NKX2-4_NR1D2
CAP-SELEX sample NKX2-4_NR1D2 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CTTTATATGGGCAAAATCGAAAACGAAAATTCATCATTAA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:3cc03c4e34b3
|
40 | — | — | — |
|
TAGGGGTATTGTAAAAACGAAAATGAAAATAGGAGCGACT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:fed41cc02682
|
40 | — | — | — |
|
ACTCCTTTCGCTTTCACTTTGTTACCGCGGAGCGAATCTA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:f24d8a20da03
|
40 | — | — | — |
|
TGATCGCAACCCCTTTGCTGTAATTGCCACTTTCGCTTTC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:d62b05d3089f
|
40 | — | — | — |
|
AAACACTATTGCAAGTGGGCTAATTTTCGATTTTCGGAAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:97003d309099
|
40 | — | — | — |
|
GGGATAATCACAACTTTCGGTTTCTGAATACGCTTTAGAT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:6ed85c853a0e
|
40 | — | — | — |
|
ATCCAAGTGTGATAAACGGAAAATAGCTTTCGATTTGCAG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:9071a567394f
|
40 | — | — | — |
|
CCCGTATTATAGTTTCGTTTTATCAACAAACAGAAACCGC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:70fc2980ba2c
|
40 | — | — | — |
|
ATTTAATAACCCGCAAATCGAAAGTATACTTAAGGAGTCC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:7aa950ec4040
|
40 | — | — | — |
|
GTCGCCGTAGTGTAGATGAAGGAACGAGAATACACAACTT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:02f700121b94
|
40 | — | — | — |
|
AACTTGCCTACACTATTGTGCACAATGAAAACGAAAGTAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:de78be37e299
|
40 | — | — | — |
|
GATTTGTATACTGAACAAAATGAAATCGAAATATTTGTAG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:2c95664e7a64
|
40 | — | — | — |
|
GGCACGAAGGGTAACAAATGTAATTCTGTCTCGTCTTATG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:474424fd6e71
|
40 | — | — | — |
|
GATTGAATCATACGATTAATCGAAACACAAACCGAAATTA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:2ad1e815dbf7
|
40 | — | — | — |
|
GTAAAGGAGTGACCGAAAACGAATTTGATACCTTTCGAGT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:5fd4bdef9805
|
40 | — | — | — |
|
AGGACGAAAGTCCCAAAGGGCGTAGACGCGTTTTCGTTAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:cfc5f9c562ed
|
40 | — | — | — |
|
CATTATTCCGTACTGAAAATGAAAGTGAAGATCCACCCGA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:11079c6701e1
|
40 | — | — | — |
|
TAACTCAATCACAACGCGCGACTAGGTTACTTTCGGTTTT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:9c3d29a60c14
|
40 | — | — | — |
|
TCAGGTCAGAAAAACGAAAGTAGTGTGCTAACTGTGCAAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:41f75168b661
|
40 | — | — | — |
|
AACTGAATCGAAACTGGCGCAAAAATGTATCGATTCGACG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:0593f1b6d576
|
40 | — | — | — |
|
GATTCTGAGAAGAAGGAAAAGAATACGAAAATGAAAGATC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:a2aacc972b7e
|
40 | — | — | — |
|
AGTTTCGAGTTAGGATTCGAAAGGAGGAGAAAATGATAAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:53bee625a7cc
|
40 | — | — | — |
|
TAAATCGAAAATAGTCTTGTATGTTTTCGGCACAAGTTTA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:7a349a73fca1
|
40 | — | — | — |
|
TTTCGCTTTCCAATCGAAATCCAACTCAGGAGAGAGTTGC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:ff7b32a68567
|
40 | — | — | — |
|
AAAGCTGCAAATCGAAACTATACCTGACTAGGGTGTACAC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:3c57888f5e80
|
40 | — | — | — |
|
TAGGAAGTAACAGAAACCGAAACATTACTAGAAAGTTAAA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:f7bce5f5bdc6
|
40 | — | — | — |
|
CCACCTAATCGAAATCGAAAACTAAACTATATCTAAGGTT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:630e00a74a84
|
40 | — | — | — |
|
GAGGTTTAGTGCGACAAGCATCCGAATCGAAAGTAAAAAT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:ed4a841d554f
|
40 | — | — | — |
|
ATGAACCTCGTAATCATTTTCTGTTTGCCTTCTAGCAGGT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:161c766cef8d
|
40 | — | — | — |
|
CGATGTTTTTAGTTTCAGTTTCGTATCCGATTCGAGTGTG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:b1b5d1ba8c5f
|
40 | — | — | — |
|
CGGCGAAGAGGAACCGAACATAGAAGAGAAGTTAAAAACG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:1509021f7cd5
|
40 | — | — | — |
|
CCGTGCGGAATGCTGTGCTTTCACCACCACATTTCCGATG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:b7c9f2785df2
|
40 | — | — | — |
|
ACCCTACCGCCCGTGCCTCTACATGAATCGCGTACCTATG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:6a3b2b559a94
|
40 | — | — | — |
|
AGTGGACTCGGAGGACGTCACTGGGTTAGTGTAACAAAGC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:8f1d587ab7e5
|
40 | — | — | — |
|
GCTGACGTACTTCACCCTCCTCTGAAGCTATGTTCCCCGT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:5dfc9a5e51ac
|
40 | — | — | — |
|
AAGTGGCTAGCAACAGCCACTTGTCCGAAGGTCTACCTAA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:83b82d2cb3ca
|
40 | — | — | — |
|
CCCATCGATCCCCATCTGACCTTGACCGTGATACAGACCT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:cba06fb46a4e
|
40 | — | — | — |
|
ACGTAGTTGAAACGAGTCTAGGCGCGAGGTCTTCCTCCAT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:091286fe78ec
|
40 | — | — | — |
|
ACCAAGTGCGCGATACTTGTTACGCACACTTGACATCGAT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:50ca26ff2d7c
|
40 | — | — | — |
|
ATAAGTGTCTCATCCACTTACCGTACGCCTTATAAGTGGT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:f25eb4f4cb22
|
40 | — | — | — |
|
CTCAAGTGGCAGGGACTTTATGTATCTACCATCTTGAGTC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:eee2102f3c9c
|
40 | — | — | — |
|
TCACGTACACGCATACCTCCCCCGCACCTTAACCCCCCGC
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:405d031d509e
|
40 | — | — | — |
|
TCAAGTGGCGGTAACCACTTCCCAGTACCTGGCGACTATG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:66b22dad8754
|
40 | — | — | — |
|
CTAACCACTCAACCTTTTGAGTGGTTCGACCCTGTATTTA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:ffe7e3d10ce8
|
40 | — | — | — |
|
TCTACTTGAGCATGCTTTCAAGTAGGAATGGCGGACTAGG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:edc0e568b19f
|
40 | — | — | — |
|
ACCATGTGAGGACGAGCTAAACGAGTAACACCCGCGCTAG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:c12373287c1e
|
40 | — | — | — |
|
TAAGTTGCGGGCGAAAATTTCGAAAATGAAAATTGAGCAT
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:8653cc1205ae
|
40 | — | — | — |
|
CGAACGAACATAAGTTGGGGCATTTTAGTAAACCTGGGTA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:247c81656895
|
40 | — | — | — |
|
CCAAGAGCTAACGAGCACTTAGGGCGTGTTGCCACTCAAG
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:ec541e722093
|
40 | — | — | — |
|
GCTGAGGTTTTCAGTAAGGTCCACTAGTTCGTATTTGTGA
PANAPTA:Q9H2Z4:NKX2-4_NR1D2:PRJEB66722:R3:4d3594b79053
|
40 | — | — | — |
SELEX rounds
R3 ·final