | — |
|
GTAAGCTTCCGTCCCGTTCCAACGATTGTTCTAGGCTATT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:6da6e24a709d
|
40 | — | — | — |
|
GCGCTGACTTCTAGAACATTCTCCTATCGCTACCTTTCGA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:1408514d7eeb
|
40 | — | — | — |
|
CAAGCTGTTCCTTCGAGAATCTTCCTTATCCGCGCAACTT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:f58b70ad4104
|
40 | — | — | — |
|
TAACAGCTCAAATACGAACCTTCCAGAACAACACGATCAG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:b297ec493bd4
|
40 | — | — | — |
|
AATATTCTCGAAATCGAACACTTGACGTCGTCGGGTCGGA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:95e5dd5db0c2
|
40 | — | — | — |
|
CACTACGCCCTGCAGAGAAGGTTCCAGATTACATTCACCT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:257c4bb5d582
|
40 | — | — | — |
|
CACAAGGAACATTCTAGATATCCAACAGCTCAGGACCGTG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:f59b736834be
|
40 | — | — | — |
|
ATCGACATCCCTACCTGTTGTTGGAACGTTCCGGAACTAT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:224aefbc4bfd
|
40 | — | — | — |
|
CCACGTCGTAGCGGACAGGAGGCAGAATCTCTGGAACATT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:bdd4cca26ab7
|
40 | — | — | — |
|
TGACATGCATCTTCTAGAATGTTCGGAGTGAGCAACTCCC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:f0b50a244aa5
|
40 | — | — | — |
|
TCACTCGTTAAAAAGAACATTCTAGACTATGTAACCCTCA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:81595ed24c10
|
40 | — | — | — |
|
CACAAAATACCAAGCCGAACGTTCTCGAATGCACTGCCAC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:87b19c70eecd
|
40 | — | — | — |
|
GCGGATCCGGATTTCGAGAACGTTCGCGTAGTGAGAGCGT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:aadd15705dda
|
40 | — | — | — |
|
ATCCAGAACTTTCCATCGCTTTATTTGACCTTGGTTCTAT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:3903a2eda4a2
|
40 | — | — | — |
|
GAATGTTCTAGGCTGTGAACCAAAGTACAACCACCTGTTA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:6003cc59c7f4
|
40 | — | — | — |
|
AAGCCCTCCGCACTCGAGCCTAGGCTCTCGAACATTCCGC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:2b4184da6650
|
40 | — | — | — |
|
CTCCCCTCCATAGGCAATGGAATGTTCTAGATTACGGCGC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:ba9bb853bb3b
|
40 | — | — | — |
|
CTAAAACAAATGCGTAGAAAACGCCGAATGTTCGAGAAGT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:70eea60c83d4
|
40 | — | — | — |
|
TAGCATTGTATGAACTCCACTAGAACGTTCGCGAAACGTA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:426f6d9547f9
|
40 | — | — | — |
|
GTTCGTGTAAGAGGATTGGAAGCTTCTAGAAGCTCGCGAC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:0788916a914c
|
40 | — | — | — |
|
GCGTCTCCACGGAACATTCTCGAATACCCGTCTCACTCGT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:fd44037a343b
|
40 | — | — | — |
|
AATATTCCAGCAAAAGTCACGTGATCTGCGTGGTTACTTG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:9c43d2afb2b4
|
40 | — | — | — |
|
TACCGAACGCTAAGGCGATGATCTTTCCAGAACTTTCTGC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:a6112dae018b
|
40 | — | — | — |
|
AACCATCTAGAACCTACGTTACAAAGGTATGCAATCAGAA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:05c885b50880
|
40 | — | — | — |
|
CCCGAATCTACAACCGCGTAAGTGCGCGAACATTCTGGAA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:c4e277a2e62d
|
40 | — | — | — |
|
TGCGCGTTCTCGAACGTTCCAAATATAATTTAGCACCTTT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:311f469b7f8a
|
40 | — | — | — |
|
CCGTGGTGGTGTACAGTCTCGAACATTCGACTGAAAAATA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:fe2a281b7145
|
40 | — | — | — |
|
CTAACAGTTGTCAAGCCCGGATCTACGATTCTGGAATATT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:59657544f4a1
|
40 | — | — | — |
|
AAACACGCTGTTCGCTTCGAGAACATTCTACGCCACCAAT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:268c28ee30ea
|
40 | — | — | — |
|
AAAGTATCATTGCCTAGAATGTTCCATGACGTGGTTGCCT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:0fdca3f03a9e
|
40 | — | — | — |
|
CTCTAGAACATTCTGCCCCTATACCACAAGGGCTCCGCGG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:dc306f83bc88
|
40 | — | — | — |
|
CAACACCCCACACGGCGAAACTTCTCGAACAGTCCTCCCC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:90f28ce972f5
|
40 | — | — | — |
|
TGCTAGTTTTATAATGCGGGAGAACGTTCTCGAATTCACA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:f8537c4ab789
|
40 | — | — | — |
|
ACCACTAATTCTAGAATGTTCGACTGATACGAGTTATACA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:8492de8a8aec
|
40 | — | — | — |
|
GCAACTCAGACGGATTCCAGAACTTTCTCTCAGGTAACCC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:d47ceceed865
|
40 | — | — | — |
|
ACGCGCCTTTCGTCATAAGAACTTTCTAGAGCTTACAACG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:06c960605e9f
|
40 | — | — | — |
|
CTTCTAGATGATTCGAATTAGCATTCATACTTCATTGCCT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:e4c89393adc1
|
40 | — | — | — |
|
GAACATTCTCGATGGAGAATGATCCCTTGCACACATAGTA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:34a3f9fb87c9
|
40 | — | — | — |
|
TCTCAACATATTTTCCAGAACATTCCTCCACACTCGAAAC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:6c5a7edf40ce
|
40 | — | — | — |
|
CTTCTAGAATCATCTAGTCTGACGATCCGTTGTTGCCACC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:fee7e10f8312
|
40 | — | — | — |
|
AAGGTCGCGCCGTACTGCTCAGAACGTTCGAGAACGTTAC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:f43050429389
|
40 | — | — | — |
|
TAATTGCATGGTGCATCTGGAACGTTCGCGTGACTCAAGT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:4def1fafa058
|
40 | — | — | — |
|
CGTATCACCTCGCCACCGAACATTCGCGAACATAGTGCCA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:fd3e5b65c953
|
40 | — | — | — |
|
CCCCACGCCGCGCTTCGAGAATATTCTGCCGGACCCTCCA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:34eb4d76070c
|
40 | — | — | — |
|
ACGGAATGTTCTAGAACACGACGCAACGGACTATGCTAGC
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:56711ad9ee3a
|
40 | — | — | — |
|
GCTGACATTCTCGAAATTTCTGCACACACTGAGACGGGCA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:822b2542387c
|
40 | — | — | — |
|
CGTGTCAGCGATTATTGACCCATGTTTTGTAGAACGTTCT
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:869eb7b9fdf3
|
40 | — | — | — |
|
TCTAATATTCTCGAAGCTTCTTGACAACCACGCAAACGCG
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:db87e0a5164b
|
40 | — | — | — |
|
CGAGACGACAATCTAGTATGTTCTCGAACCGACGTCTGCA
PANAPTA:Q00613:HSF1_SOX9:PRJEB66722:R3:521ac712fd6e
|
40 | — | — | — |
SELEX rounds
R3 ·final