NKX2-3_TCF12
CAP-SELEX sample NKX2-3_TCF12 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
TCAAAGCCTGACCGAACACCTGTGTTTAATAACCATATGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:0314e213aa8f
|
40 | — | — | — |
|
ACGTTGCACCTGCGTACCCATGCAGCTGCGCCGATCATTC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:7ff97e3d196a
|
40 | — | — | — |
|
ACGCATCTGCTACCTCAGCGGTCGTCAGGTGCGATTACCG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:7dec69f339ae
|
40 | — | — | — |
|
ACCTGGCCATCTGCCAAATACTAAGTATGCGTACAGGTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:c06c07fc93bd
|
40 | — | — | — |
|
TCGCCGGCACACCTGCACACCCTAGCTTGACACGCAGGTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:99e8f2a07a73
|
40 | — | — | — |
|
GGCACTGACCTAACATGCCGGTGTCTAGGACAAAGTCTGC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:baf10045e906
|
40 | — | — | — |
|
AATATGGTGTGCACCTGTTATTGGCGTACGCACGTACAGC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:4915ed1a7d44
|
40 | — | — | — |
|
ACACCTGTTAGCGCATTTATTTCACAGGTGTGTCTAACTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:b4f78d9b91e7
|
40 | — | — | — |
|
TGACTAGCCAGGTGCACGCTATACTTTAACTGAGCACCTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:b12f6ad2cc0d
|
40 | — | — | — |
|
CGTAACGCACCTGGGCATAGCCACTAACAGGTGTGGTTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:5db45af776a9
|
40 | — | — | — |
|
TCACAACCTTCACGCCTCTCCACGACACAGGTGTGCACGA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:34e9fed5d18c
|
40 | — | — | — |
|
TGATCCAATGCACCTGTTACCATACTCTATCCGCACCTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:71d8ffa6f296
|
40 | — | — | — |
|
GCGTAGTCGAACTGAACAGGTGCACGGGCACACCTGTTCA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:10479a940e22
|
40 | — | — | — |
|
TATCACACCTGCGACTGGAGCAGCAGGTGCTCCTATTATG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:5c55c15d9230
|
40 | — | — | — |
|
AGATGTAATCACTAACGTAAACAGGTGTTAGCCAAATCGC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:349205822e4d
|
40 | — | — | — |
|
ACCACCTGTGCGTCCATCAATGCGCACCTGGCTTCTCGAT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:dadfa618626d
|
40 | — | — | — |
|
CTCACAGGTGTCCGCCACCCGATTATCACACCTGTATACA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:1d82ba9b6e37
|
40 | — | — | — |
|
AGCTGTCTTGTAAAGTGTCGAGTACCTGCGATTTAAAAAA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:471d50ba4d46
|
40 | — | — | — |
|
TGCCCCGCTCCTGCACACGCACCTGCCCACATCTGGACGG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:bd06e072d758
|
40 | — | — | — |
|
CCACGGACACAGGTGCTCCCACACCTGTGAAGGCACCAAG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:3f8d10150b07
|
40 | — | — | — |
|
ACAGGCGCGATCGCGTTTAATGTCTGAAGACATCGGACAT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:30c7ec09d002
|
40 | — | — | — |
|
GCCGCACCTGCGCACCGCTCAGTCCAAGCAGGTGAGGCGA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:8fac00efd5dc
|
40 | — | — | — |
|
TTTCCCGCACCTGTACTTCATGACAGGTGTGTCACAAGGA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:b5176ebc94df
|
40 | — | — | — |
|
CCGCCTCTAAAATCGCTAACCAAAACTCAAATGAAAAGCA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:b09f8c81bf1c
|
40 | — | — | — |
|
TAGCTTCAACACCTGTGATTAGACGTCGGAAATACAGGTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:0dabab200d6d
|
40 | — | — | — |
|
CTGAGCAGGTGCACCGGGTCGTTAGGTGCATCTGCACATT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:1098e8645c7d
|
40 | — | — | — |
|
TCTCACCGCGTGTTGGACCAGCTCGTATTTGCGCACCTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:f0c58fc571aa
|
40 | — | — | — |
|
CGGCCTCATAACTTCACCCGTTGCTCCTCTACTGCTACGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:3942b9c8c320
|
40 | — | — | — |
|
CGCGCGCCACCTGGACGCTAAACTGCAGGTGCTATACTTA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:3986d5804715
|
40 | — | — | — |
|
TCATCCACCACCTGTACATCGTGCTGCAGGTGTGTCGGAT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:5b95116dcc48
|
40 | — | — | — |
|
GAGGGATTACACCTGTGGCGCACCTGTGCGCTTTCCTCCC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:a3e04230a29c
|
40 | — | — | — |
|
TCATATTGTCGGACGGTACAGATGGCACGAATACACCTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:8f2643328870
|
40 | — | — | — |
|
ACCAACCGCACCTGTGACGCATCCAACAGGTGCCTTGGGA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:56ee67125c4f
|
40 | — | — | — |
|
TTCTGCACACTTCTCGCCCACACTTGCACCTGCGCCCACA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:08c7bd3b38ca
|
40 | — | — | — |
|
ACGGGAATACTCTTTAGGTAGCGTAGCTAGACAGGTGTTC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:0fb932b84d11
|
40 | — | — | — |
|
TACCCATCCTCACACCTGCGCCATCGCCACCGAACTCGTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:e91c29482e86
|
40 | — | — | — |
|
CACGTTAGCCACCAGGTGCTCCCTCTTTACACCTGGTAAC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:4da7b51226f6
|
40 | — | — | — |
|
TTGTTATTGTCCCTCACTTCACTCTCGGATTGCACCTGCG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:ba46a4655626
|
40 | — | — | — |
|
ATGATATTGCACAGGTGTCTACGCTAGCGGTACACCTGTG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:a0e14452b3f2
|
40 | — | — | — |
|
AAATGCAGGTGTGGGTCACCATACGCACCTGCATATACTA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:903d8fa3fb39
|
40 | — | — | — |
|
AACGAGCCAAGGTTAGCGCGTACCTAATTACCTAGGGTAC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:d190a71f4e83
|
40 | — | — | — |
|
CTGTCAAGGCCGACACCTGGAGTGCCCCCCAGGTGTGCCG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:99518df5a980
|
40 | — | — | — |
|
CGCCGACCGCACCTGCGCACTCGGTTGCCCAGCTGCGATC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:7b431b34a97a
|
40 | — | — | — |
|
GCCTACAGTGAACAGGTGCCCACTACTGACACCTGTTCAC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:da0a249ffaab
|
40 | — | — | — |
|
GAAAGTCATCTGACCACTGTCAGGTGCTTTTGACGTGTCG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:733a3ac00811
|
40 | — | — | — |
|
GCTAACTGAACGTAGCTGCACCCACGCACCTGGCGTTCGG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:2fe0587d7c8e
|
40 | — | — | — |
|
ACCTGTGTGACATCTGCAGTGGTGCAGGTGTTAAGTTTGT
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:fd1a4c691bcf
|
40 | — | — | — |
|
GGGATTTCTATGAACAGGTGTGGCATCCGTTCCACCGTGG
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:bb34849902d7
|
40 | — | — | — |
|
CAATGCACCCTTAAGACATTACATAAGAACGCACTGTATC
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:c0d920114827
|
40 | — | — | — |
|
GCCATTCTCGCCTGCTTACACAGTTTTAAATCCACGTGCA
PANAPTA:Q8TAU0:NKX2-3_TCF12:PRJEB66722:R3:ce01b57b2bcc
|
40 | — | — | — |
SELEX rounds
R3 ·final