LMX1B_PAX5
CAP-SELEX sample PAX5_LMX1B · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CGCAAGGTAAGGTTAATTAAATCGTGGTCACGCTTCACTG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:c551ac788646
|
40 | — | — | — |
|
GCAATTATTGCGTAACGCGTGACTACTCATGCGGAACGGC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:2772f18c357b
|
40 | — | — | — |
|
AATTGACCATACGTGCTCACTCAACCATGACGCACTCCAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:e40e18b1db6a
|
40 | — | — | — |
|
TAATTAAGACGCGAGCCACTGAACCGTGACCGTTACACGG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:b5173a0ffd59
|
40 | — | — | — |
|
TGCTTGCTGTCTTGTATTAATTAACGAATCACTGAACCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:a7f78acdd40c
|
40 | — | — | — |
|
CCGTCACGCGTGAGTGAGCATTAAGGCTATAACTGCACAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:598c1ce16a8f
|
40 | — | — | — |
|
GATTACGTCACGCTTCAGTGGTCATAATGAGTACTTCTCT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:22c3bab23aba
|
40 | — | — | — |
|
ACGATTTCGTTACACATGATTGCACCCGTAATTAACATTC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:46d514528369
|
40 | — | — | — |
|
CGCGCGACGCGTTGATGCAATTAAACCAATCATGCGTGAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:6177527eaf10
|
40 | — | — | — |
|
GAGAAGGTCACGCTCCGTTGATCACGGCCCAAAAGCAAGG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:59946d844610
|
40 | — | — | — |
|
GTTGATCACTGATGCGTAACGCGTTCTATCCTTGCAATAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:754ab0bf8ce9
|
40 | — | — | — |
|
AATTACGTACGTATTGTCCTAGTGACCACTCATCCGGAAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:a613a235cdf7
|
40 | — | — | — |
|
TCTGAACGTTAATTAACAGTTACCGTGGTCACCCAAGCAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:34cfc2dafe8a
|
40 | — | — | — |
|
GACATAATTAGCCTCCATGGGTACATTACCGTAATTCCCA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:21906284f523
|
40 | — | — | — |
|
GTCGAGTGCGTCACGCTTCAGTGCACAGGTTACCGAACGA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:0116fa05bec1
|
40 | — | — | — |
|
GAGCGTAATTGAGTCGAAACTACATTGTGCAGTCATGCAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:ed449e77ba4a
|
40 | — | — | — |
|
ACGTCGAGCGTGACGCATTCATGCATGACGCGTCAGCAGA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:b974bf21e4d6
|
40 | — | — | — |
|
GGCCTAATTAGTTAATGACTCGCCGGACTTATTGAAGCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:d058668771d8
|
40 | — | — | — |
|
GCAATTACCGCTTTGATACGCATGAATGCCCCGTTAAATG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:5cf701f61271
|
40 | — | — | — |
|
AATCAAGCGTGACGTGTATTCGGTTCGTCATGGAATACGC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:0c3daa6d2cde
|
40 | — | — | — |
|
GCGCAATGATCTGACTGCATGTGCAGTGAAGCGTGACTAA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:5761f32b392c
|
40 | — | — | — |
|
CGCCACGCTTGACCGATCACGCGATGCCAACTGAAGCTGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:976f5816e157
|
40 | — | — | — |
|
GCGGGAGGCAACGAAGCGTGACGAAGCGCTCAGCATGACA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:ed71eb158c02
|
40 | — | — | — |
|
GACCGCCGTCACGCTTGACTAATCCCAAGTGCGCTATCAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:0b0ff4bc2087
|
40 | — | — | — |
|
GTCAATAACGACTTAATACAATACGGAGTTGCTCATGCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:80a5a6c03bac
|
40 | — | — | — |
|
CACTGAGCGTGGACTCAACTGCCTGTGCTCATCCAACCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:05d31f6d7f38
|
40 | — | — | — |
|
GCTGATCTCGTCACGCTCCAGTAGGCACGACTTTGTGCCA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:0b16e82edc39
|
40 | — | — | — |
|
TGGTCACGCATGAGTAGGCACCCGTAAGTATATGTCGCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:22f2c1fd97b4
|
40 | — | — | — |
|
ATTCCCTGTCACGCATGACCGAGCAGATCAAGGCAAGCAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:6b92780447be
|
40 | — | — | — |
|
GCGGATGCGATGATGCGTGACCACAAAGAGCCAATTTGAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:f55cd324ca32
|
40 | — | — | — |
|
TAGTCGTCACGCATCAATGAACTTGCTTTCCCCATTTGTT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:a2d0f6daf535
|
40 | — | — | — |
|
TTCGCTCAAGAGCGCCGTCACGCTCTAACGGTCACGTAAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:2e57006b38ef
|
40 | — | — | — |
|
TGTGCATACGTGTGTAGTCGACCGTGACGACCCATATCCT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:3b3daafba179
|
40 | — | — | — |
|
GGGCGAATGCTTGACCGCACACGTCACGCCTGAGTGCTTA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:903c1e19e310
|
40 | — | — | — |
|
TCCGTGCGATAAGATGCCAACGCTACGCTCCAACGAGCAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:48f6183433a6
|
40 | — | — | — |
|
GCCAATCAACCAACGCACTCAACCGTGACGAGCTGCCATA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:88efce96004a
|
40 | — | — | — |
|
ATGGCGCGCTTGCACAGCCCGTCACGCATGAACGCCCACC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:81b6c0d58bef
|
40 | — | — | — |
|
GACCCCCCAGCCGTAACCGATACGCATGAGCGCACAACAT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:7e1678a3bf80
|
40 | — | — | — |
|
ATAATTACCCATAGCGCAGCAAAGCGCGATCAGGCGTGAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:2256de5f5835
|
40 | — | — | — |
|
ACCATGCCGTTACGCATGAATAGGCCTGGCTGATGTAAGC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:e0432b74c7fe
|
40 | — | — | — |
|
TCCTACCCCGTCACGCATCACTAACTGTCAACGCCATCCG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:1637285ca5bb
|
40 | — | — | — |
|
GAACGTTACGCTTCAATGACCTTACGGCACCGACCGCTCC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:62c72fcd4af4
|
40 | — | — | — |
|
ACAATTACGACACAGGCGTCACGCATCAGTGCTCTTCCAA
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:49cb1cf1e6a0
|
40 | — | — | — |
|
ACTTGTATGTGATCGACTTCACGCATGACTAGTCACCGCC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:3f66c6997961
|
40 | — | — | — |
|
ACCGTCCCAGCTCGACGCGCTCAGCGGTTACGCTCCAATG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:90489b57d9f0
|
40 | — | — | — |
|
TCCGGTGAGCCCACGTGCCTAATCGTGCGTGACCGATCAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:5dbbcc6bf5f6
|
40 | — | — | — |
|
GGAGTTGTCACGCATGGCTAAACACAACTCGGACTCAAAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:de72d0a1f6aa
|
40 | — | — | — |
|
CATGCTTATACAGACGTAAGCACTATGTGCAATGGAGCGT
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:adfa78bd4216
|
40 | — | — | — |
|
ACGCGTTCATGCATGACGCGTACCTGCACGGGTCCAAGCG
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:2135fd39468f
|
40 | — | — | — |
|
TTACCCCAGCCGACCACTGCCACGATCGATCATGCGTGAC
PANAPTA:O60663:LMX1B_PAX5:PRJEB66722:R3:b94215c41f53
|
40 | — | — | — |
SELEX rounds
R3 ·final