IRF8_PDX1
CAP-SELEX sample PDX1_IRF8 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGTTTACGTAACGAAACCACAACTAGCCTACTTTCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:06bf2d4716d5
|
40 | — | — | — |
|
CCGAAACTGTCATTTTCGTTAATGGCTGGTGCAGTACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:7f234911fdc7
|
40 | — | — | — |
|
CCGAAACTGTCATTTTCGTTAATGGCTGGGGCAGTACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:6f6764808653
|
40 | — | — | — |
|
CAAGCAGTTATACCGAAACCGAAACCAGGGTCGTCGATCT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:d1337a3e5ed1
|
40 | — | — | — |
|
GTGAAAGTGCAATCAGTTTCACATTATCACTGGACGTAAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:5edbafa6f5eb
|
40 | — | — | — |
|
CCATCCTTAATGCGAAAGTAAAACCAACGTTAATTAGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:f280f0173272
|
40 | — | — | — |
|
ACGAAAGTGAAACTATTTAACGAGTAACGATAATCACAAC
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:e79276b28093
|
40 | — | — | — |
|
CTTCATCGAAACTGAAAGTCATTAACGGCAAATAGCCTTG
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:78b443addb18
|
40 | — | — | — |
|
GCACTAATGCACTACTGATTGCAGTTTCACTATCGAATTA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:c23a21e4475e
|
40 | — | — | — |
|
TTCGAAAGTGACTAACCTTTCACTTTCGCTTTAGTAGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:6a5f56867449
|
40 | — | — | — |
|
ATTGCTAATTACTGTACTGCTTTCGGTATCGGTATCGTTA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:7c8027e87d1d
|
40 | — | — | — |
|
CCGCACTAACGAAACCATAACTTACCACGGGTTTCAGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:40a671b08bfe
|
40 | — | — | — |
|
GCGAAACAGAGCCAGTTTCGCTTTCGTAACACGCTTCCTC
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:e5a5fb6a543d
|
40 | — | — | — |
|
GCAAAACTGAAACCTGCGACTGTTCTAGCGCTCTCAGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:abd4632fb7aa
|
40 | — | — | — |
|
AAGTGAAACTGCGCACATTGTGTCATTAGCTGCATCTTAA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:ef1f4cee616a
|
40 | — | — | — |
|
GTAATCATTCGTGTGATTACGAGATGTCTGCTTTCGCTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:11f06dbd970d
|
40 | — | — | — |
|
ATAATTATCGAAACTGTTACTAATGGTCCATAATCACTCT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:aa2a8da17e42
|
40 | — | — | — |
|
GACATTGGACCATATTAAGGCAAATGACCACTTTCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:a8641b57a6b8
|
40 | — | — | — |
|
GCTATTTAGCGCAGTAATGCGAGCCCGTCAGTTTCGGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:b2cf90457d1f
|
40 | — | — | — |
|
ACGAAACCACTTAGCAGACACTTCCTCAGTTTCGACTGCA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:1f3891a7bacf
|
40 | — | — | — |
|
CCGAAAACGAAACCGAACCCTCAATTACGTGACTACTTAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:8e088c3c0f78
|
40 | — | — | — |
|
CACTGGACGGTAAATGCCCCATTAGTCACTGTTTCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:a7ecf723b850
|
40 | — | — | — |
|
GTCGTTAACTAACATCACTGATTAGTTGCGCTTTCGATTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:bd6457ead6cb
|
40 | — | — | — |
|
CTCAATGAGTATCATATGGCCGCGTAATGAGTTGCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:a6512bc1f064
|
40 | — | — | — |
|
ACGCACGTTGTAATTAGCAGACACTAATTGCATTCGGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:d49a684c901b
|
40 | — | — | — |
|
TGCCCTATACGGTGGATAATTAGCGTTATGCTAATTATGC
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:56aff7c1620c
|
40 | — | — | — |
|
CAGACGAAAGTGATACCCGCTTAAGCTGCTAATGAGGGCA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:428831e66e0c
|
40 | — | — | — |
|
AACTACGTCACCATTAGGCGAAAGTAAATAGTTTCATTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:52bf84960611
|
40 | — | — | — |
|
CAGCGTTGCCTAATATTGCTAATAATGCGTGTTTCGGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:681e63ca19ff
|
40 | — | — | — |
|
TCGTTCGATACCGTGAGTTAGTTTCGGTTGGTATCGCTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:466926984096
|
40 | — | — | — |
|
TGGCACAGACTCGAAACCGATACCGTCATTAACGCTTTGA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:97aa294b07ed
|
40 | — | — | — |
|
ACGATTATCAGGCAACGACCCTAACTACTTTCACTTTCGA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:bbc5a762ab00
|
40 | — | — | — |
|
CCATTAGGGAGAAACCGAAACCACATTAACACCGCAACTA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:aaf696121643
|
40 | — | — | — |
|
GCTAACGAAACCGATACTCATAACCGAAACACGGTACATG
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:08b669baf4de
|
40 | — | — | — |
|
ACGAAACTACTTATTACCTGCCGCGTACCATTACCAGTAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:2112a281f7b9
|
40 | — | — | — |
|
CCAAGTGAGACTAATGTGGCATGATGAGTGCTTTCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:6f76eb763a91
|
40 | — | — | — |
|
TAACAACATGCGATACTGAAACTACGAATACTTTCATTAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:f952089b3f77
|
40 | — | — | — |
|
AACTGAAACTATGATTACGCTAGTCATTATTGCGAGGGGA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:860b6823b800
|
40 | — | — | — |
|
CAAACCGAAACACACCCGTAGTATCGCTTTCGTTTGCCAC
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:046a0d9e955d
|
40 | — | — | — |
|
GTTTCAGTTTCGTACGCCTAATGTTCCCTAATGGCCAGAC
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:7d094c90c818
|
40 | — | — | — |
|
GGGTCTCATTACCAATTAATGCGCTGTTGAGTTTCAGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:3a4f1a47d09f
|
40 | — | — | — |
|
TGTTGCTAAGCCAAGCCGAAACCGAAACATCGCTTAGGAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:f4689b71a725
|
40 | — | — | — |
|
ACCGAAAGTAATTATCATTACAACGTCGCGCGTTACGGTA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:c173115d5646
|
40 | — | — | — |
|
CAACATTACTACGTTAGATTGCCTTCTTTAGTTTCGATTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:a3a7af078ee2
|
40 | — | — | — |
|
AGGCCGAAACTAATCTGTTTCGAATTGCAGCGATTAGTAT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:803ff07ec630
|
40 | — | — | — |
|
ACGATAACGATAACGATTTTCCATTATCTCGTTTCACTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:f35b95e4fa3f
|
40 | — | — | — |
|
CATTGCGAAACCTTGTCAGATCGAAACCGAAAGTATGGCG
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:5d3de5a283c3
|
40 | — | — | — |
|
ACCGAAACCGCTAATTACCAGTTTCACTCGCGTAATTCGG
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:320dfb2c36fd
|
40 | — | — | — |
|
ACGAAACTCACCGGATCTCATTAGCATCAAAGTCCGGTTT
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:3f2b169b6549
|
40 | — | — | — |
|
CTGAAACCGATCCTAGCCATTCAGTCTCGCTTTCGACCTA
PANAPTA:Q02556:IRF8_PDX1:PRJEB66722:R3:03abe7752e4e
|
40 | — | — | — |
SELEX rounds
R3 ·final