NKX6-1_PAX2
CAP-SELEX sample PAX2_NKX6-1 · 1 runs in PRJEB66722
Organism
—
Nucleic acid
DNA
Rounds available
R3
Selection-pool candidates
10,000
Top enriched selection-pool candidates
Candidate ranking reflects selection dynamics, not confirmed binding.
| Candidate sequence | Length | log2 FC | Class | Monotonicity |
|---|---|---|---|---|
|
CACTAATTGCTTTTTAATTGCGACTGTACCGCGATAATGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:2385b516af04
|
40 | — | — | — |
|
ATCGCTAATTGCTATTTAATTAGTCTGTTGTCCTGCTCTA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:3499e8929823
|
40 | — | — | — |
|
CAATTAAAAAGCCATTAACAGCTACTGCGCCTTGTGACGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:a296e25d91e6
|
40 | — | — | — |
|
GACTAATGGCTTTTTAATTACGTTCGATCAGTATCAACGG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:3455116db00b
|
40 | — | — | — |
|
TTACGAACGTGAATTTGCGCTAATTAATTAGCAATTAGTG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:31b610e5d027
|
40 | — | — | — |
|
TCCCCTCAGTTCAGATGGCATCTCGCTAATTGCTTTTTAA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:5be58fd2eae0
|
40 | — | — | — |
|
CCCCACCTCACTTCAGGTCATTAAAAACCAATTAGCCCCC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:297cd41a0d6d
|
40 | — | — | — |
|
GCAATTTGCATAATGACGATTTAATTACCTTACGTACAGT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:99bcc26cdeb3
|
40 | — | — | — |
|
AATGCGTTTTTAATTACCTTCCCAAAGTGGAGGCAGGCTG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:4513c00caaf2
|
40 | — | — | — |
|
AGATAATTGCTTTTTAATTACCACCCGTCTAGTAGACGAT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:be5eaff3f2f9
|
40 | — | — | — |
|
TGCAGTGCTAATTAAAAATCGATTAACGTAGACAGGCGTA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:abedebd61fab
|
40 | — | — | — |
|
GTCGTTAATGAGGATATAATTGCTTTTATTGTGTCGTTTA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:7ef802c5a1a9
|
40 | — | — | — |
|
CTCGTCACGCGCGAGCAGCTAGCTAATGAGGCGTATCACG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:d774a4e9e9ce
|
40 | — | — | — |
|
GCATGTACATCAATTATTTTCTCATTAGCGCGTCACTGGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:c23b4377c572
|
40 | — | — | — |
|
CATTAAATTGTCATTAGGCAGGATGCCTGCGGACCTTCTC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:79ac01118955
|
40 | — | — | — |
|
CAATTAAAAAGCAATTAAGTCCGCGCGCCAAGCAAATTAT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:44263c7ef004
|
40 | — | — | — |
|
CAGGCGCGTGGCATCCCGTTAATGAGCTTTTAATGACCAT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:5cc9d28d16ab
|
40 | — | — | — |
|
CCAATTAAAAACTCATTAACGCCACGACAACTCACATCTT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:882080f93b6b
|
40 | — | — | — |
|
CAGCCACTCATTATTTATCGATTATCCGTCCATTCATGCG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:e863111ad8ce
|
40 | — | — | — |
|
GCGTTCCGCTCACGATAATTGTTTTTTAATTACTAATGGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:f8c63bc839a9
|
40 | — | — | — |
|
TTACAGATTGCTCAAACGTCATTAAATCCCCATTAACGTG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:c69b0fac859e
|
40 | — | — | — |
|
CATTAAAAACCAATTACAGACGCGACGATCGAGCCTCAAC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:854d9e3902af
|
40 | — | — | — |
|
GGCTTATCACTAATTAAATAGCAATTAGTCGTGCCGCCCC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:59560d107d71
|
40 | — | — | — |
|
CAGCTTAATTACTTTTTAATTACCTCCAATCTTTACAGCC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:42f4eb92fba1
|
40 | — | — | — |
|
GGGGCAATTAATTCGCAATTAGCAAGCCTTCGTGAGTTAA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:d0514eb98d86
|
40 | — | — | — |
|
TTGCCTCCCGCATGCGCAATTAAAACGCAATTAACTCCAC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:c5226761b413
|
40 | — | — | — |
|
GGCCATAATTAAAAATCCATTAGCGATAGGTATCAAGGTA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:15bf17530aab
|
40 | — | — | — |
|
TCGCCTCCCCCTATTAAATACTCATTAACTCGTTAACACG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:06a84dd3269c
|
40 | — | — | — |
|
CGCAAGCTAATGAGGATTTAATTAGTTTTGGGAGACGCAG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:4d6c2eaa7f44
|
40 | — | — | — |
|
ACCCGCCTCATTAAAAGCTCATTAAGGTCGTACTCCATGT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:58f196fadee7
|
40 | — | — | — |
|
CATTATCAAACGTAATTAATTTCCCATTAGCTTACAACCG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:31527146f6c0
|
40 | — | — | — |
|
AATTAAAAAGTCATTAAGTGGTACATAAATTAGCGACGTT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:650444b780cf
|
40 | — | — | — |
|
CCATCATTCGCCACGCTTGACCGCCCACGCCACGACTGAA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:8312302cc2e6
|
40 | — | — | — |
|
CATCAAATTGTAATTAGCTGCCGACGTGGCTCACTGAATT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:3d517afa3e4c
|
40 | — | — | — |
|
CTAACAGCAATTAATTCGCCATTAACTATGTCACGGTCGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:b3c6de9798d9
|
40 | — | — | — |
|
ATTCCTCCTACGTTGCGCTAATTGCTTAATAATGACCTGC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:e052ccc4414e
|
40 | — | — | — |
|
AATTAAATACTCATTAGTCTCTACGGCCTTCCTCGTGTAC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:938d28a2ad1c
|
40 | — | — | — |
|
CTAATTACTTTTTAATTGCTCGTTACGCTGCCCTGCCCAT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:579c9db075d5
|
40 | — | — | — |
|
CATTAAAAACTAATTAGCGCGCTTTCGGGGATCGCTACTA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:cd50e882d35e
|
40 | — | — | — |
|
ACCAAATACGTTAATTGCATTTTAATTGATATCCCAGGAA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:8e29dca10b57
|
40 | — | — | — |
|
ATTAAAAACCGATTAACGTAACTATCGCAACCGTGGCCGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:247920a4b80b
|
40 | — | — | — |
|
GGATCCTCGCCGTTTCTAAACCACTCTCGCCACGCATGAC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:ab9efcaadddf
|
40 | — | — | — |
|
ATGCCGTGTACCCCTCATAATTGCTTTTTAATGGGCTGGC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:4d88085f1288
|
40 | — | — | — |
|
TAATGAGTATTTAATTACAGCATGCTTTGTTAACTAACAC
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:c35295f69837
|
40 | — | — | — |
|
GGATGAGGCATACTAACCTTAATGCATTTTTAATTACACT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:070b68abea7c
|
40 | — | — | — |
|
CATTATAAAGCAATTACCGTTCGCCATATTGACGGCGCCT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:63b91c1386f5
|
40 | — | — | — |
|
GCGGATCACGCGTAGTGGCCGTATTAAATAGCAATTAGCG
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:a5171d4541d0
|
40 | — | — | — |
|
CATTAAATTGTCATTATCTATTCAACATGCCAGCTTTCGA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:6501ad858355
|
40 | — | — | — |
|
GTTTTAATGTGCCTTTATATGCAATTAAAAAGCCATTAAA
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:f969909da285
|
40 | — | — | — |
|
GCGCAGGGCAATTATTTAGCAATTAGGCATTGTCTCTGAT
PANAPTA:P78426:NKX6-1_PAX2:PRJEB66722:R3:5c7e637b39dd
|
40 | — | — | — |
SELEX rounds
R3 ·final