HeLa

aptasim_round0; aptasim_round1 · 9 Rounds of Cell-SELEX against Hela Cells · 19 runs in PRJNA321551

Organism
Nucleic acid
DNA
Rounds available
R0,R1,R2,R3,R4,R5,R6,R7,R8,R9,R10
Sequences indexed
10,000

Top enriched sequences

More via API →
Sequence Length log2 FC P(active) Class Monotonicity
GTCCGGCTAGACGGAGCATCGACTTTTTTGTACTAAAGGG
PANAPTA:NA:HeLa:PRJNA321551:R10:2f05065c6043
40 15.43 0.50 strong_positive 0.80
AGCCGGGTGTACTATTGGTAGCGTAGACTCGAACTGAGGT
PANAPTA:NA:HeLa:PRJNA321551:R10:88b57eabee2f
40 15.02 0.50 strong_positive 1.00
GATGAACCGCCCGGGGAGCAGTGTACTATGGATCTCGGTG
PANAPTA:NA:HeLa:PRJNA321551:R10:d687bded0881
40 14.58 0.50 strong_positive 1.00
ACCTCGCTGCCATGATCCGTGTACTAGTTTAATACCAGCC
PANAPTA:NA:HeLa:PRJNA321551:R10:84deb83ed31e
40 14.57 0.50 strong_positive 0.80
TGTACACGATAGAAGTTGGTTTACTCGGTGTTACCTACTG
PANAPTA:NA:HeLa:PRJNA321551:R10:977d4c060f92
40 14.30 0.50 strong_positive 0.60
TGTGTACTAAGCCGGGTCGGCCAGTGACGACGCGGGTTGG
PANAPTA:NA:HeLa:PRJNA321551:R10:20acf4cc3ea7
40 14.25 0.50 strong_positive 0.80
AGGCGTGTACTCAGCCCCATTGGGTCTCTACCCGACAGGT
PANAPTA:NA:HeLa:PRJNA321551:R10:d7355cbf02ee
40 14.11 0.50 strong_positive 0.80
CAACCCAACGACGGTGCGAGAGTTGTACGGTGTACTACGA
PANAPTA:NA:HeLa:PRJNA321551:R10:d57d2e957740
40 14.05 0.50 strong_positive 0.60
GGCGGAGCAACGCCGTGTACTAGGTGTGGCTTATGTTATC
PANAPTA:NA:HeLa:PRJNA321551:R10:0b173a92fa0e
40 13.93 0.50 strong_positive 0.40
GCCCGGTGTACTACGGGGCCCTGTGATGTCCTAATCCAAA
PANAPTA:NA:HeLa:PRJNA321551:R10:9e9c22bf69d3
40 13.89 0.50 positive 0.20
TGGCGGGGGCCTCGGGGCGGTCTGTGGCGTGTGCTAGTTA
PANAPTA:NA:HeLa:PRJNA321551:R10:b3b90327d764
40 13.87 0.50 strong_positive 0.70
TCCGACCCACCATTCAAAGGTGGAAGAGTGATCGTGTACT
PANAPTA:NA:HeLa:PRJNA321551:R10:b2ac22a9ec6b
40 13.77 0.50 strong_positive 0.80
TTGGTGGGAGTCTGGATGTGGCTTGAGTCGGGGGTTGCTT
PANAPTA:NA:HeLa:PRJNA321551:R10:335ba93e4ac1
40 13.75 0.50 positive 0.30
GATGACCTGCCCGGGGAGCAGTGTACTATGGATCTCGGTG
PANAPTA:NA:HeLa:PRJNA321551:R10:d7387e9613c6
40 13.64 0.50 strong_positive 0.70
CGCTTCGCTTATGCAAACGTTATCTGCGTGTGTAGTAACG
PANAPTA:NA:HeLa:PRJNA321551:R10:33a9a982325d
40 13.62 0.50 strong_positive 0.70
GAGGCAGGATGGGTACCCTTAGTCGGAGGGGCACTCACAT
PANAPTA:NA:HeLa:PRJNA321551:R10:20f01686e831
40 13.60 0.50 positive 0.30
GCCCGATGTACTACGGTGCCCTGTGATGTCCTAATCCAAA
PANAPTA:NA:HeLa:PRJNA321551:R10:9bf00a587f9b
40 13.50 0.50 strong_positive 0.50
TATGTCACATCCGGCTATACGTGCACTAAGCCGGAGGTCC
PANAPTA:NA:HeLa:PRJNA321551:R10:33656a94d5fc
40 13.35 0.50 strong_positive 0.90
GCCCTCCGAAGTCAGGGTGTACTACCTGAACTTCGGACGA
PANAPTA:NA:HeLa:PRJNA321551:R10:b0b9ab7682d1
40 13.09 0.50 positive 0.30
GTACCAAGGCATGTGTAGTAGCCTTATTTCAGCGCACGTC
PANAPTA:NA:HeLa:PRJNA321551:R10:cbb195f36fec
40 13.09 0.50 strong_positive 0.70
TGCAAGTCGGTGTGGCGCGTGCGGACGGGGGTGGGTTGCT
PANAPTA:NA:HeLa:PRJNA321551:R10:3e155b5f4cbb
40 13.02 0.50 positive 0.10
CACATACCTGATGTGTACGAGTATGGAGTGTGCGGCCGTT
PANAPTA:NA:HeLa:PRJNA321551:R10:d908738e3c9e
40 13.01 0.50 strong_positive 0.80
CGTGAAACTATCGTTTAAGAAGGTCAGTGTGTACTAGCGC
PANAPTA:NA:HeLa:PRJNA321551:R10:a08bbf2ff0af
40 12.96 0.50 positive 0.20
TGAAACTTGGTCGTTACAGGAGTTCTAGTCGGTGCACTGC
PANAPTA:NA:HeLa:PRJNA321551:R10:1131219a85c0
40 12.94 0.50 strong_positive 0.70
GGTGTACGACGCGCATTGAGGTAGATCCTGGTCCTTGGAA
PANAPTA:NA:HeLa:PRJNA321551:R10:12065dc48380
40 12.91 0.50 positive 0.30
GTGTACTACCGTATCGCGGAAGGGGCCCGATGTGCAGTCC
PANAPTA:NA:HeLa:PRJNA321551:R10:291e3475246a
40 12.91 0.50 strong_positive 0.70
GTGTACTACCGTATCGCGGAAGGGGCCCGGTGTGCGGTCC
PANAPTA:NA:HeLa:PRJNA321551:R10:ce6e9443970b
40 12.90 0.50 strong_positive 0.40
GGTCATGCGCTTACGGGTCAGAGTCGGCTACCGTCGTGAG
PANAPTA:NA:HeLa:PRJNA321551:R10:7e86cd33032a
40 12.89 0.50 strong_positive 0.60
GCCAATATCGTTTGGTCGTTGTGACGTCGGGCAGCGTTCC
PANAPTA:NA:HeLa:PRJNA321551:R10:ced736a466af
40 12.87 0.50 strong_positive 0.40
ACCTCGCTGCCATGATCCGGGTACTAGTTTCATACCAGCC
PANAPTA:NA:HeLa:PRJNA321551:R10:5b2d75ab5bb8
40 12.83 0.50 strong_positive 0.80
TCTGATTCCCGTGACGCAGCAGTGTACTATCGTGTCTCAA
PANAPTA:NA:HeLa:PRJNA321551:R10:600b3d76054d
40 12.83 0.50 strong_positive 0.60
CCTATTTTTTATACAGGTGCACTACTGATACATGGGAGCA
PANAPTA:NA:HeLa:PRJNA321551:R10:372f0eee2671
40 12.80 0.50 strong_positive 0.40
GCCAACCTGTGTACTAACGGTTTGTGGCCTCGCATACTGC
PANAPTA:NA:HeLa:PRJNA321551:R10:654de2d35b4b
40 12.77 0.50 strong_positive 0.60
AGTCATGTGCTTACGGGTCAGAGTCGGCTACCGTTGTGAG
PANAPTA:NA:HeLa:PRJNA321551:R10:77bbbf329b42
40 12.71 0.50 positive 0.20
AGGGTCTGAGCTGCTATACCAGTCGGGGTGTGACTACCCT
PANAPTA:NA:HeLa:PRJNA321551:R10:19e6ec1a32b5
40 12.70 0.50 positive 0.30
GGGTATATCTTTATGGAGTCGTTTGACTATAGTCGGTGTA
PANAPTA:NA:HeLa:PRJNA321551:R10:e4c39d6ece15
40 12.67 0.50 positive 0.30
AGCCGGGTGTATTATTGGTTGCGTAGACTCGAACTGAGGT
PANAPTA:NA:HeLa:PRJNA321551:R10:32420fde195e
40 12.65 0.50 strong_positive 0.50
CGCTTCGCTTATGCAAACGTTATCTGCGTGTGTATTAACG
PANAPTA:NA:HeLa:PRJNA321551:R10:4c11cbeb0dfc
40 12.64 0.51 strong_positive 0.50
GGTCATGTGCTTACGGGTCAGAGTCGGCTACCGGTGTGAG
PANAPTA:NA:HeLa:PRJNA321551:R10:b4e3c98955d0
40 12.64 0.50 strong_positive 0.70
GTTACTAACGGATCGCTGGGCGTTTGTGTACTATGCGCTT
PANAPTA:NA:HeLa:PRJNA321551:R10:15cd35824b9d
40 12.64 0.50 strong_positive 0.50
GGCGGAGCTACGCCGTGTACTAGGGGTGGCTTATGTTATC
PANAPTA:NA:HeLa:PRJNA321551:R10:170789c879da
40 12.61 0.50 positive 0.10
AGTCGACCGCATACATTGTCGCGTGGTCGATCAGGGGCTT
PANAPTA:NA:HeLa:PRJNA321551:R10:fbc36c77d1f6
40 12.60 0.50 positive 0.00
GTGTACTATGCATTGGGGGGTGGGACAAGCTCGTGGGATA
PANAPTA:NA:HeLa:PRJNA321551:R10:6874716a6bd6
40 12.55 0.50 strong_positive 0.80
GGCGCGTAGCCGATGTAAGTCGGTACTTGGTCATGTGCCC
PANAPTA:NA:HeLa:PRJNA321551:R10:6e250c0eae4b
40 12.52 0.50 strong_positive 0.60
TGCGAGGCTGCCGGTGTACTATGGGTCTTGCACGAGACTT
PANAPTA:NA:HeLa:PRJNA321551:R10:26c7165d0de0
40 12.48 0.50 strong_positive 0.70
GTACCAAGGCATGTGTGCTAGCCTTATTTCAGCGCACGTC
PANAPTA:NA:HeLa:PRJNA321551:R10:f31258822e91
40 12.45 0.50 positive 0.30
CTGAGAGGCCGTGCCAGTCGGCGCACGATGGTTTCAGCCG
PANAPTA:NA:HeLa:PRJNA321551:R10:807d23af953a
40 12.45 0.50 strong_positive 0.50
ACCAGTGTACTAAAGGCCGTATCTTTCGAGCGGATGTCTT
PANAPTA:NA:HeLa:PRJNA321551:R10:1808d9ded83b
40 12.44 0.50 strong_positive 0.80
TAGTCGGGGTGCGGTGTTCTCTGGGTGCAAGTCTGGGGAA
PANAPTA:NA:HeLa:PRJNA321551:R10:f16b0217d051
40 12.43 0.50 positive 0.30
CGTTATATTGATGAGTCGGGCATGCAGTGAGCGTTCGTAA
PANAPTA:NA:HeLa:PRJNA321551:R10:8e18796e748e
40 12.43 0.50 positive 0.30

SELEX rounds

R0 R1 R2 R3 R4 R5 R6 R7 R8 R9 R10 ·final